BAC Information

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BAC

Clone NameB6Ng01-138G22
Chromosome10 (Build37)
Map Location 100,151,178 - 100,223,901
singlet/doubletdoublet
Overlap genenone
Upstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138G22.bB6Ng01-138G22.g
ACCDH937695DH937696
length1,125408
definitionDH937695|Mus musculus domesticus DNA, BAC clone: B6Ng01-138G22, 5' end.DH937696|Mus musculus domesticus DNA, BAC clone: B6Ng01-138G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,151,178 - 100,152,318)(100,223,488 - 100,223,901)
sequence
gaattcactttgtagtccatgatgaactctgactcttgtagatgtgcctg
cctctgctttccacatgctgggacaaaaggtgtgcctgcccacaccagct
caaagagaagcttcttagagatgggatgatagtaacacttacctatgagc
acaaggatgagtatttagaacgcagttagcaattatgctggtttcgtaag
gtgatagtagtaggctctcctctaagatctattttgtcttttttcgtttc
ataagtttcatttcttgatttttcttttcaaatggtctgacttgcagaag
aatacttattattccataatatagaactggttcccataggggtactatct
atttctcctatctctggctcatgcccatggcacttgcctgtctaaagaaa
tcctggcagacttctcagagtgatgccctttaattcttgataaataatcc
ctgaagtgtagaaagttatatcttctctctatttgctcccaggtgcactg
tatttgacagatatttttctccatttgcattttacatttgcagcttttat
ttaatggatgagcctataatttctgattctgtattttggtggagtttcag
gttggatgcgaagagcaaaaccgattacttttctgcagctaattattgca
acaagtcttctgcatcaatttttcaaaagctgagaaaaaatatggcatgt
gaattttggtttcttttctttcactacatttccatatcaaatatgctgat
ttttttcctgcataacttgggcttatcaatgtcacaaaaggttgcagaaa
gtagaggagttgaaactgaataagggcacacaggaattcataatgctgtt
tgttgctgccctgtacatatttataaatttctaaagtaaagaaataggta
tctgtcaactttgaactttaaaagctatttgctcaaagtctcatttttac
acagatttgatattattttttgtgatatgatgcacacatattatgtccac
aagagatactacattctctccctctgctcactgcacatttcttctgtctg
tctttctgtctcagaaagatttagtgccctctttatgggtttgacaacac
aggataaatctattggcatatttat
ttcttggcattagcaaatataaggttggtaaagttatatacaacctcttg
gtctaatatatggagtgtatgtgtctgtgtgtgtgtatgtgcgtgtgtct
gtgtgtgtgtgtgtatttatgcagagagagagagagacagagagagagaa
gaaagttaaaattggttactacaagtaaaaatggctttgaacaataagtc
tatcaataaagcactcccatgaggacttggatatcagtaataaaaaacat
taatctacgaaatttcatttcaatgcatattgtagttgtgattgtgagac
tggtctgtgagcttgcaattgttttaaacatgcaatcatatgagcagact
aacatgtgtgaccagggtaaatatctgtacctagacttacctaatccaaa
ttgattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100151178_100152318
seq2: B6Ng01-138G22.b_47_1171

seq1  GAATTCACTTTGTAGTCCATGATGAACTCTGACTCTTGTAGATGTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGTCCATGATGAACTCTGACTCTTGTAGATGTGCCTG  50

seq1  CCTCTGCTTTCCACATGCTGGGACAAAAGGTGTGCCTGCCCACACCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTTTCCACATGCTGGGACAAAAGGTGTGCCTGCCCACACCAGCT  100

seq1  CAAAGAGAAGCTTCTTAGAGATGGGATGATAGTAACACTTACCTATGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAAGCTTCTTAGAGATGGGATGATAGTAACACTTACCTATGAGC  150

seq1  ACAAGGATGAGTATTTAGAACGCAGTTAGCAATTATGCTGGTTTCGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGATGAGTATTTAGAACGCAGTTAGCAATTATGCTGGTTTCGTAAG  200

seq1  GTGATAGTAGTAGGCTCTCCTCTAAGATCTATTTTGTCTTTTTTCGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGTAGTAGGCTCTCCTCTAAGATCTATTTTGTCTTTTTTCGTTTC  250

seq1  ATAAGTTTCATTTCTTGATTTTTCTTTTCAAATGGTCTGACTTGCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTCATTTCTTGATTTTTCTTTTCAAATGGTCTGACTTGCAGAAG  300

seq1  AATACTTATTATTCCATAATATAGAACTGGTTCCCATAGGGGTACTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTATTATTCCATAATATAGAACTGGTTCCCATAGGGGTACTATCT  350

seq1  ATTTCTCCTATCTCTGGCTCATGCCCATGGCACTTGCCTGTCTAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCTATCTCTGGCTCATGCCCATGGCACTTGCCTGTCTAAAGAAA  400

seq1  TCCTGGCAGACTTCTCAGAGTGATGCCCTTTAATTCTTGATAAATAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCAGACTTCTCAGAGTGATGCCCTTTAATTCTTGATAAATAATCC  450

seq1  CTGAAGTGTAGAAAGTTATATCTTCTCTCTATTTGCTCCCAGGTGCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTGTAGAAAGTTATATCTTCTCTCTATTTGCTCCCAGGTGCACTG  500

