BAC Information

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BAC

Clone NameB6Ng01-138D05
Chromosome10 (Build37)
Map Location 25,793,892 - 25,877,979
singlet/doubletdoublet
Overlap geneC030003D03Rik, LOC100040851, LOC15352
Upstream geneAkap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697
Downstream geneSamd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138D05.bB6Ng01-138D05.g
ACCDH937526DH937527
length1,0651,035
definitionDH937526|Mus musculus domesticus DNA, BAC clone: B6Ng01-138D05, 5' end.DH937527|Mus musculus domesticus DNA, BAC clone: B6Ng01-138D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,793,892 - 25,794,983)(25,876,901 - 25,877,979)
sequence
gaattcccatggctttgggcaccagacttgcctaagcgcaaaggacacat
ctctgcgtaggcgaaagcaattatacctagtaacaaattcattgttttga
cctggaacatcattagccttcttgaaccacttctctgtgatcttcctaga
actgtctgtcaaggatgagacagcctcctccttcccatcagaatgctacc
aaaaccctcacacagaaagagtcgggcacagatcctatcccaggctgcca
tagaacactccctatcatacacaggaactcatgctgtggccctgaaaacc
cagcaaccacagaatccttcaaaaggagtataaatgggaccggaaagaga
caggatcttcctttcttatggatcccatgttaggtttggacctattgaca
gcaaccattcccttcacataggaagaccttaggataagtctgacccagag
agaaatggagctgagagatgaggagagaaaggatccagacaaagttggtt
cctccagcacctgaagtagatctacctaaaggtggctctaaagaccttcc
attcacatcagccaccaagccctttattgctaatccagtctcatgtacac
ataattaaatgcatccttgaccaaccaacagaaaccctgacagaagtgaa
tacagagggacctggcatcctctgcacaaatgatgatcagaataggctta
gccatggtactgcaggaaggcatctaagattcctcatcttttgactctgc
tacattcctgggttttctttgtaatttcccctctggttataaagtttcca
aagaataacttgctcttatatatcctaccaacagtgccttggcccaaagg
tcctcccctctacatacttcttgtagccatttcctttttttttctttttt
tttttcaacagggcactcagaattcttagagaagtcttgtcaagaactca
gtgacatgcaacttccactcagaaaggaggggtgttagttgagagaaaat
ggagcacagatcaccgaggtcagatcaggcatctcgagttcccactgcat
aatttatatttgtct
gaattcttttctttttttctttcttttttttttttttttttggtttttca
agacagggtttctctgtatagccctggctgtcctggaactgaatctcatt
ggctgtttgtatgctttagtttttaagcagaactcttaattatccatctc
agaagtgcctgcagaatatattattaattttaattttctcacttattaat
tttctctggagtaagagtggtctaggtttcaacccttctcccattaaaaa
accttggaagacttggaaaatatttaaagtatgtttagaaagcccatagt
ttggacaaaggaaacgaaagcaatgtgtttttaaaatcagagtttcatac
ttttaaagtagttgtttgctttgaacaattctttctcttctttaatttca
atttagattacccgaagggtggaatacatttgcatattggactgtgaagg
gctttgatccttctttgcaactgtgagaaatctcttctgagtcttgaaga
aaccttttaaaagagagtcgttagactgctctaaagttatcctttaatag
tcaccttatatgtatttttcgaaaacaaatctactgtgtttctagttagt
attgtttttctttacaaagccatttagactcttcaaaaaggagaattaat
atttaagcaccaagggaataccttgtaagtctttctttaatattgtttgg
tattcaacgacaacaaaaagctattactcattaccagcacaaacttgtta
ctatttctagttttaaagatagtttttggtatttgcaaagacttatttga
ttttttttttgtttttgtgatgtgaatgctcaaaatcatactacaccccc
aatttttggttatgtaaaaggttgtatagcgtagcctgaatgtttccaac
tacagtacattcccttcatagcacaacacatcaacatgctgtcagaggta
tatagtatatcctatgatagtattatctctagtgaagtgcatcaacgata
gaatattagcagtatgagcgactcttgaagcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25793892_25794983
seq2: B6Ng01-138D05.b_48_1112

seq1  GAATTCCCATGGCTTTGGGCACCAGACTTGCCTAAGCGCAAAGGACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGCTTTGGGCACCAGACTTGCCTAAGCGCAAAGGACACAT  50

seq1  CTCTGCGTAGGCGAAAGCAATTATACCTAGTAACAAATTCATTGTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGTAGGCGAAAGCAATTATACCTAGTAACAAATTCATTGTTTTGA  100

seq1  CCTGGAACATCATTAGCCTTCTTGAACCACTTCTCTGTGATCTTCCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACATCATTAGCCTTCTTGAACCACTTCTCTGTGATCTTCCTAGA  150

