BAC Information

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BAC

Clone NameB6Ng01-140P24
Chromosome10 (Build37)
Map Location 86,621,273 - 86,785,805
singlet/doubletdoublet
Overlap gene1700113H08Rik
Upstream geneSyn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
Downstream geneAscl1, Pah, LOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140P24.bB6Ng01-140P24.g
ACCDH939581DH939582
length4281,058
definitionDH939581|Mus musculus domesticus DNA, BAC clone: B6Ng01-140P24, 5' end.DH939582|Mus musculus domesticus DNA, BAC clone: B6Ng01-140P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,621,273 - 86,621,706)(86,785,182 - 86,785,805)
sequence
cagccttaactgtgccatttctcatcggaaccagttttaccgagggtaaa
atggatgtttacgaatgtagttgctttttgaacccccatcttgcaaatag
agcaaatgcagccccaggaagaacgggatgcagtccttctagctcaggct
ggctcatctgaagagagacagacaagccctgctgtggtcagatgactgca
gcagccccagcttccgtactctcactgggaagcccccattcaaggagttc
tgacaaaatttcacagtttgctgttgtcctgaactagtttctgtgcccaa
taggatgaagtgtgcagtgttgtgctcaaatataaatgtttgttttaccc
aaaccacaatgacccaaagttgtagtctggactcccaaattcatgaaagt
aaaatataagtgggatgggggtgggtgg
gaattccacatgagcagaacctggtgcaactgtatttaaaataaattaac
taccctctcccaacaccatactctaaccaaccttttaaaaaatgctgcca
gatgtccgagatgggatgtggagaccatatcctgatggtgggtatggaat
ttgaaagagaaggcttcatgccgataccctggtctgctaaaagcagagct
ggggcaagtaactctcacttatcaagccatgcaaatgcatctacaaaagg
aagacagggtcgtgggtgggtctaactgaaaactaaagatgcatggaaag
gtctgtggaaacaatctatttaaaatgctaatttcaaggtgcaattttga
aaagttcaaatggaattaccctgccagggggaataaaatcactactatag
gacatgggctagtaattggaaattgcagtgcagagcatggacacctctct
atgacttattaatcagagaggcctcagaggtctcaaacaacacaggacat
taccacattcccttgttacctaccataagtacatgctaagaccctactgc
taaagacaccgcacactttagctgcaggacatagagaaagcaatctcagt
aggacaggacatttcctccacgctggctagtgtttactgtgctaaaatat
gttaaagaagcttctgagaagaaagatgccaattatcctacccactgata
ggtactgcatgctacaggaccaatcctccagggaagatgtgctcattgaa
gcaaaagtggcatgactcagatggagcaactcaactgctttctgattaga
tctgagatctgttccaggaggagttcattttatgtcttgtattgtaactc
ctagtcaaatgctcatgggctgaggaggtcataggtccttatgggaagag
cctgctatgcattttgctgaacacttcttctgaatgtttctgatatattc
ataattggggggggtctctcaactttcaatagaaaacgttctttagctta
tatcagaagtcctgtcaccgaaatctggctggcatatgttatatgtcttg
ggtttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_86621273_86621706
seq2: B6Ng01-140P24.b_46_479

seq1  GAATTCCAGCCTTAACTGTGCCATTTCTCATCGGAACCAGTTTTACCGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTTAACTGTGCCATTTCTCATCGGAACCAGTTTTACCGAG  50

seq1  GGTAAAATGGATGTTTACGAATGTAGTTGCTTTTTGAACCCCCATCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATGGATGTTTACGAATGTAGTTGCTTTTTGAACCCCCATCTTGC  100

seq1  AAATAGAGCAAATGCAGCCCCAGGAAGAACGGGATGCAGTCCTTCTAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAGCAAATGCAGCCCCAGGAAGAACGGGATGCAGTCCTTCTAGCT  150

seq1  CAGGCTGGCTCATCTGAAGAGAGACAGACAAGCCCTGCTGTGGTCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCTCATCTGAAGAGAGACAGACAAGCCCTGCTGTGGTCAGATG  200

seq1  ACTGCAGCAGCCCCAGCTTCCGTACTCTCACTGGGAAGCCCCCATTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCAGCCCCAGCTTCCGTACTCTCACTGGGAAGCCCCCATTCAAG  250

seq1  GAGTTCTGACAAAATTTCACAGTTTGCTGTTGTCCTGAACTAGTTTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGACAAAATTTCACAGTTTGCTGTTGTCCTGAACTAGTTTCTGT  300

