BAC Information

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BAC

Clone NameB6Ng01-141G19
Chromosome10 (Build37)
Map Location 103,592,001 - 103,593,100
singlet/doubletsinglet
Overlap genenone
Upstream geneLrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G19.bB6Ng01-141G19.g
ACCDH939887DH939888
length1,0881,150
definitionDH939887|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G19, 5' end.DH939888|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcaacagcatatttttagttattcactgagataaggcatgtca
aaaggttgaaaaagtatgtggaacattgactagtaatgatcttagtaaat
ctacggataaattcattttgaaagaatttaatttaaatgattttaaatta
cttaaaaatacttaaccatgagtgattgttaaggaatgaatttgaatctc
tttgtggttataaactttcataatatattatttaatgcagtaattttaaa
atagcaattctttatcattggcataatagaaatgttaatgtgtacataaa
tgaatattagtaaattatgttaaattatataataaaaataaaaatccgta
taaaatgcatatttattttagtaataaaatacaaagattctaaataactc
tgagatcagatcaatatggaatgctggtttcatctttgtttcatcattac
tttttcttactaaacatttcttcttgtggaaacatagagggattttaatt
ttacttttacctaatgtttaatttagctttacattttgtcctaatttggt
attgtaacagatttacataagagatatattccctgataacttgaaatgga
aaacaaagcttgctgtctgataccaaatttatgacactgttttatgaaac
cgatagtactagaaccatgaagacagtgtctaactactggatagactctt
ggatatggctgtgatatggcaagagaaaacacatgattttaatggaaact
gtgtcagtctaggagaaggctcctcctgcagtactacaagtggaaaggca
tttagaacagcaaggactcttttccagccttatgttgggattgaggtaaa
ccttctctctcaagatcttatgattatcattagttttttcaaatgtttat
aaaactgtattcttgtgagatattgaggctgtatatcagatgtattatca
aagtattatttcactatttttaaaccagtgtaatgaactcattcatatct
ataccttaaactactttagtcgattagtgattgcttgtatcagtcatcat
gatttactttaatctcctagccattgcaccaattctaa

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcatacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgatttga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacactattgcatacactagcaagattttactgaaa
ggatccagatgtagctgtctcttgtgagactatgcctggggcctagcaac
acagagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tgagagctagagaagtactcaggagctaaagggatctcaccctatagtgg
aacaacatatgactaccagtacctcgagctctgactctagctgcatagta
tcaaagatgggctagtcgccattcactgaagagaggcccatggaaccgcc
gaactttggtgtcctgttacagggacctcaggccaatggggaagagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103592001_103593100
seq2: B6Ng01-141G19.b_49_1136 (reverse)

seq1  TTAGAATTGGTGCAATGGCTAGGAGATTAAAGTAAAATACATAGATGACT  50
      ||||||||||||||||||||||||||||||||||||   ||| |||||||
seq2  TTAGAATTGGTGCAATGGCTAGGAGATTAAAGTAAA--TCAT-GATGACT  47

seq1  GATTACAAGCAAATCACTAAATCGACTAAAGTAAGTTTAAGGTAATAGAT  100
      || ||||||| ||||||| ||||||||||||| |||||||||| ||||||
seq2  GA-TACAAGC-AATCACT-AATCGACTAAAGT-AGTTTAAGGT-ATAGAT  92

seq1  ATGAATGAGTTCATTACACTGGTTTAAAAAATAGTGAAATAATACTTTTG  150
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  ATGAATGAGTTCATTACACTGGTTT-AAAAATAGTGAAATAATAC-TTTG  140

seq1  ATAATACATCTGATATACAGCCCTCAATTATCTTCACAAGAATACAGTTT  200
      |||||||||||||||||||| |||||| |||| |||||||||||||||||
seq2  ATAATACATCTGATATACAG-CCTCAA-TATC-TCACAAGAATACAGTTT  187