seq1  TATTTGACAGATATTTTTCTCCATTTGCATTTTACATTTGCAGCTTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACAGATATTTTTCTCCATTTGCATTTTACATTTGCAGCTTTTAT  550

seq1  TTAATGGATGAGCCTATAATTTCTGATTCTGTATTTTGGTGGAGTTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGATGAGCCTATAATTTCTGATTCTGTATTTTGGTGGAGTTTCAG  600

seq1  GTTGGATGCGAAGAGCAAAACCGATTACTTTTCTGCAGCTAATTATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATGCGAAGAGCAAAACCGATTACTTTTCTGCAGCTAATTATTGCA  650

seq1  ACAAGTCTTCTGCATCAATTTTTCAAAAGCTGAGAAAAAATATGGCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTTCTGCATCAATTTTTCAAAAGCTGAGAAAAAATATGGCATGT  700

seq1  GAATTTTGGTTTCTTTTCTTTCACTACATTTCCATATCAAATATGCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGTTTCTTTTCTTTCACTACATTTCCATATCAAATATGCTGAT  750

seq1  TTTTTTCCTGCATAACTTGGGCTTATCAATGTCACAAAAGGTTGCAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTTTCCTGCATAACTTGGGCTTATCAATGTCACAAAAGGTTGCAGAAA  800

seq1  GTAGAGGAGTTGAAACTGAATAAGGGCACACAGGAATTCATAATGCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGAGTTGAAACTGAATAAGGGCACACAGGAATTCATAATGCTGTT  850

seq1  TGTTGCTGCCCTGTACATATTTATAAATTTCTAAAGTAAAGAAATAGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGCCCTGTACATATTTATAAATTTCTAAAGTAAAGAAATAGGTA  900

seq1  TCTGTCAACTTTGAACTTTAAAAAGCTATTTGCCCAAAGTCTCATTTTTA  950
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TCTGTCAACTTTGAACTTT-AAAAGCTATTTGCTCAAAGTCTCATTTTTA  949

seq1  CACAGATTTGATATTAATTTTTTGTGATATTGAATGCACACATATTATGT  1000
      ||||||||||||||| ||||||||||||||   |||||||||||||||||
seq2  CACAGATTTGATATT-ATTTTTTGTGATAT--GATGCACACATATTATGT  996

seq1  CCACCAAAGAGATACCTACATTCTCTCCCTCTGCTCACTGCACATTTCTT  1050
      ||||  |||||||| |||||||||||||||||||||||||||||||||||
seq2  CCAC--AAGAGATA-CTACATTCTCTCCCTCTGCTCACTGCACATTTCTT  1043

seq1  CTGTCTGTCTTTCTGTCCTCAGACAGATTTAGGGTGCCACTC-TTATGGT  1099
      |||||||||||||||| |||||| |||||||  ||||| ||| |||||  
seq2  CTGTCTGTCTTTCTGT-CTCAGAAAGATTTA--GTGCC-CTCTTTATG--  1087

seq1  GTTTTGACAACACAGATAAAATCTATTTTGGGCATAATTTAT  1141
      | |||||||||||||   |||||||||   ||||| ||||||
seq2  GGTTTGACAACACAGGATAAATCTATT---GGCAT-ATTTAT  1125

seq1: chr10_100223488_100223901
seq2: B6Ng01-138G22.g_64_477 (reverse)

seq1  AGAATCAATTTGGTTTGGGTAAGTCTAGGTACAGATATTTACCCTGGTCA  50
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  AGAATCAATTTGGATTAGGTAAGTCTAGGTACAGATATTTACCCTGGTCA  50

seq1  CACATGTTAGTCTGCTCATATGATTGCATGTTTAAAACAATTGCAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTTAGTCTGCTCATATGATTGCATGTTTAAAACAATTGCAAGCTC  100

seq1  ACAGACCAGTCTCACAATCACAACTACAATATGCATTGAAATGAAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCAGTCTCACAATCACAACTACAATATGCATTGAAATGAAATTTC  150

seq1  GTAGATTAATGTTTTTTATTACTGATATCCAAGTCCTCATGGGAGTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTAATGTTTTTTATTACTGATATCCAAGTCCTCATGGGAGTGCTT  200

seq1  TATTGATAGACTTATTGTTCAAAGCCATTTTTACTTGTAGTAACCAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAGACTTATTGTTCAAAGCCATTTTTACTTGTAGTAACCAATTT  250

seq1  TAACTTTCTTCTCTCTCTCTGTCTCTCTCTCTCTCTGCATAAATACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCTTCTCTCTCTCTGTCTCTCTCTCTCTCTGCATAAATACACAC  300

seq1  ACACACACAGACACACGCACATACACACACACAGACACATACACTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGACACACGCACATACACACACACAGACACATACACTCCATA  350

seq1  TATTAGACCAAGAGGTTGTATATAACTTTACCAACCTTATATTTGCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGACCAAGAGGTTGTATATAACTTTACCAACCTTATATTTGCTAAT  400

seq1  GCCAAGAAGAATTC  414
      ||||||||||||||
seq2  GCCAAGAAGAATTC  414