BAC Information

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BAC

Clone NameB6Ng01-138D20
Chromosome10 (Build37)
Map Location 100,940,045 - 100,941,076
singlet/doubletsinglet
Overlap genenone
Upstream geneTmtc3, 4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c, LOC667652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138D20.g
ACCDH937556
length1,112
definitionDH937556|Mus musculus domesticus DNA, BAC clone: B6Ng01-138D20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctcgtgtatacttaaactctgtagtttacttgcggagggaatt
cacccctgaatctgagcttaatcctggacctggcacctgatcataatgtg
gaacctctggatgggaactgtcccccaccccttgccagcactgttttacg
tcttcggggcccctgtcgggatagttaccggcgtaatactactgtaaaat
atttgttattacaaagtgtttagaggtgaggggagggagcagatttgata
caatacaatgatgtttaagccaaaatcacattccatttataatatggcga
ccaaaatgtaatagctccttaaatactctgagaaaaaataacagatgcgt
atgcttaccttaaaatgcgtcccagctttgacaaaggtaaaaaaagcacc
cctgtcatagatgacaagtgtgatttttgttcataaatggaaaactattt
ataaataatgttgaagcagaaattttctaaacataattaaggaaagagat
ttcccgtatttcacctatattgtcatagccttttggttgtacgagagtca
caatttttttcctcgctatttctgattatcttaagtaatcttattattgc
tggctaattgttctgtgactttcatgtaactacagaaataaaaggtgtag
tgaagaaaagagacacaggcaagttgattcacttcacatattcttttcta
tttcagaaagctaacatgtctctctgtagaatctggaaggcatttaggca
gctttttaaacatggtatcttatttcagttgacctttctacttttccaac
aataccatgattcattttttttgttttatttttcttctatgtgtttggtt
atttttgtttgcatgtagatatgtgcaccatgtgcaatagataccttaga
agttgagttacagatagttgtgtactgccatgtggctgctgggaattgaa
tacaggtcctctagtgagtaggtagtgctttaaaggctgagcaatctctc
cagccccaatctaattattttaaaggatgtgtatatctgagtctgagtat
aactggtggcctctgcaccaggttactgttgagacagaaaatggatgcaa
gtattctggagt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100940045_100941076
seq2: B6Ng01-138D20.g_154_1173 (reverse)

seq1  ACTCCAGAATACTTTGCAT-CATTTTCTGGTCTCAACAGGTACCTGTGTG  49
      |||||||||||| |||||| |||||||| ||||||||||  ||||| |||
seq2  ACTCCAGAATAC-TTGCATCCATTTTCT-GTCTCAACAGTAACCTG-GTG  47

seq1  CATGAGGCACACAGTTATAACTACAGACTCAGATATACACATACATTAAA  99
      || |||||   ||||||| ||| ||||||||||||||||||| | ||  |
seq2  CA-GAGGCCACCAGTTAT-ACT-CAGACTCAGATATACACATCCTTT--A  92

seq1  AAATAATTAGATTGGGGCTGGAGAGATTGCTCAGCCTTTAAAAGCACTAC  149
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAATAATTAGATTGGGGCTGGAGAGATTGCTCAGCCTTT-AAAGCACTAC  141

seq1  CTACTCCACTAGAGGACCTGTATTCAATTCCCAGCAGCCACATGGCAGTA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACT-CACTAGAGGACCTGTATTCAATTCCCAGCAGCCACATGGCAGTA  190

seq1  CACAACTATCTGTAACTCAACTTCTAAGGTATCTATTGCACATGGTGCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTATCTGTAACTCAACTTCTAAGGTATCTATTGCACATGGTGCAC  240

seq1  ATATCTACATGCAAACAAAAATAACCAAACACATAGAAGAAAAATAAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACATGCAAACAAAAATAACCAAACACATAGAAGAAAAATAAAAC  290

seq1  AAAAAAAATGAATCATGGTATTGTTGGAAAAGTAGAAAGGTCAACTTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAAAAAATGAATCATGGTATTGTTGGAAAAGTAGAAAGGTCAAC-TGAA  339

