BAC Information

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BAC

Clone NameB6Ng01-140L17
Chromosome10 (Build37)
Map Location 127,613,820 - 127,645,269
singlet/doubletdoublet
Overlap geneRbms2, LOC100043624, Gls2
Upstream geneC78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085
Downstream geneSpryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140L17.bB6Ng01-140L17.g
ACCDH939377DH939378
length8611,109
definitionDH939377|Mus musculus domesticus DNA, BAC clone: B6Ng01-140L17, 5' end.DH939378|Mus musculus domesticus DNA, BAC clone: B6Ng01-140L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,644,411 - 127,645,269)(127,613,820 - 127,614,938)
sequence
gaattctttttgtttgtttgttttttgtttttcgagacaggttttctttt
tatagccctgtcctggaactcactctgtagaccaggctggccttgaactc
agaaattcgcctgcctcccgagtgctgggattaaagacatgcgccactag
cccagctgagttgatgaattcttaactcacagcaggcgctttgattttaa
aacaacaaatcctcaggctggagagatagctcagtgaagtgcttgcctgc
caagacctgagtttgatccacagactccacattgaaaaaaaaataaaaat
agtagcactggtttttaatcctagattggtggggggtggggacaggtaag
tccctggggcttgataggttatgacatctgaaattgtcctctggctacca
caggcacacatacaaatgtgcaactgggcaagcaggcatgtgtacacaat
gagcctacagacacttatttaaatgcagcttctctagtctaacgggtaaa
ccgaagcatttagcagtttgctgcacagtgtcctaataagatgtgggact
gcgagtattttattacctctatttagtcatgacagaattaccttcgaagg
gccgagacatctccactatatgcagcaaatagcaggttcaccacggtctt
gttctggaaacacacattgcacccacctgagaagaactgtggctgtgaac
ctcagtcatgctcagctctccccgaggccctcctccgtggggcctctttc
ccaaggccactgctgaagtcttgtggaatgaatgatacctctaaaatacc
cttaggttaccgggtcttctttacccgaatctctttctctttctctccgt
gggtctaactt
gaattcttaggtctaatccttttcaaatgtaaccctgtttctccatgaac
aagttctgattattatgaaaagacaattaacctattattaataaaagaca
atggtttttgttgttgttttgttttgatttgaagctttctttccctgaga
tctcagctacaagatttcaaacttggcctgaaaaatgtcttagtaagttg
ccaggcctatgctcagttcccagatctacatggtagaaggagagaaccag
ctaccaaaaatttttctcccccgaccccagcacccaatgtggcatgccca
catatgcacatacaaaaagaaataaatgaaatagtatatatatatatata
tatatatatttaaagacatcaagcttagtgtaaaaggaccatcttgactg
cctcccagagcatggaaagaagactatatggcaataccgtgtgtgagagc
tcagagctcagactagtttatattagggtgattttttttttttttttttt
tggtttttgagacagggtttctctgtgtagccctggcagtcctggaactc
actttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcc
tcccgagtactgggattaaaggtgtgcaccaccacgcccaggcccagctt
atattagggtgatcttgatgcagtaagaaagattttggagtctggagagc
tggctcaggggttaagagcatggctgctactccaggagagcacagctgat
cctcagcatccacatgaggtgactcacaagtcacctctatggcccactag
cttccatggatacccagcatgctcacacatgtgtgctctctctcccttct
cccactcccccccccatcatatacacatgcatacgttatcactacataag
tacacaaaacacacacagagacacacatactcccccaatgttttattttt
tattttttgaagacagttttctctgtgtgccctgaatgtcaggaactcaa
ctctgtaaccaggctggcccggaatatgcctaaccttgacctccaaatgc
tggaatcaaagtgtaccccccactgcaagcctatttttaccataaaaaaa
aatatcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127644411_127645269
seq2: B6Ng01-140L17.b_47_907 (reverse)

seq1  AAGTTAGACCCACGGAGGGAAGGAG-GAGAGGTTCGGGTAAGGAAGACCC  49
      ||||||||||||||||| ||| |||  |||| ||||||||| ||||||||
seq2  AAGTTAGACCCACGGAGAGAAAGAGAAAGAGATTCGGGTAAAGAAGACCC  50

seq1  GGTAGCCTAAAGGGTATTTTAGAAGGTATCATACATTCCACAAGACTTCA  99
      |||| ||| ||||||||||||| ||||||||| |||||||||||||||||
seq2  GGTAACCT-AAGGGTATTTTAG-AGGTATCATTCATTCCACAAGACTTCA  98