seq1  ACTGTCTGTCAAGGATGAGACAGCCTCCTCCTTCCCATCAGAATGCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGTCAAGGATGAGACAGCCTCCTCCTTCCCATCAGAATGCTACC  200

seq1  AAAACCCTCACACAGAAAGAGTCGGGCACAGATCCTATCCCAGGCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTCACACAGAAAGAGTCGGGCACAGATCCTATCCCAGGCTGCCA  250

seq1  TAGAACACTCCCTATCATACACAGGAACTCATGCTGTGGCCCTGAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACTCCCTATCATACACAGGAACTCATGCTGTGGCCCTGAAAACC  300

seq1  CAGCAACCACAGAATCCTTCAAAAGGAGTATAAATGGGACCGGAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACAGAATCCTTCAAAAGGAGTATAAATGGGACCGGAAAGAGA  350

seq1  CAGGATCTTCCTTTCTTATGGATCCCATGTTAGGTTTGGACCTATTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTTCCTTTCTTATGGATCCCATGTTAGGTTTGGACCTATTGACA  400

seq1  GCAACCATTCCCTTCACATAGGAAGACCTTAGGATAAGTCTGACCCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCATTCCCTTCACATAGGAAGACCTTAGGATAAGTCTGACCCAGAG  450

seq1  AGAAATGGAGCTGAGAGATGAGGAGAGAAAGGATCCAGACAAAGTTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGAGCTGAGAGATGAGGAGAGAAAGGATCCAGACAAAGTTGGTT  500

seq1  CCTCCAGCACCTGAAGTAGATCTACCTAAAGGTGGCTCTAAAGACCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCACCTGAAGTAGATCTACCTAAAGGTGGCTCTAAAGACCTTCC  550

seq1  ATTCACATCAGCCACCAAGCCCTTTATTGCTAATCCAGTCTCATGTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATCAGCCACCAAGCCCTTTATTGCTAATCCAGTCTCATGTACAC  600

seq1  ATAATTAAATGCATCCTTGACCAACCAACAGAAACCCTGACAGAAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAATGCATCCTTGACCAACCAACAGAAACCCTGACAGAAGTGAA  650

seq1  TACAGAGGGACCTGGCATCCTCTGCACAAATGATGATCAGAATAGGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGGACCTGGCATCCTCTGCACAAATGATGATCAGAATAGGCTTA  700

seq1  GCCATGGTACTGCAGGAAGGCATCTAAGATTCCTCATCTTTTGACTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGTACTGCAGGAAGGCATCTAAGATTCCTCATCTTTTGACTCTGC  750

seq1  TACATTCCTGGGTTTTCTTTGTAATTTCCCCTCTGGTTATAAAGTTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCCTGGGTTTTCTTTGTAATTTCCCCTCTGGTTATAAAGTTTCCA  800

seq1  AAGAATAACTTGCTCTTATATATCCTACCAACAGTGCCTTGGCCCAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAACTTGCTCTTATATATCCTACCAACAGTGCCTTGGCCCAAAGG  850

seq1  TCCTCCCCTCTACATACTTCTTTGTAGCCATTTCCTTTTTTTTTTTTTTT  900
      |||||||||||||||||||| ||||||||||||||       ||||||||
seq2  TCCTCCCCTCTACATACTTC-TTGTAGCCATTTCC-------TTTTTTTT  892

seq1  TTTTTTTTTTTTTTAACAGGGCACTCAGAATTCTTAGAGAAGTCTTGTCA  950
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTCAACAGGGCACTCAGAATTCTTAGAGAAGTCTTGTCA  942

seq1  AGAACTCAGTGACATGCAACTTCCCACTCAGGAAAGGGAGGGGTGTTAAG  1000
      |||||||||||||||||||||| ||||||||  || ||||||||||| ||
seq2  AGAACTCAGTGACATGCAACTT-CCACTCAG--AAAGGAGGGGTGTT-AG  988

seq1  TTGAAGAGGAAACAGGAGCAACCAGATTCAACCCAAAGGTCAGAATCCAA  1050
      ||| ||| ||||  ||||||  |||||    | |  ||||||| |||  |
seq2  TTG-AGA-GAAAATGGAGCA--CAGAT----CACCGAGGTCAG-ATC--A  1027

seq1  GCCATCTCAGAGGTTCTCAACTGCATAATTATATATTTGTCT  1092
      | |||||| || |||| | ||||||||||| |||||||||||
seq2  GGCATCTC-GA-GTTC-CCACTGCATAATT-TATATTTGTCT  1065

seq1: chr10_25876901_25877979
seq2: B6Ng01-138D05.g_67_1101 (reverse)

seq1  ACATGCCCTTTCAAGAGTCGCTTTCCAATAAACTTGCCTTTAATATATTC  50
      ||||||   |||||||||||||     |||    |||   ||  ||||||
seq2  ACATGC---TTCAAGAGTCGCT----CATA---CTGC---TA--ATATTC  35

