BAC Information

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BAC

Clone NameB6Ng01-143L19
Chromosome10 (Build37)
Map Location 122,448,365 - 122,449,521
singlet/doubletsinglet
Overlap geneMon2
Upstream geneSrgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik
Downstream geneUsp15, LOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143L19.bB6Ng01-143L19.g
ACCDH941595DH941596
length1,141856
definitionDH941595|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L19, 5' end.DH941596|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaaatgacaacatttttctgatagaaaccctttttcattcac
ttcagggaaaggcataagcaatgtagctgtgtgatctagtcagagggaaa
gtactgtggtctgaataggcttggtccccacacactcatgtgtttgaatg
cttggcccatgagtagcactattaggaggtgtggccttgttggaggaagt
gtgtcactgtggaaagagggctttgaggtgtcatatgtatctcaagttag
gccagcgtggatggcagtctcctcctggctgcctgtggatcaagatgtag
agtactcctgtgatgcctgcctgtaagctgccatacatcctgcctggatg
acaatggagtgaacatctatgaaccaggtccaactaaatgatgtccttaa
tatgagttgtcttggtcatgctgtccattcacagcaataaaatcctaaca
caaggatgatgaactacaaacttactttgagtcatagaaattcatgtccc
tcaaacagtattgaatgtcagattgtgttaatttctcatcttagtcacaa
tttgtttcctgaacaatggaactatggttaaatagataaagactattgct
tagtctgcctgccttcagggcagtgtaggggtgctgtggtcatgtccagg
gaataaaggagccaggactagagagtaggactgtctccttacaaatgagc
cttgatgacagaccatgactctctcacgtcttggctgattactgagttgg
ccttttctgttaatgtttgcttcctgacatagtctcacattgtaatcaag
ggtgggttcaaacttcatgcaaacctttcctgtagcagatttccaagtgc
tgggaatataacttttcttttcttctttttctagcacatttatacatgta
tatgttcataccttgtaatgtgtgtggagggcacaactttggaagttctc
ctgccatgtggtcctagggacatatacggcttgcggcaagctctttactg
ctagcaatcctgttagccctgtttagatctgatgttatgaactggaggta
gcaattttcttggatatctaaaaatgctttattttgattatggttgcttc
caagcctggatttatcactattttttctatctatttattga

gaattcagtttttgaacaagtatgaagttatcttcacttaaaagaaatga
agccaaatcttccagtatcagagaactagtacatagaaggggggatgtat
atgattaaggaagttggattttctatggaagtatacaattatttcttgcc
cttctcatgaatctctctgtagttcggtccagtagcagactgtggcagtc
ttggaccatcacaagtttataaaaacataattaacataatccaagagttc
ctgtgcagaagcatactggctagcataggaaacaatgagaaatgttttta
taacatcaccaagcttgcttttcttcaccactggcgtcttctaactttac
ccaagcctgctgcatgttcagtagtgtctgttacaggatatgatatcata
ctgtgaccccccaagattgtgttgtttactgagaaaacctgtttcctgtt
gtggtgtggcttagtccttagaacacaactttattcccaaacaatgaaga
taaagttaacttatagaaggaagtgccgatgtttgacagtgatgtctgag
tggcagacaaagtggcaaatgagagaaagatttgacagaatagggatatg
cccagctctcacaagaagagaggggaaaggggagcaacttaagggtctgg
gcagagagggggaaggagacgtttttattgcaacagtttatagagacggg
ttgcagaaagagcgaacaagctagacacaggtgaagacagaccagccaga
gatgagaatggagtcagattaggacagattgccagagttagtctgtgacc
agcagagcaattctgagctgagagagagaagccaggttgaatcactcagt
tcgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122448365_122449521
seq2: B6Ng01-143L19.b_46_1186

seq1  GAATTCTCCAAATGACAACATTTTTCTGATAGAAACCCTTTTTCATTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAATGACAACATTTTTCTGATAGAAACCCTTTTTCATTCAC  50

seq1  TTCAGGGAAAGGCATAAGCAATGTAGCTGTGTGATCTAGTCAGAGGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGAAAGGCATAAGCAATGTAGCTGTGTGATCTAGTCAGAGGGAAA  100

seq1  GTACTGTGGTCTGAATAGGCTTGGTCCCCACACACTCATGTGTTTGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGGTCTGAATAGGCTTGGTCCCCACACACTCATGTGTTTGAATG  150

seq1  CTTGGCCCATGAGTAGCACTATTAGGAGGTGTGGCCTTGTTGGAGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCATGAGTAGCACTATTAGGAGGTGTGGCCTTGTTGGAGGAAGT  200