seq1  GCAGTGGCCTTGGTGAAGAGG-CCCACGGAGGAGGGCCTCGGGGAGAGCT  148
      |||||||||||||  |||||| ||||||||||||||||||||||||||||
seq2  GCAGTGGCCTTGGGAAAGAGGCCCCACGGAGGAGGGCCTCGGGGAGAGCT  148

seq1  GAGCATGGCTG-GGTTCACAGCCACAGTTCTTCTCAGGTGGGTGCAATGT  197
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGACTGAGGTTCACAGCCACAGTTCTTCTCAGGTGGGTGCAATGT  198

seq1  GTG-TTCCAGAACAAGACCGTGGTGAACCTGCTATTTGCTGCATATAGTG  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCAGAACAAGACCGTGGTGAACCTGCTATTTGCTGCATATAGTG  248

seq1  GAGATGTCTCGGCCCTTCGAAGGTAATTCTGTCATGACTAAATAGAGGTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTCGGCCCTTCGAAGGTAATTCTGTCATGACTAAATAGAGGTA  298

seq1  ATAAAATACTCGCAGTCCCACATCTTATTAGGACACTGTGCAGCAAACTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACTCGCAGTCCCACATCTTATTAGGACACTGTGCAGCAAACTG  348

seq1  CTAAATGCTTCGGTTTACCCGTTAGACTAGAGAAGCTGCATTTAAATAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCTTCGGTTTACCCGTTAGACTAGAGAAGCTGCATTTAAATAAG  398

seq1  TGTCTGTAGGCTCATTGTGTACACATGCCTGCTTGCCCAGTTGCACATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAGGCTCATTGTGTACACATGCCTGCTTGCCCAGTTGCACATTT  448

seq1  GTATGTGTGCCTGTGGTAGCCAGAGGACAATTTCAGATGTCATAACCTAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGCCTGTGGTAGCCAGAGGACAATTTCAGATGTCATAACCTAT  498

seq1  CAAGCCCCAGGGACTTACCTGTCCCCACCCCCCACCAATCTAGGATTAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCCAGGGACTTACCTGTCCCCACCCCCCACCAATCTAGGATTAAA  548

seq1  AACCAGTGCTACTATTTTTATTTTTTTTTCAATGTGGAGTCTGTGGATCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGCTACTATTTTTATTTTTTTTTCAATGTGGAGTCTGTGGATCA  598

seq1  AACTCAGGTCTTGGCAGGCAAGCACTTCACTGAGCTATCTCTCCAGCCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGTCTTGGCAGGCAAGCACTTCACTGAGCTATCTCTCCAGCCTG  648

seq1  AGGATTTGTTGTTTTAAAATCAAAGCGCCTGCTGTGAGTTAAGAATTCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGTTGTTTTAAAATCAAAGCGCCTGCTGTGAGTTAAGAATTCAT  698

seq1  CAACTCAGCTGGGCTAGTGGCGCATGTCTTTAATCCCAGCACTCGGGAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGCTGGGCTAGTGGCGCATGTCTTTAATCCCAGCACTCGGGAGG  748

seq1  CAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGAATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCA  798

seq1  GGACAGGGCTATAAAAAGAAAACCTGTCTCGAAAAACAAAAAACAAACAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGGCTATAAAAAGAAAACCTGTCTCGAAAAACAAAAAACAAACAA  848

seq1  ACAAAAAGAATTC  859
      |||||||||||||
seq2  ACAAAAAGAATTC  861

seq1: chr10_127613820_127614938
seq2: B6Ng01-140L17.g_67_1175

seq1  GAATTCTTAGGTCTAATCCTTTTCAAATGTAACCCTGTTTCTCCATGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGTCTAATCCTTTTCAAATGTAACCCTGTTTCTCCATGAAC  50

seq1  AAGTTCTGATTATTATGAAAAGACAATTAACCTATTATTAATAAAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGATTATTATGAAAAGACAATTAACCTATTATTAATAAAAGACA  100

seq1  ATGGTTTTTGTTGTTGTTTTGTTTTGATTTGAAGCTTTCTTTCCCTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTTGTTGTTGTTTTGTTTTGATTTGAAGCTTTCTTTCCCTGAGA  150

seq1  TCTCAGCTACAAGATTTCAAACTTGGCCTGAAAAATGTCTTAGTAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTACAAGATTTCAAACTTGGCCTGAAAAATGTCTTAGTAAGTTG  200