seq1  GCCCAATAGGATGAAGTGTGCAGTGTTGTGCTCAAATATAAATGTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATAGGATGAAGTGTGCAGTGTTGTGCTCAAATATAAATGTTTGTT  350

seq1  TTACCCAAACCACAATGACCCAAAGTTGTAGTCTGGACTCCCAAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAAACCACAATGACCCAAAGTTGTAGTCTGGACTCCCAAATTCAT  400

seq1  GAAAGTAAAATATAAGTGGGATGGGGGTGGGTGG  434
      ||||||||||||||||||||||||||||||||||
seq2  GAAAGTAAAATATAAGTGGGATGGGGGTGGGTGG  434

seq1: chr10_86785182_86785805
seq2: B6Ng01-140P24.g_496_1125 (reverse)

seq1  ACCAAACCC-AGACACTATTACATATGCCAGCAAGATTTTGGTGACAGGA  49
      ||||||||| ||||| ||| |||||||||||| |||||| ||||||||||
seq2  ACCAAACCCAAGACA-TATAACATATGCCAGCCAGATTTCGGTGACAGGA  49

seq1  C-TCTGATAT-AGCTAAAGGACGTTTTCCTAATTGAAGTTGAGAGACCCC  97
      | |||||||| |||||||| ||||||| ||| |  |||||||||||||||
seq2  CTTCTGATATAAGCTAAAGAACGTTTT-CTATTGAAAGTTGAGAGACCCC  98

seq1  CCCCAATTATGGATATAATCAGAAACATTCAGAAG-AGTGTTCAGCAAAA  146
      ||||||||||| |||| |||||||||||||||||| ||||||||||||||
seq2  CCCCAATTATGAATAT-ATCAGAAACATTCAGAAGAAGTGTTCAGCAAAA  147

seq1  TGCAATAGCAGGCTCTT-CCAT-AGGACCTATGACCTCCTCAG-CCATGG  193
      ||| ||||||||||||| |||| |||||||||||||||||||| ||||| 
seq2  TGC-ATAGCAGGCTCTTCCCATAAGGACCTATGACCTCCTCAGCCCATGA  196

seq1  GCATTTGACTAGG-GTTACAATACAAGGCATAAAATGAACTCCT-CTGGA  241
      ||||||||||||| ||||||||||||| |||||||||||||||| |||||
seq2  GCATTTGACTAGGAGTTACAATACAAGACATAAAATGAACTCCTCCTGGA  246

seq1  ACAGGTCTCAGATCTAATCAGAAAGCAGTTG-GTTGCTCCATCTGAGTCA  290
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACAGATCTCAGATCTAATCAGAAAGCAGTTGAGTTGCTCCATCTGAGTCA  296

seq1  TGCCACTTTTGCTTCAATGAGCACATCTTCCCTGGAGGATTGGTCCTGTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTTTTGCTTCAATGAGCACATCTTCCCTGGAGGATTGGTCCTGTA  346

seq1  GCATGCAGTACCTATCAGTGGGTAGGATAATTGGCATCTTTCTTCTCAGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGTACCTATCAGTGGGTAGGATAATTGGCATCTTTCTTCTCAGA  396

seq1  AGCTTCTTTAACATATTTTAGCACAGTAAACACTAGCCAGCGTGGAGGAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTTAACATATTTTAGCACAGTAAACACTAGCCAGCGTGGAGGAA  446

seq1  ATGTCCTGTCCTACTGAGATTGCTTTCTCTATGTCCTGCAGCTAAAGTGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGTCCTACTGAGATTGCTTTCTCTATGTCCTGCAGCTAAAGTGT  496

seq1  GCGGTGTCTTTAGCAGTAGGGTCTTAGCATGTACTTATGGTAGGTAACAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGTCTTTAGCAGTAGGGTCTTAGCATGTACTTATGGTAGGTAACAA  546

seq1  GGGAATGTGGTAATGTCCTGTGTTGTTTGAGACCTCTGAGGCCTCTCTGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGTGGTAATGTCCTGTGTTGTTTGAGACCTCTGAGGCCTCTCTGA  596

seq1  TTAATAAGTCATAGAGAGGTGTCCATGCTCTGCA  624
      ||||||||||||||||||||||||||||||||||
seq2  TTAATAAGTCATAGAGAGGTGTCCATGCTCTGCA  630