BAC Information

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BAC

Clone NameB6Ng01-141O02
Chromosome10 (Build37)
Map Location 14,260,904 - 14,403,550
singlet/doubletdoublet
Overlap geneGpr126, LOC100039409, Vta1
Upstream genePex3, Deadc1, Aig1, EG666859, Hivep2, LOC100039571
Downstream geneD230044M03Rik, EG666904, Nmbr, LOC666917, LOC637043, LOC100039492
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141O02.bB6Ng01-141O02.g
ACCDH940220DH940221
length797916
definitionDH940220|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O02, 5' end.DH940221|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,260,904 - 14,261,700)(14,402,691 - 14,403,550)
sequence
gaattcacttcctcgaccacatccctgctgtgtttctctggtaaatcttt
tcataaagggttttgggagtgacagagaacaccttgagattctatgggga
taaaagaacagtaatttaacatattcaagcctacttataataacatttct
tccttcagtgaaagatcgtgttcccgagactaagctatgcatagaggaga
gaaagtgctatcctgttactgaagtgagacccctttattaagttggctcc
accccacaccactactaaagtctcacttactgttcaggtcttcacaaagc
cttccttatttgaatatgtatgactggctcataccatgaagtcaccttga
gaatttatacaaatgggtgcacacacacacatacacacacacacatacag
gaacacacaggcacacacacatgaatggatacacacatgtagacactcag
taaactgggagagataactctaatttatcaacatctttttttttcctatt
ttgctctattgttttgtaaaatgttcttaataaaaattagccaatggata
tatgggatattgcaattttttacaaatataattgaatctacaattatctt
aaaaattttcaattgaaaaaattaaatctttgatgtgtgcaacatgattt
cagaaaattctgaaaaagacaaaattatagggtaggtgcatgcaggaaat
gagcgaaacaaatgatgttacaaatgataatacataacccttgggaaaag
aatacttagttgttccttgcattggggtgtgtgtgtgtgtgtgtgtg
gaattctattgatagcatgtaatatttacttgagaaaaataagcgatggg
caggagaggcagctcagcagttaggtgcactggctgctctttctaatgtg
aaagtatagaaaaagacatgtcccataaatactaagtgaccagaaggcaa
gtagcaataataaacaaagtcagctttaaagaacgtattagtgatggcaa
aacaagacatctcatagtagtcatgggtcgcttcatgaagaatattcaca
tgcttaaagattgatcccatgtgtaactgtactgtgaaaatgtacagtta
caagtgtctgtatacttaataataggattttcaaattacatgaaatcctt
aaaaatgtattatcattgttggagagtttaaaaacctcagtcactgatta
aaaaaagcaaacactttctttaacaatcagtaaaattaaccagacaaata
aggactggccatggaatgtttagaatgaagaaaaaccagacctttcagac
ttagcttagtggaaatgttagatgttacagctgcttagtggaaagaattg
gcagattttataaaattaaacagactcccacctttttacccagcaattcc
ttttctgatacttacccaagagaaataaaaacatatgtctagaaaaagaa
cttgctcattgaaaacttacttataatagccaaaatcttggcacaacata
gatatctacatctgaataaatattaaacaaaattgtgatgttactcaata
taatacagaatcagcaacttgtagcctagaatatggataaatcctgtaga
tttgctgatcaaaggagagtcaagtggtgtactgtgcatggttgcctgta
tatatgtatagctacagacagttcatagtataaaaaaatgaaaaatactt
tttaggtatttttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14260904_14261700
seq2: B6Ng01-141O02.b_50_846

seq1  GAATTCACTTCCTCGACCACATCCCTGCTGTGTTTCTCTGGTAAATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCCTCGACCACATCCCTGCTGTGTTTCTCTGGTAAATCTTT  50

seq1  TCATAAAGGGTTTTGGGAGTGACAGAGAACACCTTGAGATTCTATGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGGGTTTTGGGAGTGACAGAGAACACCTTGAGATTCTATGGGGA  100

seq1  TAAAAGAACAGTAATTTAACATATTCAAGCCTACTTATAATAACATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAACAGTAATTTAACATATTCAAGCCTACTTATAATAACATTTCT  150

seq1  TCCTTCAGTGAAAGATCGTGTTCCCGAGACTAAGCTATGCATAGAGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGTGAAAGATCGTGTTCCCGAGACTAAGCTATGCATAGAGGAGA  200

seq1  GAAAGTGCTATCCTGTTACTGAAGTGAGACCCCTTTATTAAGTTGGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCTATCCTGTTACTGAAGTGAGACCCCTTTATTAAGTTGGCTCC  250

seq1  ACCCCACACCACTACTAAAGTCTCACTTACTGTTCAGGTCTTCACAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACACCACTACTAAAGTCTCACTTACTGTTCAGGTCTTCACAAAGC  300

seq1  CTTCCTTATTTGAATATGTATGACTGGCTCATACCATGAAGTCACCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTATTTGAATATGTATGACTGGCTCATACCATGAAGTCACCTTGA  350

seq1  GAATTTATACAAATGGGTGCACACACACACATACACACACACACATACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATACAAATGGGTGCACACACACACATACACACACACACATACAG  400

seq1  GAACACACAGGCACACACACATGAATGGATACACACATGTAGACACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACAGGCACACACACATGAATGGATACACACATGTAGACACTCAG  450

