BAC Information

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BAC

Clone NameB6Ng01-143K10
Chromosome10 (Build37)
Map Location 89,567,593 - 89,629,496
singlet/doubletdoublet
Overlap geneAnks1b, LOC544719
Upstream geneTmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143K10.bB6Ng01-143K10.g
ACCDH941531DH941532
length4611,080
definitionDH941531|Mus musculus domesticus DNA, BAC clone: B6Ng01-143K10, 5' end.DH941532|Mus musculus domesticus DNA, BAC clone: B6Ng01-143K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,567,593 - 89,568,059)(89,628,440 - 89,629,496)
sequence
tacacatatttcagttgctccatgcctttgtagggatatcataggtcttt
taaagtttagccactctggtgggtgtctactgctctcactgtgattttaa
tttgtgcttttctgaaaattacctacttaatataattttgttctattatt
tgctatattttgtatatcatttttggtgaaatgcctgttccagcttcttt
tgttttaaattagattttatatatttattcaattaaaagaatatatatct
taatgagctccttatcagatttatggtatataaagttattttcacactct
atatagattgctttttaattttgatgacaatatattttaaaggccaaact
taaaaaaatttgaagtctaatctaatattcatatgtgtctctctgtgtgt
atcacacatgcattgaaaagagggagggagtaggatagggagagggacag
agggtgggagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaagaatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaggatcctgcaatacctcacctgggc
atatatccagaagatgttccaaccagtaagaaggacaaatactccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtagtacatttacacaatg
gagtgctactcacctattaaaaagaatgaattaatcctgaataaattaaa
gataataattttaagatatttaaaatatgcttacttctggatgagtaaat
catgtgcttggaaaatcctctggaatgaaataaaagcagtgggcttgaag
atgatgcaatttctaaaatatataaaatacacacaggactggtgggatgg
cttagcaggtactacacaagcccaccagcttgagttttatcctggaatct
atataaaggtggtagaaaagaaccaattcgtcaaagttgtcctctaagct
tcacacatgcacaatggtacatgtacccatacatactagtaataatgaat
gcaatttaaaatagatgtgtgtgtattaattgtaaaactgcaaaatccct
tcacatactttttgaaataaaaatctataaacatacatatggctcactta
tgtgtatacataggcttgttaaaggaaaacccatggataatagtatccag
aaacataaaatacacattttcaagaacttatatgaggagagcattagtaa
gagaccaatttcagattgctggatcaatcattaaaaatactgcatcatag
gacttttatatttaatatagccacaattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89567593_89568059
seq2: B6Ng01-143K10.b_47_513

seq1  GAATTCTACACATATTTCAGTTGCTCCATGCCTTTGTAGGGATATCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACATATTTCAGTTGCTCCATGCCTTTGTAGGGATATCATAG  50

seq1  GTCTTTTAAAGTTTAGCCACTCTGGTGGGTGTCTACTGCTCTCACTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTAAAGTTTAGCCACTCTGGTGGGTGTCTACTGCTCTCACTGTGA  100

seq1  TTTTAATTTGTGCTTTTCTGAAAATTACCTACTTAATATAATTTTGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTGTGCTTTTCTGAAAATTACCTACTTAATATAATTTTGTTCT  150

seq1  ATTATTTGCTATATTTTGTATATCATTTTTGGTGAAATGCCTGTTCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCTATATTTTGTATATCATTTTTGGTGAAATGCCTGTTCCAGC  200

seq1  TTCTTTTGTTTTAAATTAGATTTTATATATTTATTCAATTAAAAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTTTAAATTAGATTTTATATATTTATTCAATTAAAAGAATAT  250

seq1  ATATCTTAATGAGCTCCTTATCAGATTTATGGTATATAAAGTTATTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAATGAGCTCCTTATCAGATTTATGGTATATAAAGTTATTTTCA  300

seq1  CACTCTATATAGATTGCTTTTTAATTTTGATGACAATATATTTTAAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATATAGATTGCTTTTTAATTTTGATGACAATATATTTTAAAGGC  350

seq1  CAAACTTAAAAAAATTTGAAGTCTAATCTAATATTCATATGTGTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAAAAAAATTTGAAGTCTAATCTAATATTCATATGTGTCTCTCT  400

