BAC Information

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BAC

Clone NameB6Ng01-139P07
Chromosome10 (Build37)
Map Location 123,256,072 - 123,373,926
singlet/doubletdoublet
Overlap genenone
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139P07.bB6Ng01-139P07.g
ACCDH938810DH938811
length1,1251,087
definitionDH938810|Mus musculus domesticus DNA, BAC clone: B6Ng01-139P07, 5' end.DH938811|Mus musculus domesticus DNA, BAC clone: B6Ng01-139P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,372,799 - 123,373,926)(123,256,072 - 123,257,187)
sequence
gaattctttcaaaaacaacagtaaatttatatagaagcaaaaatctaaag
aaaagaaactttgagcaccttggagcagaaagttgggatgaggcaaatta
gtgtcattcataaatattctattaaaatttataaagacccttttgatgtt
gtctccagattgaaaatggctgtggatttgcttcctttgtgcaactttta
tcatccttgactttgtgtcacaagtgcttgccttgctgttaagcgaggaa
tggtggtctcagcgctttccctgtaactcctctctaaccccctcatctga
gaacagccttcctgccaagttccaaatccagagccttctgtcacttttgc
tgcattcctaatatttcatcaaaaactctggcattttgaaatggtgaaaa
tgatcggcttgggacaagtgaacaccactcaatattggagacaaaagatt
aaatcccaactctggtgtcaccttctgagttatggtaagactttatgaga
gttcaaatttctctaagcttaaatgttttcactaggaaatttataaccta
acaaaaatcaaacatactgggttcctgtgctggttaagaaaatgatgcct
ttgctgacaataagtttgtataatccttaacacataacacacaatcactg
gatttcttcagaatccaaagatctacatttatatctgctgaacttacaaa
aataaattaagtgaaatatcatttttaccttagtgaaaactagactataa
agaattcaataaatttacaattgtgtaaagtaagaattgcccaaattgta
tttagtttgaatttatcctatgtataaaaatggttatcttcaatgtaaaa
taatatataaattcaaatttattttaatggaatttcaaaagaatataatt
ttgagtgaatatatttgaaactgggctattttaaagaaatactttcacta
atgtatacttaaatatttaaaaattacttataaaatataataagactttt
tctactctttaaaactacatgcttgtattttcccaattggtgtaagatac
tgtggtagtaatattcactataatatttctttttgagtaacataaaaata
ctagattcatatcagactttttact
gaattcacttttgtataggatgataagtatggttgtctttggattcctct
acatacagacacccattttgatcagcaccatttattagagatgctgtctt
tttcccagtatccatttctggtttctttattaaaaaaaaaaaaaatcagg
tgtcaataaacgtgtaaacttgtaacttcttcttcaatttattccattga
tcaatgtgtctgtttttgtgccaatatcatgctgttttcatagctctgta
gtaaaatttgagaccagggatggttttactctcaacagttctctagccct
gaaatttcatgcttttgttgtgaggagttatagatgttcagattgtttga
gcaaagtccgtcttatacgtttcttaatttgtgcatgtgttagataatat
agttacatttacttaatgacaatttgaataattaaacctttgtctatatc
aaagcaaaaattgtttgggatcaacatcactgtaacagaagacaggaaag
attagagactttggaattggggatgctattaggcttctccacaaaaagtg
aatttccttcaacctacatggtaggaagaggctacacaattcagagaaat
gcactaggtggaagttagccttctatccttccacagagaaacaggaagct
ggtatggttcttactgaagtttccatttaaacagatagatctcaaatgct
tttgagagacacttctgggttgaaaaatggataagaaacttgaacaaagt
ctttacacaccaatagggccgaggagagtagtgggacccagcgtgctagg
ccaatattctgttcttgagttaagatatcagccatttactttttaagaca
aagtctattatatgggtccggctagccaggtctaaacattctcctctcac
actctgcaccttcccaccctattattctgttcttactaacagtcttttca
acatagtgtctaaaatatttctttttgcatatgggtgttactttacatat
gtgttgctgtctctcagagcagagatgatacgatccctgaaactgagttc
gatcttgtggagccacattggttcgagaactgacccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123372799_123373926
seq2: B6Ng01-139P07.b_47_1171 (reverse)

seq1  AGTAAAAGGTCTTGATATGAATCTAGTATTTTTTATGTTACTCAAAA--G  48
      ||||||| ||| |||||||||||||||| ||||||||||||||||||   
seq2  AGTAAAAAGTC-TGATATGAATCTAGTA-TTTTTATGTTACTCAAAAAGA  48

seq1  AATATTATAGTGAATATTAACTAACACAGTATCTTACACCAATTGGGAAA  98
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  AATATTATAGTGAATATT-ACTACCACAGTATCTTACACCAATTGGGAAA  97

seq1  ATAACAAGCATGTAGTTTTAAAAGAGTAG-AAAAGTCTTATTATATTTTA  147
      || |||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  AT-ACAAGCATGTAGTTTT-AAAGAGTAGAAAAAGTCTTATTATATTTTA  145