seq1  CCAGGCCTATGCTCAGTTCCCAGATCTACATGGTAGAAGGAGAGAACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTATGCTCAGTTCCCAGATCTACATGGTAGAAGGAGAGAACCAG  250

seq1  CTACCAAAAATTTTTCTCCCCCGACCCCAGCACCCAATGTGGCATGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAAAATTTTTCTCCCCCGACCCCAGCACCCAATGTGGCATGCCCA  300

seq1  CATATGCACATACAAAAAGAAATAAATGAAATAGTATATATATATATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCACATACAAAAAGAAATAAATGAAATAGTATATATATATATATA  350

seq1  TATATATATTTAAAGACATCAAGCTTAGTGTAAAAGGACCATCTTGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTTAAAGACATCAAGCTTAGTGTAAAAGGACCATCTTGACTG  400

seq1  CCTCCCAGAGCATGGAAAGAAGACTATATGGCAATACCGTGTGTGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGAGCATGGAAAGAAGACTATATGGCAATACCGTGTGTGAGAGC  450

seq1  TCAGAGCTCAGACTAGTTTATATTAGGGTGATTTTTTTTTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTCAGACTAGTTTATATTAGGGTGATTTTTTTTTTTTTTTTTTT  500

seq1  TGGTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCAGTCCTGGAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCAGTCCTGGAACTC  550

seq1  ACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCC  600

seq1  TCCCGAGTACTGGGATTAAAGGTGTGCACCACCACGCCCAGGCCCAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTACTGGGATTAAAGGTGTGCACCACCACGCCCAGGCCCAGCTT  650

seq1  ATATTAGGGTGATCTTGATGCAGTAAGAAAGATTTTGGAGTCTGGAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGGGTGATCTTGATGCAGTAAGAAAGATTTTGGAGTCTGGAGAGC  700

seq1  TGGCTCAGGGGTTAAGAGCATGGCTGCTACTCCAGGAGAGCACAGCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGGGGTTAAGAGCATGGCTGCTACTCCAGGAGAGCACAGCTGAT  750

seq1  TCCCAGCATCCACATGAGGTGACTCAC-AGTCACCTCTATGG-CCACTAG  798
       | |||||||||||||||||||||||| |||||||||||||| |||||||
seq2  CCTCAGCATCCACATGAGGTGACTCACAAGTCACCTCTATGGCCCACTAG  800

seq1  CTTCCATGGATA-CCAGCATGCTCACACATGTGTGCTCTCTCTCCC-TCT  846
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  CTTCCATGGATACCCAGCATGCTCACACATGTGTGCTCTCTCTCCCTTCT  850

seq1  CCCACTCCCCCCCCCCATCATATACACATGCATACGTATATACACATACA  896
      |||||| |||||||||||||||||||||||||||||| ||| ||| ||||
seq2  CCCACT-CCCCCCCCCATCATATACACATGCATACGT-TAT-CAC-TACA  896

seq1  TAAGTACACAAAACACACACAGAGACACACATACACACACAATGTTTTAT  946
      |||||||||||||||||||||||||||||||||| | | |||||||||||
seq2  TAAGTACACAAAACACACACAGAGACACACATACTCCCCCAATGTTTTAT  946

seq1  TTTTTATTTTTTG-AGACAGGGTTTCTCTGTGTAGCCCTGAATGTTCTGG  995
      ||||||||||||| ||||| | ||||||||||| |||||||||| || ||
seq2  TTTTTATTTTTTGAAGACA-GTTTTCTCTGTGT-GCCCTGAATG-TCAGG  993

seq1  AACTC-ACTCTGTAGACCAGGCTGGCCTGGATATCTGCCTACCCCTGCCT  1044
      ||||| |||||||| |||||||||||| ||| || |||||| || || | 
seq2  AACTCAACTCTGTA-ACCAGGCTGGCCCGGA-ATATGCCTAACCTTGACC  1041

seq1  CCCAAATGCTGGGATCAAAGGTGTGCACCCCCACTGCCAAGCTAATTTTT  1094
       ||||||||||| |||||| |||| | |||||||||| |  |||   |||
seq2  TCCAAATGCTGGAATCAAA-GTGTAC-CCCCCACTGCAAGCCTA---TTT  1086

seq1  TTAACATTAAAAAAAAAGTATCTTG  1119
      ||| |||  |||||||| |||||||
seq2  TTACCAT--AAAAAAAAATATCTTG  1109