BAC Information

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BAC

Clone NameB6Ng01-140A15
Chromosome10 (Build37)
Map Location 67,391,196 - 67,541,826
singlet/doubletdoublet
Overlap genePlekhk1
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
Downstream geneArid5b, LOC100040136, 1700040L02Rik, EG665342, Tmem26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140A15.bB6Ng01-140A15.g
ACCDH938871DH938872
length1,2071,138
definitionDH938871|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A15, 5' end.DH938872|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,540,604 - 67,541,826)(67,391,196 - 67,391,869)
sequence
gaattcagaggttcagtccattatcatcatggcagcacacaggcagacat
gatactggagtggtagctgagaattctacatctggatcggcaggcaccag
gaagagagtaagacactgagcctggcttgagaatctgaaacctcaaaggc
cacccccagtgacacacttcctccaatatggccacacctcctccaacaag
gccacacctcccagaggtgccactccctctaagcctatgggggacatttt
cattcaaacgaccgcaatgagcatactgctacacctgactcactcaactt
tttaagaaactaagtggaagatgagaaggattttctcactctccagagca
tatggactaagaatctctccctcttgctgagaactctcctgtctcttgga
tgggtctctttggacacaccacctggtgattaaactatctttttgttttg
tgtcccttctatccagaagaccaaaagtatgctagcttattgattcactg
aacatttttcttgcatcgttcagaaatggcccaaataagacctacacatc
tgtctccttacaactattatagaagggaacaaataacagattcagaatcc
ttcttgacacattgaaatttaatgggtcagttcaatttgcaattgaagta
caagtgagtaggttctgcgcgagtcaccacgggcttagccatcagcagag
atgggggatttttttagagtttgcaagaagccagcactggcacaacactg
aaaccctaggcagctttggtataaagagctgtgaaatattaaagggggag
ggattgtgactgacagcttattgtgtccagtaagtaaagattgccaatgt
gggcaacacaatcattttctcctacggatattacccctgtgacgaaaggc
ataaccccttgtaactcacaggacccagagagatagaagcttacgaagtg
tacaggcctctctggaggttactcatgcagtgagaatagttcagagatga
tgtaccttctgtaagctatcacccaagctgaagtagggttttgatgatgc
agctgccttatttgagtcaccatcttggcctaactagggtttactgctgg
aagagaatcatgaccaaacaatctctaaaagagaaaaacatttattgggg
gctgcctaacagtttcagaagattagtttcatgttctactgaccgaaaca
tgcagca
gaattcaaatccagtgggtgctagttttgaaatcaaaagcagtcctcggt
ccaaggttctacagatggcgaacaatgttgaggttaagaaataactttca
ggcacatatcaatcaagagccctcacaccccccaacgtgagctaaagagg
aagcagatggtagaacctgtcaatttctttgtgaagagtttagaaaaacc
taaagcaatgccccgggggattgttctgggagaggaaaagttctgcaagg
attggaaagctgtattcccagcctcagaagcctatggctgagacgagctt
ccaaagaaggcattggtgagtacagctcttcgttcatacatgccagtgag
atgcagaccaaaaataaaacgtttttcaaaattaaaaggaattacactaa
ctgaaatcatccttgggcagaaagagatggagacatcaacaaaatgacag
gaagcctttgagttcagacagtggataaagacagaacgggactaaggatc
cagagaatgaaccaaaggcagaacaatgccaatacaactctgattagacc
agaaagggtgaaacaagaaatgcagaaaatggcgcaaagatgtctcagaa
ccttcaatccagagaggggaccaaagaaggcgtggaaccaggagtccaga
gagtgggccaaagctatctagaataattactagggagcgctagaactgga
tctgaaaacgtgttgtgctgtagcttcaaaatccccacatacccatggtt
tctgccttctcatcttcctcttttctattgggaggactcatagcagttac
tctgtgcctgcctcactattgcaggctggcatttaggaagcctagaatca
accttattgttctcaccggtactctgatcaacaggaatgatcttaaaagc
tgtatgagaggaagtgcaatcttcacatcttaggagtcctcatctgctcc
ttctttcttgcgatgttcaaatggcctgagatgggtctcggtttaaaatt
aaattgttcgatactgaagtatcaagaaggactctgtcaaagaagacaat
gaacaagttagggctacttttggatgggacaaatgtgagaagtcatttgt
ctttgggtttttctttttcttgtaaaaacacccatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67540604_67541826
seq2: B6Ng01-140A15.b_52_1258 (reverse)

seq1  TGCTGCCATGTTTCCCGTCATGATGAACATGAACTAAATCCTTCTGAAAC  50
      ||||| ||||||| | |||| |  |||||||||   ||| ||||||||||
seq2  TGCTG-CATGTTT-CGGTCA-GTAGAACATGAAACTAAT-CTTCTGAAAC  46