seq1  TAATCTGGTTTGATTGGCACCTTTCACTAGGAGATAAATAACCTATCATA  100
      | |||    |||||  ||||  ||||||| ||||| ||||  ||||||||
seq2  T-ATC---GTTGAT--GCAC--TTCACTA-GAGAT-AATA--CTATCATA  73

seq1  GGGATTAATTACCTATATACCCTCCTGACAGGCAATGGTTGGATTGTGGT  150
      ||     ||   |||||||||   |||||| |||   ||||   ||| ||
seq2  GG-----ATATACTATATACC--TCTGACA-GCA--TGTTG--ATGT-GT  110

seq1  TGTTGGCTATTGGAAGGGAAATGTACTGTAGTTGGAAACATTCAGGCTAC  200
      |||  |||||  |||||| |||||||||||||||||||||||||||||||
seq2  TGT--GCTAT--GAAGGG-AATGTACTGTAGTTGGAAACATTCAGGCTAC  155

seq1  GCTATACAACCTTTTACATAACCAAAAATT-GGGGTGTAGTATGATTTTG  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCTATACAACCTTTTACATAACCAAAAATTGGGGGTGTAGTATGATTTTG  205

seq1  AGCATTCACATCACAAAAACAAAAAAAAAATCAAATAAGTCTTTGCAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACATCACAAAAACAAAAAAAAAATCAAATAAGTCTTTGCAAAT  255

seq1  ACCAAAAACTATCTTTAAAACTAGAAATAGTAACAAGTTTGTGCTGGTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAACTATCTTTAAAACTAGAAATAGTAACAAGTTTGTGCTGGTAA  305

seq1  TGAGTAATAGCTTTTTGTTGTCGTTGAATACCAAACAATATTAAAGAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATAGCTTTTTGTTGTCGTTGAATACCAAACAATATTAAAGAAAG  355

seq1  ACTTACAAGGTATTCCCTTGGTGCTTAAATATTAATTCTCCTTTTTGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAAGGTATTCCCTTGGTGCTTAAATATTAATTCTCCTTTTTGAAG  405

seq1  AGTCTAAATGGCTTTGTAAAGAAAAACAATACTAACTAGAAACACAGTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAATGGCTTTGTAAAGAAAAACAATACTAACTAGAAACACAGTAG  455

seq1  ATTTGTTTTCGAAAAATACATATAAGGTGACTATTAAAGGATAACTTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTCGAAAAATACATATAAGGTGACTATTAAAGGATAACTTTAG  505

seq1  AGCAGTCTAACGACTCTCTTTTAAAAGGTTTCTTCAAGACTCAGAAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTAACGACTCTCTTTTAAAAGGTTTCTTCAAGACTCAGAAGAGA  555

seq1  TTTCTCACAGTTGCAAAGAAGGATCAAAGCCCTTCACAGTCCAATATGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACAGTTGCAAAGAAGGATCAAAGCCCTTCACAGTCCAATATGCA  605

seq1  AATGTATTCCACCCTTCGGGTAATCTAAATTGAAATTAAAGAAGAGAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTCCACCCTTCGGGTAATCTAAATTGAAATTAAAGAAGAGAAAG  655

seq1  AATTGTTCAAAGCAAACAACTACTTTAAAAGTATGAAACTCTGATTTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCAAAGCAAACAACTACTTTAAAAGTATGAAACTCTGATTTTAA  705

seq1  AAACACATTGCTTTCGTTTCCTTTGTCCAAACTATGGGCTTTCTAAACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATTGCTTTCGTTTCCTTTGTCCAAACTATGGGCTTTCTAAACAT  755

seq1  ACTTTAAATATTTTCCAAGTCTTCCAAGGTTTTTTAATGGGAGAAGGGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAATATTTTCCAAGTCTTCCAAGGTTTTTTAATGGGAGAAGGGTT  805

seq1  GAAACCTAGACCACTCTTACTCCAGAGAAAATTAATAAGTGAGAAAATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTAGACCACTCTTACTCCAGAGAAAATTAATAAGTGAGAAAATTA  855

seq1  AAATTAATAATATATTCTGCAGGCACTTCTGAGATGGATAATTAAGAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATAATATATTCTGCAGGCACTTCTGAGATGGATAATTAAGAGTT  905

seq1  CTGCTTAAAAACTAAAGCATACAAACAGCCAATGAGATTCAGTTCCAGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAAAAACTAAAGCATACAAACAGCCAATGAGATTCAGTTCCAGGA  955

seq1  CAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCAAAAAAAAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCAAAAAAAAAAA  1005

seq1  AAAAAAAGAAAGAAAAAAAGAAAAGAATTC  1079
      ||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAGAAAAAAAGAAAAGAATTC  1035