seq1  TAAACTGGGAGAGATAACTCTAATTTATCAACATCTTTTTTTTTCCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGGGAGAGATAACTCTAATTTATCAACATCTTTTTTTTTCCTATT  500

seq1  TTGCTCTATTGTTTTGTAAAATGTTCTTAATAAAAATTAGCCAATGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTATTGTTTTGTAAAATGTTCTTAATAAAAATTAGCCAATGGATA  550

seq1  TATGGGATATTGCAATTTTTTACAAATATAATTGAATCTACAATTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGATATTGCAATTTTTTACAAATATAATTGAATCTACAATTATCTT  600

seq1  AAAAATTTTCAATTGAAAAAATTAAATCTTTGATGTGTGCAACATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTCAATTGAAAAAATTAAATCTTTGATGTGTGCAACATGATTT  650

seq1  CAGAAAATTCTGAAAAAGACAAAATTATAGGGTAGGTGCATGCAGGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTCTGAAAAAGACAAAATTATAGGGTAGGTGCATGCAGGAAAT  700

seq1  GAGCGAAACAAATGATGTTACAAATGATAATACATAACCCTTGGGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAAACAAATGATGTTACAAATGATAATACATAACCCTTGGGAAAAG  750

seq1  AATACTTAGTTGTTCCTTGCATTGGGGTGTGTGTGTGTGTGTGTGTG  797
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAGTTGTTCCTTGCATTGGGGTGTGTGTGTGTGTGTGTGTG  797

seq1: chr10_14402691_14403550
seq2: B6Ng01-141O02.g_68_925 (reverse)

seq1  TACATTATATACAGGCAACCATGCACAGTACACCACTTGACTCTTCTTTT  50
      |||| |||||||||||||||||||||||||||||||||||||| || |||
seq2  TACA-TATATACAGGCAACCATGCACAGTACACCACTTGACTC-TCCTTT  48

seq1  GATCAGCAAATCTACAGGATTTATCCATATTCTAGGCTACAAGTTGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCAAATCTACAGGATTTATCCATATTCTAGGCTACAAGTTGCTGA  98

seq1  TTCTGTATTATATTGAGTAACATCACAATTTTGTTTAATATTTATTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATTATATTGAGTAACATCACAATTTTGTTTAATATTTATTCAGA  148

seq1  TGTAGATATCTATGTTGTGCCAAGATTTTGGCTATTATAAGTAAGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATCTATGTTGTGCCAAGATTTTGGCTATTATAAGTAAGTTTTC  198

seq1  AATGAGCAAGTTCTTTTTCTAGACATATGTTTTTATTTCTCTTGGGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCAAGTTCTTTTTCTAGACATATGTTTTTATTTCTCTTGGGTAAG  248

seq1  TATCAGAAAAGGAATTGCTGGGTAAAAAGGTGGGAGTCTGTTTAATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAAAGGAATTGCTGGGTAAAAAGGTGGGAGTCTGTTTAATTTTA  298

seq1  TAAAATCTGCCAATTCTTTCCACTAAGCAGCTGTAACATCTAACATTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTGCCAATTCTTTCCACTAAGCAGCTGTAACATCTAACATTTCC  348

seq1  ACTAAGCTAAGTCTGAAAGGTCTGGTTTTTCTTCATTCTAAACATTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCTAAGTCTGAAAGGTCTGGTTTTTCTTCATTCTAAACATTCCAT  398

seq1  GGCCAGTCCTTATTTGTCTGGTTAATTTTACTGATTGTTAAAGAAAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCCTTATTTGTCTGGTTAATTTTACTGATTGTTAAAGAAAGTGT  448

seq1  TTGCTTTTTTTAATCAGTGACTGAGGTTTTTAAACTCTCCAACAATGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTTTAATCAGTGACTGAGGTTTTTAAACTCTCCAACAATGATA  498

seq1  ATACATTTTTAAGGATTTCATGTAATTTGAAAATCCTATTATTAAGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTTAAGGATTTCATGTAATTTGAAAATCCTATTATTAAGTATA  548

seq1  CAGACACTTGTAACTGTACATTTTCACAGTACAGTTACACATGGGATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTTGTAACTGTACATTTTCACAGTACAGTTACACATGGGATCAA  598

seq1  TCTTTAAGCATGTGAATATTCTTCATGAAGCGACCCATGACTACTATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGCATGTGAATATTCTTCATGAAGCGACCCATGACTACTATGAG  648

seq1  ATGTCTTGTTTTGCCATCACTAATACGTTCTTTAAAGCTGACTTTGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGTTTTGCCATCACTAATACGTTCTTTAAAGCTGACTTTGTTTA  698

seq1  TTATTGCTACTTGCCTTCTGGTCACTTAGTATTTATGGGACATGTCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTACTTGCCTTCTGGTCACTTAGTATTTATGGGACATGTCTTTT  748

seq1  TCTATACTTTCACATTAGAAAGAGCAGCCAGTGCACCTAACTGCTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTTTCACATTAGAAAGAGCAGCCAGTGCACCTAACTGCTGAGCT  798

seq1  GCCTCTCCTGCCCATCGCTTATTTTTCTCAAGTAAATATTACATGCTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCTGCCCATCGCTTATTTTTCTCAAGTAAATATTACATGCTATC  848

seq1  AATAGAATTC  860
      ||||||||||
seq2  AATAGAATTC  858