seq1  TAAGTAATTTTTAAATATTTAAGTATACATTAGTGAAAGTATTTCTTTAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAATTTTTAAATATTTAAGTATACATTAGTGAAAGTATTTCTTTAA  195

seq1  AATAGCCCAGTTTCAAATATATTCACTCAAAATTATATTTCTTTTGAAAT  247
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATAGCCCAGTTTCAAATATATTCACTCAAAATTATA-TTCTTTTGAAAT  244

seq1  TCCATTAAAATAAATTTGAATTTATATATTATTTTACATTGAAGATAACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAAAATAAATTTGAATTTATATATTATTTTACATTGAAGATAACC  294

seq1  ATTTTTATACATAGGATAAATTCAAACTAAATACAATTTGGGCAATTCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATACATAGGATAAATTCAAACTAAATACAATTTGGGCAATTCTT  344

seq1  ACTTTACACAATTGTAAATTTATTGAATTCTTTATAGTCTAGTTTTCACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACACAATTGTAAATTTATTGAATTCTTTATAGTCTAGTTTTCACT  394

seq1  AAGGTAAAAATGATATTTCACTTAATTTATTTTTGTAAGTTCAGCAGATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAAATGATATTTCACTTAATTTATTTTTGTAAGTTCAGCAGATA  444

seq1  TAAATGTAGATCTTTGGATTCTGAAGAAATCCAGTGATTGTGTGTTATGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAGATCTTTGGATTCTGAAGAAATCCAGTGATTGTGTGTTATGT  494

seq1  GTTAAGGATTATACAAACTTATTGTCAGCAAAGGCATCATTTTCTTAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGATTATACAAACTTATTGTCAGCAAAGGCATCATTTTCTTAACC  544

seq1  AGCACAGGAACCCAGTATGTTTGATTTTTGTTAGGTTATAAATTTCCTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGAACCCAGTATGTTTGATTTTTGTTAGGTTATAAATTTCCTAG  594

seq1  TGAAAACATTTAAGCTTAGAGAAATTTGAACTCTCATAAAGTCTTACCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATTTAAGCTTAGAGAAATTTGAACTCTCATAAAGTCTTACCAT  644

seq1  AACTCAGAAGGTGACACCAGAGTTGGGATTTAATCTTTTGTCTCCAATAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAGGTGACACCAGAGTTGGGATTTAATCTTTTGTCTCCAATAT  694

seq1  TGAGTGGTGTTCACTTGTCCCAAGCCGATCATTTTCACCATTTCAAAATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGTGTTCACTTGTCCCAAGCCGATCATTTTCACCATTTCAAAATG  744

seq1  CCAGAGTTTTTGATGAAATATTAGGAATGCAGCAAAAGTGACAGAAGGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTTTGATGAAATATTAGGAATGCAGCAAAAGTGACAGAAGGCT  794

seq1  CTGGATTTGGAACTTGGCAGGAAGGCTGTTCTCAGATGAGGGGGTTAGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTGGAACTTGGCAGGAAGGCTGTTCTCAGATGAGGGGGTTAGAG  844

seq1  AGGAGTTACAGGGAAAGCGCTGAGACCACCATTCCTCGCTTAACAGCAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTACAGGGAAAGCGCTGAGACCACCATTCCTCGCTTAACAGCAAG  894

seq1  GCAAGCACTTGTGACACAAAGTCAAGGATGATAAAAGTTGCACAAAGGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACTTGTGACACAAAGTCAAGGATGATAAAAGTTGCACAAAGGAA  944

seq1  GCAAATCCACAGCCATTTTCAATCTGGAGACAACATCAAAAGGGTCTTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCCACAGCCATTTTCAATCTGGAGACAACATCAAAAGGGTCTTTA  994

seq1  TAAATTTTAATAGAATATTTATGAATGACACTAATTTGCCTCATCCCAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTAATAGAATATTTATGAATGACACTAATTTGCCTCATCCCAAC  1044

seq1  TTTCTGCTCCAAGGTGCTCAAAGTTTCTTTTCTTTAGATTTTTGCTTCTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCCAAGGTGCTCAAAGTTTCTTTTCTTTAGATTTTTGCTTCTA  1094

seq1  TATAAATTTACTGTTGTTTTTGAAAGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  TATAAATTTACTGTTGTTTTTGAAAGAATTC  1125

seq1: chr10_123256072_123257187
seq2: B6Ng01-139P07.g_69_1154

seq1  GAATTCACTTTTGTATAGGATGATAAGTATGGTTGTCTTTGGATTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTGTATAGGATGATAAGTATGGTTGTCTTTGGATTCCTCT  50

seq1  ACATACAGACACCCATTTTGATCAGCACCATTTATTAGAGATGCTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGACACCCATTTTGATCAGCACCATTTATTAGAGATGCTGTCTT  100