seq1  TATAAAACATTTGAAAAAACTAATGATAATCATAAGATCTTG-GGGAGAA  249
      ||| |||||||||||||||||||||||||||||||||||||| | |||||
seq2  TAT-AAACATTTGAAAAAACTAATGATAATCATAAGATCTTGAGAGAGAA  236

seq1  GGTTTACCTCAATCCCAACATAAGGCTGGAAAAGAGTCCTTGCTGTTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACCTCAATCCCAACATAAGGCTGGAAAAGAGTCCTTGCTGTTCTA  286

seq1  AATGCC-TTCCACTTGTGGTACTGCAGGAGGAGCCTTCTCCTAGACTGAC  348
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  AATGCCTTTCCACTTGTAGTACTGCAGGAGGAGCCTTCTCCTAGACTGAC  336

seq1  ACAGTTTCCATTAAAATCATGTGTTTTCTCTTGCCATATCACAGCCATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCCATTAAAATCATGTGTTTTCTCTTGCCATATCACAGCCATAT  386

seq1  CCAAGAGTCTTTCCAGTAGTTAGACACTGTCTTCATGGTTCTAGTACTAT  448
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTCTATCCAGTAGTTAGACACTGTCTTCATGGTTCTAGTACTAT  436

seq1  CGGTTTCATAAAACAGTGTCATAAATTTGGTATCAGACAGCAAGCTTTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTCATAAAACAGTGTCATAAATTTGGTATCAGACAGCAAGCTTTGT  486

seq1  TTTCCATTTCAAGTTATCAGGGAATATATCTCTTATGTAAATCTGTTACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTCAAGTTATCAGGGAATATATCTCTTATGTAAATCTGTTACA  536

seq1  ATACCAAATTAGGACAAAATGTAAAGCTAAATTAAACATTAGGTAAAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAATTAGGACAAAATGTAAAGCTAAATTAAACATTAGGTAAAAGT  586

seq1  AAAATTAAAATCCCTCTATGTTTCCACAAGAAGAAATGTTTAGTAAGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAATCCCTCTATGTTTCCACAAGAAGAAATGTTTAGTAAGAAA  636

seq1  AAGTAATGATGAAACAAAGATGAAACCAGCATTCCATATTGATCTGATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGATGAAACAAAGATGAAACCAGCATTCCATATTGATCTGATCT  686

seq1  CAGAGTTATTTAGAATCTTTGTATTTTATTACTAAAATAAATATGCATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTATTTAGAATCTTTGTATTTTATTACTAAAATAAATATGCATTT  736

seq1  TATACGGATTTTTATTTTTATTATATAATTTAACATAATTTACTAATATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGGATTTTTATTTTTATTATATAATTTAACATAATTTACTAATATT  786

seq1  CATTTATGTACACATTAACATTTCTATTATGCCAATGATAAAGAATTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGTACACATTAACATTTCTATTATGCCAATGATAAAGAATTGCT  836

seq1  ATTTTAAAATTACTGCATTAAATAATATATTATGAAAGTTTATAACCACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATTACTGCATTAAATAATATATTATGAAAGTTTATAACCACA  886

seq1  AAGAGATTCAAATTCATTCCTTAACAATCACTCATGGTTAAGTATTTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTCAAATTCATTCCTTAACAATCACTCATGGTTAAGTATTTTTA  936

seq1  AGTAATTTAAAATCATTTAAATTAAATTCTTTCAAAATGAATTTATCCGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTAAAATCATTTAAATTAAATTCTTTCAAAATGAATTTATCCGT  986

seq1  AGATTTACTAAGATCATTACTAGTCAATGTTCCACATACTTTTTCAACCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACTAAGATCATTACTAGTCAATGTTCCACATACTTTTTCAACCT  1036

seq1  TTTGACATGCCTTATCTCAGTGAATAACTAAAAATATGCTGTTGAGGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACATGCCTTATCTCAGTGAATAACTAAAAATATGCTGTTGAGGAAT  1086

seq1  TC  1100
      ||
seq2  TC  1088


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