seq1  TGTAAGCTAGCCCCCAATTAAATGTTTTTCTTTATAAGAG-TTGTGTTGG  99
      ||| ||  ||||||||| ||||||||||||| | | |||| |||| ||||
seq2  TGTTAGGCAGCCCCCAA-TAAATGTTTTTCTCTTTTAGAGATTGT-TTGG  94

seq1  TCATGGTGTCTCTTCACAGCAGTAAAACCCTAGCTAAGACAAGATGGGTG  149
      ||||| | ||||||| ||||||| ||||||||| || | |||||| ||||
seq2  TCATGAT-TCTCTTC-CAGCAGT-AAACCCTAGTTAGGCCAAGAT-GGTG  140

seq1  ACTCAAAATAAGGCAGCTGCATCATCAAAACCCCTACTCCAGCCTGGGTG  199
      |||| ||||||||||||||||||||||||| ||||||| |||| ||||||
seq2  ACTC-AAATAAGGCAGCTGCATCATCAAAA-CCCTACTTCAGCTTGGGTG  188

seq1  ATAGCTTACAGAAGGTACATCATCTCTGAACCTATTCTCACTGCATGAGT  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAGCTTACAGAAGGTACATCATCTCTGAA-CTATTCTCACTGCATGAGT  237

seq1  AACCTCCAGGAGAGGCCTGTACACTTCGTAAGCTTCTATACTCTCTGGGT  299
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  AACCTCCA-GAGAGGCCTGTACACTTCGTAAGCTTCTAT-CTCTCTGGGT  285

seq1  CCTGTGAGTTACAAGGGGTTATGCCTTTCGTCACAGGGGTAATATTCCGT  349
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  CCTGTGAGTTACAAGGGGTTATGCCTTTCGTCACAGGGGTAATA-TCCG-  333

seq1  TAGGAGAAAATGATTGTGTTGCCCACATTGGCAATCTTTACTTACTGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAAATGATTGTGTTGCCCACATTGGCAATCTTTACTTACTGGAC  383

seq1  ACAATAAGCTGTCAGTCACAATCCCTCCCCCTTTAATATTTCACAGCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGCTGTCAGTCACAATCCCTCCCCCTTTAATATTTCACAGCTCT  433

seq1  TTATACCAAAGCTGCCTAGGGTTTCAGTGTTGTGCCAGTGCTGGCTTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCAAAGCTGCCTAGGGTTTCAGTGTTGTGCCAGTGCTGGCTTCTT  483

seq1  GCAAACTCTAAAAAAATCCCCCATCTCTGCTGATGGCTAAGCCCGTGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCTAAAAAAATCCCCCATCTCTGCTGATGGCTAAGCCCGTGGTG  533

seq1  ACTCGCGCAGAACCTACTCACTTGTACTTCAATTGCAAATTGAACTGACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGCGCAGAACCTACTCACTTGTACTTCAATTGCAAATTGAACTGACC  583

seq1  CATTAAATTTCAATGTGTCAAGAAGGATTCTGAATCTGTTATTTGTTCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATTTCAATGTGTCAAGAAGGATTCTGAATCTGTTATTTGTTCCC  633

seq1  TTCTATAATAGTTGTAAGGAGACAGATGTGTAGGTCTTATTTGGGCCATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAATAGTTGTAAGGAGACAGATGTGTAGGTCTTATTTGGGCCATT  683

seq1  TCTGAACGATGCAAGAAAAATGTTCAGTGAATCAATAAGCTAGCATACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACGATGCAAGAAAAATGTTCAGTGAATCAATAAGCTAGCATACTT  733

seq1  TTGGTCTTCTGGATAGAAGGGACACAAAACAAAAAGATAGTTTAATCACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTCTGGATAGAAGGGACACAAAACAAAAAGATAGTTTAATCACC  783

seq1  AGGTGGTGTGTCCAAAGAGACCCATCCAAGAGACAGGAGAGTTCTCAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGTGTCCAAAGAGACCCATCCAAGAGACAGGAGAGTTCTCAGCA  833

seq1  AGAGGGAGAGATTCTTAGTCCATATGCTCTGGAGAGTGAGAAAATCCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAGATTCTTAGTCCATATGCTCTGGAGAGTGAGAAAATCCTTC  883

seq1  TCATCTTCCACTTAGTTTCTTAAAAAGTTGAGTGAGTCAGGTGTAGCAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCACTTAGTTTCTTAAAAAGTTGAGTGAGTCAGGTGTAGCAGT  933

seq1  ATGCTCATTGCGGTCGTTTGAATGAAAATGTCCCCCATAGGCTTAGAGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATTGCGGTCGTTTGAATGAAAATGTCCCCCATAGGCTTAGAGGG  983

seq1  AGTGGCACCTCTGGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCATATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACCTCTGGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCATATT  1033

seq1  GGAGGAAGTGTGTCACTGGGGGTGGCCTTTGAGGTTTCAGATTCTCAAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGTGTGTCACTGGGGGTGGCCTTTGAGGTTTCAGATTCTCAAGC  1083

seq1  CAGGCTCAGTGTCTTACTCTCTTCCTGGTGCCTGCCGATCCAGATGTAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCAGTGTCTTACTCTCTTCCTGGTGCCTGCCGATCCAGATGTAGA  1133

seq1  ATTCTCAGCTACCACTCCAGTATCATGTCTGCCTGTGTGCTGCCATGATG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGCTACCACTCCAGTATCATGTCTGCCTGTGTGCTGCCATGATG  1183

seq1  ATAATGGACTGAACCTCTGAATTC  1223
      ||||||||||||||||||||||||
seq2  ATAATGGACTGAACCTCTGAATTC  1207

seq1: chr10_67391196_67391869
seq2: B6Ng01-140A15.g_527_1204

seq1  AGTTCAGACAGTGGATAAAGACAGAACGGGACTAAGGATCCAGAGAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGACAGTGGATAAAGACAGAACGGGACTAAGGATCCAGAGAATGA  50

seq1  ACCAAAGGCAGAACAATGCCAATACAACTCTGATTAGACCAGAAAGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGCAGAACAATGCCAATACAACTCTGATTAGACCAGAAAGGGTG  100

seq1  AAACAAGAAATGCAGAAAATGGCGCAAAGATGTCTCAGAACCTTCAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAAATGCAGAAAATGGCGCAAAGATGTCTCAGAACCTTCAATCC  150

seq1  AGAGAGGGGACCAAAGAAGGCGTGGAACCAGGAGTCCAGAGAGTGGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGGACCAAAGAAGGCGTGGAACCAGGAGTCCAGAGAGTGGGCCA  200

seq1  AAGCTATCTAGAATAATTACTAGGGAGCGCTAGAACTGGATCTGAAAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATCTAGAATAATTACTAGGGAGCGCTAGAACTGGATCTGAAAACG  250

seq1  TGTTGTGCTGTAGCTTCAAAATCCCCACATACCCATGGTTTCTGCCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGCTGTAGCTTCAAAATCCCCACATACCCATGGTTTCTGCCTTCT  300

seq1  CATCTTCCTCTTTTCTATTGGGAGGACTCATAGCAGTTACTCTGTGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCTCTTTTCTATTGGGAGGACTCATAGCAGTTACTCTGTGCCTG  350

seq1  CCTCACTATTGCAGGCTGGCATTTAGGAAGCCTAGAACCAACCTTATTG-  399
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  CCTCACTATTGCAGGCTGGCATTTAGGAAGCCTAGAATCAACCTTATTGT  400

seq1  TCCCACCGGTACTCTGATCAACAGGAATGACCTTAAAAGCTGTATGAGAG  449
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTCACCGGTACTCTGATCAACAGGAATGATCTTAAAAGCTGTATGAGAG  450

seq1  GAAGTGCAA-CCTCACATC-TAGGAG-CCCCACCTGCTCCTGC-TTCCTG  495
      ||||||||| | ||||||| |||||| || || |||||||| | ||| ||
seq2  GAAGTGCAATCTTCACATCTTAGGAGTCCTCATCTGCTCCTTCTTTCTTG  500

seq1  CGATGTTCAAATGGCCCGAGATGGG-CCCGGTTTAAAATTAAA-TGTTCG  543
      |||||||||||||||| |||||||| | ||||||||||||||| ||||||
seq2  CGATGTTCAAATGGCCTGAGATGGGTCTCGGTTTAAAATTAAATTGTTCG  550

seq1  ATTACTGAAGTATCACAGAAGGACTCTGTCATAGAAGACAATGAACAGGT  593
      | ||||||||||||| ||||||||||||||| ||||||||||||||| ||
seq2  A-TACTGAAGTATCA-AGAAGGACTCTGTCAAAGAAGACAATGAACAAGT  598

seq1  AGGGGCTAC-TCTGGATGGGACAAAAATGTGAGAAGTCATTTGTCTTGGG  642
        ||||||| | ||||||||||  ||||||||||||||||||||||| ||
seq2  TAGGGCTACTTTTGGATGGGAC--AAATGTGAGAAGTCATTTGTCTTTGG  646

seq1  GTTTTCTTTGCTGTTAAAAAAAACACCATGAC  674
      |||||  ||  | ||  |||||   |||||||
seq2  GTTTTTCTTTTTCTTGTAAAAACACCCATGAC  678