seq1  TTTCCCAGTATCCATTTCTGGTTTCTTTATTAAAAAAAAAAAAAATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGTATCCATTTCTGGTTTCTTTATTAAAAAAAAAAAAAATCAGG  150

seq1  TGTCAATAAACGTGTAAACTTGTAACTTCTTCTTCAATTTATTCCATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAAACGTGTAAACTTGTAACTTCTTCTTCAATTTATTCCATTGA  200

seq1  TCAATGTGTCTGTTTTTGTGCCAATATCATGCTGTTTTCATAGCTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTGTCTGTTTTTGTGCCAATATCATGCTGTTTTCATAGCTCTGTA  250

seq1  GTAAAATTTGAGACCAGGGATGGTTTTACTCTCAACAGTTCTCTAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTTGAGACCAGGGATGGTTTTACTCTCAACAGTTCTCTAGCCCT  300

seq1  GAAATTTCATGCTTTTGTTGTGAGGAGTTATAGATGTTCAGATTGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCATGCTTTTGTTGTGAGGAGTTATAGATGTTCAGATTGTTTGA  350

seq1  GCAAAGTCCGTCTTATACGTTTCTTAATTTGTGCATGTGTTAGATAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTCCGTCTTATACGTTTCTTAATTTGTGCATGTGTTAGATAATAT  400

seq1  AGTTACATTTACTTAATGACAATTTGAATAATTAAACCTTTGTCTATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACATTTACTTAATGACAATTTGAATAATTAAACCTTTGTCTATATC  450

seq1  AAAGCAAAAATTGTTTGGGATCAACATCACTGTAACAGAAGACAGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAATTGTTTGGGATCAACATCACTGTAACAGAAGACAGGAAAG  500

seq1  ATTAGAGACTTTGGAATTGGGGATGCTATTAGGCTTCTCCACAAAAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGACTTTGGAATTGGGGATGCTATTAGGCTTCTCCACAAAAAGTG  550

seq1  AATTTCCTTCAACCTACATGGTAGGAAGAGGCTACACAATTCAGAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTTCAACCTACATGGTAGGAAGAGGCTACACAATTCAGAGAAAT  600

seq1  GCACTAGGTGGAAGTTAGCCTTCTATCCTTCCACAGAGAAACAGGAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGTGGAAGTTAGCCTTCTATCCTTCCACAGAGAAACAGGAAGCT  650

seq1  GGTATGGTTCTTACTGAAGTTTCCATTTAAACAGATAGATCTCAAATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGTTCTTACTGAAGTTTCCATTTAAACAGATAGATCTCAAATGCT  700

seq1  TTTGAGAGACACTTCTGGGTTGAAAAATGGATAAGAAACTTGAACAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGACACTTCTGGGTTGAAAAATGGATAAGAAACTTGAACAAAGT  750

seq1  CTTTACACACCAATAGGGCCGAGGAGAGTAGTGGGACCCAGCGTGCTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACACCAATAGGGCCGAGGAGAGTAGTGGGACCCAGCGTGCTAGG  800

seq1  CCAATATTCTGTTCTTGAGTTAAGATATCAGCCATTTACTTTTTAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTCTGTTCTTGAGTTAAGATATCAGCCATTTACTTTTTAAGACA  850

seq1  AAGTCTATTATATGGGTCCGGCTAGCCAGGTCTAAACATTCTCCCTCTCA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGTCTATTATATGGGTCCGGCTAGCCAGGTCTAAACATTCT-CCTCTCA  899

seq1  CAACTCTTGCCACCTTCCCACCCCTATTATTCTGTTCTTACTAACAAGTC  950
      | |||||   |||||||||| |||||||||||||||||||||||| ||||
seq2  C-ACTCT--GCACCTTCCCA-CCCTATTATTCTGTTCTTACTAAC-AGTC  944

seq1  CTTTTCCAACATTAGTGTCCTAAAATATTTCTTTTATGCATATGGGTGTT  1000
        ||| ||||| |||||| |||||||||||||||| ||||||||||||||
seq2  --TTTTCAACA-TAGTGT-CTAAAATATTTCTTTT-TGCATATGGGTGTT  989

seq1  TACCTTTACCATATGTGTGCCTGGTTCTCTCAGAGACCAGAAGATGATAA  1050
         ||||| |||||||||  |||  ||||||||||  ||| |||||||| 
seq2  --ACTTTA-CATATGTGTTGCTG--TCTCTCAGAG--CAG-AGATGATA-  1030

seq1  CAGATCCCCTGAAACTGGAGTTTCAGATCTTTGTGAGCCACCAAATGGGT  1100
        ||| |||||||||| |||||   ||||||   |||||||   || |||
seq2  -CGAT-CCCTGAAACT-GAGTT--CGATCTTGTGGAGCCAC---ATTGGT  1072

seq1  TCGAGAAACCTGACCC  1116
      |||||||  |||||||
seq2  TCGAGAA--CTGACCC  1086