seq1  GTGTCACTGTGGAAAGAGGGCTTTGAGGTGTCATATGTATCTCAAGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACTGTGGAAAGAGGGCTTTGAGGTGTCATATGTATCTCAAGTTAG  250

seq1  GCCAGCGTGGATGGCAGTCTCCTCCTGGCTGCCTGTGGATCAAGATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGTGGATGGCAGTCTCCTCCTGGCTGCCTGTGGATCAAGATGTAG  300

seq1  AGTACTCCTGTGATGCCTGCCTGTAAGCTGCCATACATCCTGCCTGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCCTGTGATGCCTGCCTGTAAGCTGCCATACATCCTGCCTGGATG  350

seq1  ACAATGGAGTGAACATCTATGAACCAGGTCCAACTAAATGATGTCCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAGTGAACATCTATGAACCAGGTCCAACTAAATGATGTCCTTAA  400

seq1  TATGAGTTGTCTTGGTCATGCTGTCCATTCACAGCAATAAAATCCTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTGTCTTGGTCATGCTGTCCATTCACAGCAATAAAATCCTAACA  450

seq1  CAAGGATGATGAACTACAAACTTACTTTGAGTCATAGAAATTCATGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGATGAACTACAAACTTACTTTGAGTCATAGAAATTCATGTCCC  500

seq1  TCAAACAGTATTGAATGTCAGATTGTGTTAATTTCTCATCTTAGTCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGTATTGAATGTCAGATTGTGTTAATTTCTCATCTTAGTCACAA  550

seq1  TTTGTTTCCTGAACAATGGAACTATGGTTAAATAGATAAAGACTATTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCCTGAACAATGGAACTATGGTTAAATAGATAAAGACTATTGCT  600

seq1  TAGTCTGCCTGCCTTCAGGGCAGTGTAGGGGTGCTGTGGTCATGTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCCTGCCTTCAGGGCAGTGTAGGGGTGCTGTGGTCATGTCCAGG  650

seq1  GAATAAAGGAGCCAGGACTAGAGAGTAGGACTGTCTCCTTACAAATGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAGGAGCCAGGACTAGAGAGTAGGACTGTCTCCTTACAAATGAGC  700

seq1  CTTGATGACAGACCATGACTCTCTCACGTCTTGGCTGATTACTGAGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGACAGACCATGACTCTCTCACGTCTTGGCTGATTACTGAGTTGG  750

seq1  CCTTTTCTGTTAATGTTTGCTTCCTGACATAGTCTCACATTGTAATCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTGTTAATGTTTGCTTCCTGACATAGTCTCACATTGTAATCAAG  800

seq1  GGTGGGTTCAAACTTCATGCAAACC-TTCCTGTAGCAGATTTCCAAGTGC  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGTGGGTTCAAACTTCATGCAAACCTTTCCTGTAGCAGATTTCCAAGTGC  850

seq1  TGGGAATATAACTTTTCTTTTCTTCTTTTTCTTAGCACATTTATACATGT  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGGAATATAACTTTTCTTTTCTTCTTTTTC-TAGCACATTTATACATGT  899

seq1  ATATGTTCATACCTTGTAATGTGTGTGGAGGGCACAACTTTTGGAAGTTC  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATATGTTCATACCTTGTAATGTGTGTGGAGGGCACAAC-TTTGGAAGTTC  948

seq1  TCCTGCCATGTGGGTCCTAGGGACCATAATACGGCTTGGCGGCAAGCTCC  999
      ||||||||||| ||||||||||| ||| ||||||||| |||||||||| |
seq2  TCCTGCCATGT-GGTCCTAGGGA-CAT-ATACGGCTT-GCGGCAAGCT-C  993

seq1  TTTACCTGCTTAGCCATCCTGTTAGCCCTTGTTTAGGATCTTGATTGTTA  1049
      |||| |||| |||| ||||||||||||| |||||| |||| ||| |||||
seq2  TTTA-CTGC-TAGCAATCCTGTTAGCCC-TGTTTA-GATC-TGA-TGTTA  1037

seq1  TGAACT-GAGGTAGCAA-TTTCCTGGATAATCTAAAAAAATGCTTTTATT  1097
      |||||| |||||||||| |||| ||||| ||||  |||||||| ||||||
seq2  TGAACTGGAGGTAGCAATTTTCTTGGAT-ATCT--AAAAATGC-TTTATT  1083

seq1  TTGA-TATGGTCTTGCTTCCCAGTCTGGATTTATTCACTATTTTTCATAT  1146
      |||| |||||  |||||||| || ||||||||| |||||||||||  |||
seq2  TTGATTATGG--TTGCTTCCAAGCCTGGATTTA-TCACTATTTTTTCTAT  1130

seq1  CTATTTATTGA  1157
      |||||||||||
seq2  CTATTTATTGA  1141


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