BAC Information

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BAC

Clone NameB6Ng01-143F04
Chromosome10 (Build37)
Map Location 31,355,081 - 31,355,869
singlet/doubletsinglet
Overlap genenone
Upstream geneNcoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055
Downstream geneLOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143F04.bB6Ng01-143F04.g
ACCDH941289DH941290
length1,169753
definitionDH941289|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F04, 5' end.DH941290|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagttggtcatgaatatggcattaaggactcttcttgtgaatg
ctcggaagcacacaaaggcagcatgcttaaattttcaaaggaattgcttc
gaccagtggttctcaacctgtgattcttgacccccttttggaggggaatc
aatgaccctttcacaggggtcatgtaacaccattggaaatatcagatatt
tacattatgattgataatagtagcaaaattaaaagttatgaagtagtaac
aaaaataacttttatgcttggcaggtcattataacatgagcaactgtatt
aaagggccatagcgttaggaaggatgagaaggactcgcttaagtggtcat
gatcatgctgttggtagaaatgtagacagtagattcaactctggtgaagg
cacagacagaaaggaggaacagggtattgggaagggaaagtcattcttgt
tacatagttgtgaaacctcacagaagtgtatctgtgtccaaagactgtat
ggaaatcagaatttaaaagctgagctctcattgatgaaatgtgtgacagc
aaagtatttaagacatcatatgacttaagactgtatgattgaaggccctg
cacttgtgtaagccattgcttcgtttgaggtactgcatggtttctttttc
ttattttggctacttacagtgaaaggagagaagaaattatttaagaaaag
caattaaaagagaaacaggagaagtttagataactcttagcttggctgta
tgaaagggtgaaaaatgtgtgtcctggagagagaatatcagaggtacagc
caagtgatcatttgctaaagagattaatacagacaaagaagagcgaggtg
tcatttgccaaggcaaaggaagaataattccaaagatgttttaagatcct
taagcaagtgataagctggaggaaatggtgctcaagaatgactatagaac
atttgtatataatttttttctttaattctgcacagtcctcctgagctacc
ctagtcacacatgaaataagcacccaggtggagctgttctccaaaagtac
aagtcataaaacttgatgtatcaatacccagacttggacatgtgacctcc
actaaattccagaagttgtagacaggcttgggagtcaggcctgaatctac
cgtcggagagactcatggc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcgaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggagctttgggactctta
tggaagagtaggatgaaggattgagggccccaaaaagaatagggactctg
caggaagactaacagagccaactaacctggacccttggagctcttagagt
ctgaaccaccaaccaaaaagaatacgctggctggacctaggcctccccca
catatgtagcggatgtgcagcttggtcttcatgtagatctggaacaaatg
gaatggagactatcccaaaagctattgcctatctgtgggatatgttcttc
taggtgggctgcctcatctggcctcactgggagagaaagggcctagcccc
acagagacttgatgtgtcaggtttggggaatacccagagggcccctacct
tctccgggtagaaagggaagaaaagtgggggaaggattttgagagggggg
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31355081_31355869
seq2: B6Ng01-143F04.b_455_1216

seq1  AGAAAGGAGGAACAGGGTATTGGGAAGGGAAAGTCATTCTTGTTACATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGGAACAGGGTATTGGGAAGGGAAAGTCATTCTTGTTACATAG  50

seq1  TTGTGAAACCTCACAGAAGTGTATCTGTGTCCAAAGACTGTATGGAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAACCTCACAGAAGTGTATCTGTGTCCAAAGACTGTATGGAAATC  100

seq1  AGAATTTAAAAGCTGAGCTCTCATTGATGAAATGTGTGACAGCAAAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAAAGCTGAGCTCTCATTGATGAAATGTGTGACAGCAAAGTAT  150

seq1  TTAAGACATCATATGACTTAAGACTGTATGATTGAAGGCCCTGCACTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACATCATATGACTTAAGACTGTATGATTGAAGGCCCTGCACTTGT  200

seq1  GTAAGCCATTGCTTCGTTTGAGGTACTGCATGGTTTCTTTTTCTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCATTGCTTCGTTTGAGGTACTGCATGGTTTCTTTTTCTTATTTT  250

seq1  GGCTACTTACAGTGAAAGGAGAGAAGAAATTATTTAAGAAAAGCAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTTACAGTGAAAGGAGAGAAGAAATTATTTAAGAAAAGCAATTAA  300

seq1  AAGAGAAACAGGAGAAGTTTAGATAACTCTTAGCTTGGCTGTATGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAACAGGAGAAGTTTAGATAACTCTTAGCTTGGCTGTATGAAAGG  350

seq1  GTGAAAAATGTGTGTCCTGGAGAGAGAATATCAGAGGTACAGCCAAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAATGTGTGTCCTGGAGAGAGAATATCAGAGGTACAGCCAAGTGA  400

seq1  TCATTTGCTAAAGAGATTAATACAGACAAAGAAGAGCGAGGTGTCATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCTAAAGAGATTAATACAGACAAAGAAGAGCGAGGTGTCATTTG  450

seq1  CCAAGGCAAAGGAAGAATAATTCCAAAGATGTTTTAAGATCCTTAAGGCA  500
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCAAGGCAAAGGAAGAATAATTCCAAAGATGTTTTAAGATCCTTAA-GCA  499

seq1  AGTGATAAGCTGGAGGAAATGGTTGCTCAAGAATGACTATAGAACATTTG  550
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTGATAAGCTGGAGGAAATGG-TGCTCAAGAATGACTATAGAACATTTG  548

seq1  TATATAATTTTTTTTCTTTAATTCTGGCACAGTCCTCCTGAGCTACCCTA  600
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  TATATAA-TTTTTTTCTTTAATTCT-GCACAGTCCTCCTGAGCTACCCTA  596

seq1  GTCACACATGACATAAGCAACCCAGGTGAGCCTGTTTCTCCCAAAAGTAC  650
      ||||||||||| |||||| |||||||||   ||| |||| ||||||||||
seq2  GTCACACATGAAATAAGC-ACCCAGGTGGAGCTG-TTCT-CCAAAAGTAC  643

seq1  AAGTCATAAAACTTTGATGTTATCCATACCACAAGACCTTTGGGACCATG  700
      |||||||||||| |||||| |||| ||||  | ||||  ||||   ||| 
seq2  AAGTCATAAAAC-TTGATG-TATCAATAC--CCAGAC--TTGG--ACAT-  684

seq1  GTGACCTCCACCTAAATTTCACAGGATGTTGTAGACAGGCTTGGGGAAGT  750
      |||||||||| ||||||| ||   || ||||||||||||||||||  |||
seq2  GTGACCTCCA-CTAAATTCCA---GAAGTTGTAGACAGGCTTGGG--AGT  728

seq1  CAGCTCTGAATGCTACCGTGTAGGAGAGACTTTCATGGC  789
      |||  |||||| |||||  || ||||||||  |||||||
seq2  CAGGCCTGAAT-CTACC--GTCGGAGAGAC--TCATGGC  762