BAC Information

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BAC

Clone NameB6Ng01-140N05
Chromosome10 (Build37)2 (Build37)
Map Location 104,054,841 - 104,055,356131,762,310 - 131,763,387
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140N05.bB6Ng01-140N05.g
ACCDH939449DH939450
length8941,061
definitionDH939449|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N05, 5' end.DH939450|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,841 - 104,055,356)(131,762,310 - 131,763,387)
sequence
ggaattcaaggcccatatctaaacatgatcaaagcaatctacagcaaacc
agtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaa
aatcagggactagacaaggctgcccactttctccctacctcttcaacata
gtacttgaagtattagccagagcaatttgacaacaaaaggaaatcaaggg
gatacaaattagaaaagaggaagtcaaaatatcactttttgcagatgata
tgatagtatatataagtgaccctaaaaattccaccagagaactcctaaac
ctgataaacagcttcggtgaagtagctggatataaaattaactcaaacaa
gtcaatggcctttctctacacaaagaataaacaggctgagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaatatcttggc
gtgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtc
tctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccat
gctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaaa
gcaatctacagattcaatgcaatccccgtcaaaattccaacacaattctt
caatgaattagaaagagctatctgtaattcatctggaataacaaaaaacc
taggatagcaaaaacttcttctcaaggacaaaagcacctctggtggaatc
accatgcctgacctaaagctttactacagagcaattgtgataaaaactgc
atggtactggtatagtgacagacagtagatctaatggaatagaattgaga
cccagaatgaacccacacactatggtacttgatctttgacaagg
gaattccacgtgtggatgctctagctatcccaggtgggaggctgttttcc
agggcgccatccccaaacagtggcttctttggttgtagaaccctttgcct
atgctaagttacatgtgtcactgtcaccttgtactctgggtacaagtcag
gggatacaccagtatttattcactagaccaaaacaaagccccaactagcc
agcagttatttggtgttatattcttattggcccggtgttagcactggctg
atgacagactccatcaaagggacctgaagcaaagagcaactggtctactg
tacatttcccagggcccatcagtgccaggggtattagcctatgggggaca
cagagaagcaagaatgagaaccacctcaattgaaagagctacaggtggat
aacccctcccccagcctagaccacgagaatgcgaaggaacaagcaggaag
gcctccctcatcccacgatcaggaagatgaggaaggagatgaggaggatg
acaggaggggaggagaaaagcacggtgctgctggatcttctcccgtcgta
ataggcctgggactccttctggtactgggtgacgcacatctgctccacca
cgcgctccatcatcttcacatcggtctcggtgaagttctcccccttggtg
gtggtggtgaccgtgtgctgctttgatggtgatattgacgcagtcgtgca
cgaagttgttctggttgctgtactgatccactggcctgtagtacacttgg
ttagggtagcggtacatgttttcacggtagtagcggtcctcccagtcgtt
gccaaaatggattatggggcctgctcatggcgctcctcagcatgtagcac
caaggccccccactactgcccagctgccgcagcccctgccacatgcttga
ggttggttttgtttgctgggcttgttccactgattatgggtacccctcct
tggctcatccacgcaggtggctgacccaactaccacatgaagttgtccaa
gctgccccatgggttgacccagccccacgggggctgtcctcggtgccacc
ctgagtgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054841_104055356
seq2: B6Ng01-140N05.b_426_937 (reverse)

seq1  CCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGATCT  50
      |||||||||||||||||| |||||| |||||||||||||| ||||| || 
seq2  CCTTGTCAAAGATCAAGT-ACCATA-GTGTGTGGGTTCAT-TCTGGGTC-  46

seq1  TCAATTCTGTTCCATT-GGTCTACTTGTCTGTCGCTATACAAGTACCATG  99
      |||||||| ||||||| | ||||| |||||||| |||||| |||||||||
seq2  TCAATTCTATTCCATTAGATCTAC-TGTCTGTCACTATACCAGTACCATG  95

seq1  CAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGGATGGTG  149
      |||||||||||||||||||||||||||| || |||||||| || ||||||
seq2  CAGTTTTTATCACAATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTG  145

seq1  ATTCCACCAGAGGTTCTTTTATCCTTGAGAAG-AGTTTTTGCTATCCTAG  198
      |||||||||||||| ||||| ||||||||||| |||||||||||||||||
seq2  ATTCCACCAGAGGTGCTTTTGTCCTTGAGAAGAAGTTTTTGCTATCCTAG  195

seq1  GTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTTATAATTCTTTG  248
      ||||||||||||||||||||||| | | ||| || |||| |||||| |||
seq2  GTTTTTTGTTATTCCAGATGAAT-TACAGATAGCTCTTTCTAATTCATTG  244

seq1  AAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTGC  298
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  AAGAATTGTGTTGGAATTTTGACGGGGATTGCATTGAATCTGTAGATTGC  294

seq1  TTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGCCGATCCATGAGC  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGCCAATCCATGAGC  344

seq1  ATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTCAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTCAGA  394

seq1  GACATGAAGTTCTTGTCATACAGATCTTTCACTTCCTTAGTTAGAGTCAC  448
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  GACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGTCAC  444

seq1  GCCAAGGAATTTTATATTATTTGTGGCTATTGAGAAGGGTGTTGTTTCCC  498
      ||||||  ||||||||||||||||| ||||||||||||||||||||||||
seq2  GCCAAGATATTTTATATTATTTGTGACTATTGAGAAGGGTGTTGTTTCCC  494