seq1  GTGTGTATCACACATGCATTGAAAAGAGGGAGGGAGTAGGATAGGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATCACACATGCATTGAAAAGAGGGAGGGAGTAGGATAGGGAGAG  450

seq1  GGACAGAGGGTGGGAGG  467
      |||||||||||||||||
seq2  GGACAGAGGGTGGGAGG  467

seq1: chr10_89628440_89629496
seq2: B6Ng01-143K10.g_99_1147 (reverse)

seq1  TTAATTGTTGCTATATTAAATATAAAAGTTCCTTATGATGCAGTATTTTT  50
      |||||||| ||||||||||||||||||||  | ||||||||||||  |||
seq2  TTAATTGTGGCTATATTAAATATAAAAGT--CCTATGATGCAGTA--TTT  46

seq1  TTAATTGGATTTGATCCAGCAATCTGGAAATGGGTCTCTTACTAATGCTC  100
      |||||  || ||||||||||||||| ||||| ||||||||||||||||||
seq2  TTAAT--GA-TTGATCCAGCAATCT-GAAATTGGTCTCTTACTAATGCTC  92

seq1  TCCTCATATAAGTTCTTGAAAATGTGTATTTTATGTATCTGGATACTATT  150
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTCATATAAGTTCTTGAAAATGTGTATTTTATGTTTCTGGATACTATT  142

seq1  ATCCATGGGTTCTCCTTTAACAAGCCTATGTATACACATAAGTGAGCCAT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGGGTTTTCCTTTAACAAGCCTATGTATACACATAAGTGAGCCAT  192

seq1  ATGTATGTTTATAGATTTTTATTTCAAAAAGTATGTGAAGGGATTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTTTATAGATTTTTATTTCAAAAAGTATGTGAAGGGATTTTGCA  242

seq1  GTTTTACAATTAATACACACACATCTATTTTAAATTGCATTCATTATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAATTAATACACACACATCTATTTTAAATTGCATTCATTATTAC  292

seq1  TAGTATGTATGGGTACATGTACCATTGTGCATGTGTGAAGCTTAGAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATGTATGGGTACATGTACCATTGTGCATGTGTGAAGCTTAGAGGAC  342

seq1  AACTTTGACGAATTGGTTCTTTTCTACCACCTTTATATAGATTCCAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGACGAATTGGTTCTTTTCTACCACCTTTATATAGATTCCAGGAT  392

seq1  AAAACTCAAGCTGGTGGGCTTGTGTAGTACCTGCTAAGCCATCCCACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAAGCTGGTGGGCTTGTGTAGTACCTGCTAAGCCATCCCACCAG  442

seq1  TCCTGTGTGTATTTTATATATTTTAGAAATTGCATCATCTTCAAGCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGTATTTTATATATTTTAGAAATTGCATCATCTTCAAGCCCAC  492

seq1  TGCTTTTATTTCATTCCAGAGGATTTTCCAAGCACATGATTTACTCATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTTCATTCCAGAGGATTTTCCAAGCACATGATTTACTCATCC  542

seq1  AGAAGTAAGCATATTTTAAATATCTTAAAATTATTATCTTTAATTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAGCATATTTTAAATATCTTAAAATTATTATCTTTAATTTATTC  592

seq1  AGGATTAATTCATTCTTTTTAATAGGTGAGTAGCACTCCATTGTGTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAATTCATTCTTTTTAATAGGTGAGTAGCACTCCATTGTGTAAAT  642

seq1  GTACTACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTT  692

seq1  TCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGTAT  742

seq1  TTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCAGGTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCAGGTGAGG  792

seq1  TATTGCAGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCC  842

seq1  AGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGG  892

seq1  AGGAGTGTTCCTCTTTCTCCACATTCTTGCCAGCATCTGCTGTCACCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTTCCTCTTTCTCCACATTCTTGCCAGCATCTGCTGTCACCTGA  942

seq1  ATTTTTGATCTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAGGGTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGATCTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAGGGTTG  992

seq1  TTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGG  1042

seq1  TGCTTCT  1057
      |||||||
seq2  TGCTTCT  1049