BAC Information

Click to search

BAC

Clone NameB6Ng01-143O12
Chromosome10 (Build37)
Map Location 104,053,915 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143O12.bB6Ng01-143O12.g
ACCDH941720DH941721
length1,214865
definitionDH941720|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O12, 5' end.DH941721|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagacaatttttcgtggagattgaaaaagaaaaactattttaa
actttgtgtggaatcataaaaacaaacaaacaaaaaacaggagatctaaa
gtaatcctaaataataaaagaactgctggaggcgtggggtattgccatca
cagacttcaagacttatgagagatctttagtaatataaacagcacagtat
tggcataaaaccagacatgctgctcaacagaatggaactgaagacacaaa
cacaattaaacacacctagggacacctgatattttgacaagaagccaaaa
ctacacattgaagaaaatgtagcatctacagtgaatggtgctggtcaaac
tgaatagctacatggagaagaataaaataaatccctgtctataatcttgc
acaaaactcagctccaattaggtgaaggaactcaacatgagactagatac
catgatttggatataagagaaagtaggaaatagacttgaacttattggcc
caagagaggactttctgaacacgacatccatagcacaggaactaagacca
acaagtcatgaatctgaaaagcttctgtacagcaaagaataatatcattc
aggcaatgtggtagcctagagaatgagaaaatataatctttaccaattat
gcattgaatagagggttaatacttagaatatacaaagaactttacaaaag
tgaagatcaaaatcaaattgacccaatcaataactgggtataaactaaat
gagagttctcaaaagataacacaaattgctatgaaacactgttttaaatg
tttatcatcctcatgacaggaaatgcaaacttaaactacgttgagatttc
atcttactccaataataatggtcaagatataaaacacaatgaaagcccat
tctggcaaaactcaaaagtagggaacacatatttatgctgtggaattgca
agctggtacagctactatgaaatcagtgtgtgagctctatctcagatcta
gctatacacagtatggtaggatagatgctcccatgggctcatagattgat
gggtgcacagggagtgcagtattagagtttgcctgttgagtaggtgtgga
ctgtggatgagtgtcaactggggggtgatcagtttcctatctcaacaggt
tcagtctctttctcgtgctgcaacgaaaccgaatcctctgtagcatccct
tctcatggatttag

gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacactagttagaatgtctaagatcaaaactcaggtgacagca
gatgctggcaagtatgtggagaaagaggagtactcgtccattgctggtgg
gactgcaagctggtacaatccctctggaaatcagtttggtggttcttcag
aaatttggacatagtagtactggaggatcccgcaatacctctcctgggca
tatatccagaagtttttccaaccggtaagaaggatatattcttcactctg
tacattggagccttatttataatagccagaatctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaattg
agtatattagaacaatgaacttatgaaattcttaggcaaatggatggatc
tggaagatatcatcctgagtgaggtaacccaatcacaaaagaacactcat
gatatacactcagtgatatttggatattagcccagaaacttagaataccc
aagatgcaatttgcaaaacacatgaaactcaagaagaaagaagatcaaag
tttggatacttcgttcctacttagaatgggagacagagtacctatggatg
tatttacagagacaacgttcagaacagagcctgaaagaatgaccatctag
agactgcccctcttggggatccatcccataaacaaccaccaaacccagac
actaggcagaaaccaacaacagcctgatcagtgtgggtttttacccaggg
ggattttgcttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053915_104054363
seq2: B6Ng01-143O12.g_67_514 (reverse)

seq1  ATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCA  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCA  50

seq1  TCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATA  100
      |||||||||||||||| | ||||||||||||||||||||| | ||| | |
seq2  TCTGGGTTCTTTCCAGATTCTGGCTATTATAAATAAGGCTCCAATGTACA  100

seq1  TAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATG  150
       |||| || || | |||||||||||||||||   | ||||||||||||||
seq2  GAGTGAAGAATATATCCTTCTTACCGGTTGGAAAAACTTCTGGATATATG  150

seq1  CCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCT  200
      ||||| ||||||||||| ||||||||| ||| |||||||||||| |||||
seq2  CCCAGGAGAGGTATTGCGGGATCCTCCAGTACTACTATGTCCAAATTTCT  200

seq1  GACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCC  250
      || ||||| ||| || ||||||||||| | |||||| ||| |||| ||||
seq2  GAAGAACCACCAAACTGATTTCCAGAGGGATTGTACCAGCTTGCAGTCCC  250

seq1  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTG  300
      |||| ||||||| ||||  |||||||||||||||| || |||||||||||
seq2  ACCAGCAATGGACGAGTACTCCTCTTTCTCCACATACTTGCCAGCATCTG  300

seq1  CTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAA  350
      |||||||||| | |||||||||||| |||||| ||| |||||||||||||
seq2  CTGTCACCTG-AGTTTTGATCTTAGACATTCTAACTAGTGTGAGGTGGAA  349

seq1  TCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAAC  400
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  TCTCAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGATGCTGAAC  399

seq1  ATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  449
      ||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  ATTTTTTCAGGTGCTTCTCAGCCATTTGGTATTCCTCAGGTGAGAATTC  448


| Home | SequenceCutter | Blast | Download |