seq1  ATAAGATACCATGTTTAAAAAGCTGCCTAAATGTATACCATATTTTAAAG  399
      |||||||||||||||||||||||||||||||||  | ||| ||| || ||
seq2  ATAAGATACCATGTTTAAAAAGCTGCCTAAATGCCTTCCAGATTCTACAG  389

seq1  AGTTATATGTTGGCTTTCAGGAATAGAAAAGAATCTGTTAAGTGAATCAA  449
      ||  | ||||| |||||| | ||||||||||||| ||| |||||||||||
seq2  AGAGACATGTTAGCTTTCTGAAATAGAAAAGAATATGTGAAGTGAATCAA  439

seq1  CTTGCCT-TGTCTCTTTTCTTCACTACACCTTTTATTGTGTGTAGTTACA  498
      ||||||| ||||||||||||||||||||||||||||| | ||||||||||
seq2  CTTGCCTGTGTCTCTTTTCTTCACTACACCTTTTATT-TCTGTAGTTACA  488

seq1  TGAAAGTCACAGAACAATTAGCCAGCAAAAATAAAATTACTTAAAATAAT  548
      |||||||||||||||||||||||||||| ||||| ||||||||| |||||
seq2  TGAAAGTCACAGAACAATTAGCCAGCAATAATAAGATTACTTAAGATAAT  538

seq1  CAGAAATATCGAGGAAAAAAATTGTGACTCTCGTACAACCAAAAGGCTAT  598
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAGCGAGGAAAAAAATTGTGACTCTCGTACAACCAAAAGGCTAT  588

seq1  GACAATATAGGTGAAATATGGGAAATCTCTTTCCTTTATTCTGTTTTGCT  648
      |||||||||||||||||| ||||||||||||||||| ||| ||||| |  
seq2  GACAATATAGGTGAAATACGGGAAATCTCTTTCCTTAATTATGTTTAGAA  638

seq1  TATTTCTGCTTCAACATTATTTATAAATAGTTTTCCATTTATGAACAAAA  698
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGCTTCAACATTATTTATAAATAGTTTTCCATTTATGAACAAAA  688

seq1  ATCACACTTGTCATTTAAGACAGCGGTGCTTTTCTTACTTTTGTCAATGT  748
      |||||||||||||| || ||||| ||||||||| |||| |||||||| | 
seq2  ATCACACTTGTCATCTATGACAGGGGTGCTTTTTTTACCTTTGTCAAAGC  738

seq1  TCGGCTGTATCTTTAACTCTACATATGCATCTGTTATTTTTACTCAGAGT  798
      | ||  | || || |  |   |||| ||||||||||||||| ||||||||
seq2  TGGGACGCATTTTAAGGTAAGCATACGCATCTGTTATTTTTTCTCAGAGT  788

seq1  ATTTAAGGAGTTATTACATTTTGGTCACCATATTATAAATGGAATGTGAT  848
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  ATTTAAGGAGCTATTACATTTTGGTCGCCATATTATAAATGGAATGTGAT  838

seq1  TTTGGCTTAAACATCATTGTATTGTATCAAATCTGCTCCCTCCCCTCACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGGCTTAAACATCATTGTATTGTATCAAATCTGCTCCCTCCCCTCAC-  887

seq1  ATTTAAACACTTTGTAATAATTAATATTTTACAGTAGTATTATGCCTGTA  948
       | |||||||||||||||||  |||||||||||||||||||| ||| |||
seq2  CTCTAAACACTTTGTAATAACAAATATTTTACAGTAGTATTACGCCGGTA  937

seq1  AATATCCCAACAATTGCCTTGAAGAAGTACTAGTTTTGCTGTGTTATTTT  998
      | |||||| |||   |||  ||||| |||  |    |||||        |
seq2  ACTATCCCGACAGGGGCCCCGAAGACGTA-AAACAGTGCTGGCAAGGGGT  986

seq1  GGTAGACAGTTCCCATCCAGTGGTTCCACATTAT  1032
      ||  |||||||||||||||| |||||||||||||
seq2  GGGGGACAGTTCCCATCCAGAGGTTCCACATTAT  1020