seq1  TAATTTCTTTCTCAGCCT  516
      ||||||||||||||||||
seq2  TAATTTCTTTCTCAGCCT  512

seq1: chr2_131762310_131763387
seq2: B6Ng01-140N05.g_67_1127 (reverse)

seq1  TACCCACCTCAGGGTGGCACCTGGGGGCAGCCCCACGGTGGTGGCTGGGG  50
      |||||| |||||||||||||| | || ||||||  | |||| |||| |||
seq2  TACCCA-CTCAGGGTGGCACC-GAGGACAGCCC--CCGTGG-GGCT-GGG  44

seq1  ACAACCCCATGGGGGCAGCTGGGGACAACCTCATGGTGGTAGTTGGGGTC  100
       ||| ||||| |||||||||  ||||||| |||| ||||||||| |||||
seq2  TCAA-CCCAT-GGGGCAGCT-TGGACAACTTCAT-GTGGTAGTT-GGGTC  89

seq1  AGCCCCATGGCGGTGGATGGGGCCAAGGAGGGGGTACCCATAATCAGTGG  150
      |||| | ||   |||||| | |||||||| ||||||||||||||||||||
seq2  AGCCACCTG--CGTGGAT-GAGCCAAGGA-GGGGTACCCATAATCAGTGG  135

seq1  AACAAGCCCAGCAAACCAAAAACCAACCTCAAGCATGTGGCAGGGGCTGC  200
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  AACAAGCCCAGCAAAC--AAAACCAACCTCAAGCATGTGGCAGGGGCTGC  183

seq1  GGCAGCTGGGGCAGTAGTGGGGGGCCTTGGTGGCTACATGCTGGGGAGCG  250
      ||||||| ||||||||||||||||||||||| ||||||||||| ||||||
seq2  GGCAGCT-GGGCAGTAGTGGGGGGCCTTGGT-GCTACATGCTGAGGAGCG  231

seq1  CCATGAGCAGG-CCCATGATCCATTTTGGCAACGACTGGGAGGACCGCTA  299
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  CCATGAGCAGGCCCCATAATCCATTTTGGCAACGACTGGGAGGACCGCTA  281

seq1  CTACCGTGAAAACATGTACCGCTACCCTAACCAAGTGTACTACAGGCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGTGAAAACATGTACCGCTACCCTAACCAAGTGTACTACAGGCCAG  331

seq1  TGGATCAGTACAGCAACCAGAACAACTTCGTGCACGACTGCGTCAATATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAGTACAGCAACCAGAACAACTTCGTGCACGACTGCGTCAATATC  381

seq1  ACCATC-AAGCAGCACACGGTCACCACCACCACCAAGGGGGAGAACTTCA  448
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAAAGCAGCACACGGTCACCACCACCACCAAGGGGGAGAACTTCA  431

seq1  CCGAGACCGATGTGAAGATGATGGAGCGCGTGGTGGAGCAGATGTGCGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGACCGATGTGAAGATGATGGAGCGCGTGGTGGAGCAGATGTGCGTC  481

seq1  ACCCAGTACCAGAAGGAGTCCCAGGCCTATTACGACGGGAGAAGATCCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTACCAGAAGGAGTCCCAGGCCTATTACGACGGGAGAAGATCCAG  531

seq1  CAGCACCGTGCTTTTCTCCTCCCCTCCTGTCATCCTCCTCATCTCCTTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCGTGCTTTTCTCCTCCCCTCCTGTCATCCTCCTCATCTCCTTCC  581

seq1  TCATCTTCCTGATCGTGGGATGAGGGAGGCCTTCCTGCTTGTTCCTTCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCTGATCGTGGGATGAGGGAGGCCTTCCTGCTTGTTCCTTCGC  631

seq1  ATTCTCGTGGTCTAGGCTGGGGGAGGGGTTATCCACCTGTAGCTCTTTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCGTGGTCTAGGCTGGGGGAGGGGTTATCCACCTGTAGCTCTTTCA  681

seq1  ATTGAGGTGGTTCTCATTCTTGCTTCTCTGTGTCCCCCATAGGCTAATAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGTGGTTCTCATTCTTGCTTCTCTGTGTCCCCCATAGGCTAATAC  731

seq1  CCCTGGCACTGATGGGCCCTGGGAAATGTACAGTAGACCAGTTGCTCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCACTGATGGGCCCTGGGAAATGTACAGTAGACCAGTTGCTCTTT  781

seq1  GCTTCAGGTCCCTTTGATGGAGTCTGTCATCAGCCAGTGCTAACACCGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGGTCCCTTTGATGGAGTCTGTCATCAGCCAGTGCTAACACCGGG  831

seq1  CCAATAAGAATATAACACCAAATAACTGCTGGCTAGTTGGGGCTTTGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAGAATATAACACCAAATAACTGCTGGCTAGTTGGGGCTTTGTTT  881

seq1  TGGTCTAGTGAATAAATACTGGTGTATCCCCTGACTTGTACCCAGAGTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAGTGAATAAATACTGGTGTATCCCCTGACTTGTACCCAGAGTAC  931

seq1  AAGGTGACAGTGACACATGTAACTTAGCATAGGCAAAGGGTTCTACAACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACAGTGACACATGTAACTTAGCATAGGCAAAGGGTTCTACAACC  981

seq1  AAAGAAGCCACTGTTTGGGGATGGCGCCCTGGAAAACAGCCTCCCACCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCCACTGTTTGGGGATGGCGCCCTGGAAAACAGCCTCCCACCTG  1031

seq1  GGATAGCTAGAGCATCCACACGTGGAATTC  1078
      ||||||||||||||||||||||||||||||
seq2  GGATAGCTAGAGCATCCACACGTGGAATTC  1061