BAC Information

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BAC

Clone NameB6Ng01-143O14
Chromosome10 (Build37)
Map Location 34,604,288 - 34,605,309
singlet/doubletsinglet
Overlap genenone
Upstream geneRshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk
Downstream geneLOC667824, LOC100041585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143O14.bB6Ng01-143O14.g
ACCDH941724DH941725
length1,0171,201
definitionDH941724|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O14, 5' end.DH941725|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatttctcccctttcagaaactacttggaatacaagaattggt
cttcaaaacctgagaaaaaagacacaaaggaggaaacaatatgcacactg
gcatgaggtcagagctctagttatctctaacttcaaaagttttaaacttc
agtcctacaaagcaaaaagttcctgggagaccaaaccttagcagtctgaa
agcatttcatcaccaaatctgtcacagctgtttctggagttcttttgcac
tttttttttttattctgtggggacttttaacatttaggaactttatggtt
attttttcccacatcttctcattggttcacatcttgttctgctactgttt
atgcctgtgtcctctgaaatttttcaaattctttgggcctaaaaattagg
agaaattaatggtgccaatgtccttatgcttactgtgaagaaagcacaca
cacacacacacacacacacttcttctcttgcacatctcttccaggaacta
ctgcctattccagctgagatgtcaatcaaaccctatctctcaaggactac
cttgtaagccttcagagaattggtagtgagaatcttctaactctacgaga
agtctgttcctgggctcatagctgctcacagctctggctgaactagggct
actttcagatgttctgtttctacattaacattgggttgtcttaagactga
acttcaagcatcatgcagttagtttatactcaaagaagttgatattatag
cacctaggtgtgcctgagctctcccactagaccacaagcatgtcttctcc
aagaactaatactaccctaggaatgttcactgagaaaagcaactaaggtg
gcacacaagactgaaataaaaatggacaattgccaaccaaagagtatgca
tggagggacccatggctccagctccatatgtagcagagatgcttatgtgg
cattagtgtgaagggaggcccttggtctgtgtaggtttgatgccccaggg
taaggaatggtaaggag
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaagaacaccacagaccagaatcttctgc
ggcaaagctttatttcttacatcttcaggagccagggtgcaggaagcaag
agagcaagaagcaagagagcgagaaaacgaaaccccgtccctcttaagga
gcattctccttcgcctcggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacagcatgt
cagcgccatcttgtaacggcgaatgtgggggcggctcccaacagttcccc
agctgaggagttctgaatccaggccggatccttctcaacagtctgtttta
cgggaacctttatgaccgtgacccgcagttctggttccggaatgagggat
cttccttgcgccggtgatggtaaccgtccagggttttctcatcccaggat
ttctcgtcctgggttttctcgtcccaggtttcggcaccaactcttacacg
cgttctctggtacaaccactctggaaatcagtctggcagttcctcagaaa
gttagacacattactacctgaggacatagtactactggagagtccagcaa
tacctctcctaggcatagacccaaatgatgttccaacttataatggagga
cacatgctccatatgttcatagtagccttatttataatagccaggagtct
acacgcgttctcgcgaccggccaggaaagacgcaacaaacggaatcttct
gcggcaaagctttattgcctacatctcagagtcagagagcagaaagccag
agctctattgcttacatctttagagctgagcgcaagagagccagaagtaa
gagtgccagaagccaggagagagatggcgacccgtccttaaggaaatacc
tctgccagagacgtgtccactccgattgtgcaaccacgtcgcgaggtgtg
tctgtctctcatcgagggagtgtcacgtagcctgacacactatgtgggat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34604288_34605309
seq2: B6Ng01-143O14.b_47_1063 (reverse)

seq1  CTCCCTACCATTCCCCTACCCTGGGGCATCAAACCTACACAGGACCAAGG  50
      |||| ||||||| || ||||||||||||||||||||||||| ||||||||
seq2  CTCCTTACCATT-CCTTACCCTGGGGCATCAAACCTACACA-GACCAAGG  48

seq1  GCCTCCCCTCACACTAATGCCACATAAGGCCATCCTCTGCTACATATGGG  100
      ||||||| ||||||||||||||||||||  ||| ||||||||||||||| 
seq2  GCCTCCCTTCACACTAATGCCACATAAG--CAT-CTCTGCTACATATGGA  95

seq1  GCTGGAGCCATGGGTCCCTCCATGCATACTCTTTGGTTGGCAATTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCCATGGGTCCCTCCATGCATACTCTTTGGTTGGCAATTGTCCA  145

seq1  TTTTTATTTCAGTCTTGTGTGCCACCTTAGTTGCTTTTCTCAGTGAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTCAGTCTTGTGTGCCACCTTAGTTGCTTTTCTCAGTGAACAT  195

seq1  TCCTAGGGTAGTATTAGTTCTTGGAGAAGACATGCTTGTGGTCTAGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGGTAGTATTAGTTCTTGGAGAAGACATGCTTGTGGTCTAGTGGG  245

seq1  AGAGCTCAGGCACACCTAGGTGCTATAATATCAACTTCTTTGAGTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCAGGCACACCTAGGTGCTATAATATCAACTTCTTTGAGTATAAA  295

seq1  CTAACTGCATGATGCTTGAAGTTCAGTCTTAAGACAACCCAATGTTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGCATGATGCTTGAAGTTCAGTCTTAAGACAACCCAATGTTAATG  345

seq1  TAGAAACAGAACATCTGAAAGTAGCCCTAGTTCAGCCAGAGCTGTGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGAACATCTGAAAGTAGCCCTAGTTCAGCCAGAGCTGTGAGCA  395

seq1  GCTATGAGCCCAGGAACAGACTTCTCGTAGAGTTAGAAGATTCTCACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAGCCCAGGAACAGACTTCTCGTAGAGTTAGAAGATTCTCACTAC  445

seq1  CAATTCTCTGAAGGCTTACAAGGTAGTCCTTGAGAGATAGGGTTTGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTCTGAAGGCTTACAAGGTAGTCCTTGAGAGATAGGGTTTGATTG  495

seq1  ACATCTCAGCTGGAATAGGCAGTAGTTCCTGGAAGAGATGTGCAAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCAGCTGGAATAGGCAGTAGTTCCTGGAAGAGATGTGCAAGAGAA  545

seq1  GAAGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTTCACAGTAAGCATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTTCACAGTAAGCATAAG  595

seq1  GACATTGGCACCATTAATTTCTCCTAATTTTTAGGCCCAAAGAATTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGGCACCATTAATTTCTCCTAATTTTTAGGCCCAAAGAATTTGAA  645

seq1  AAATTTCAGAGGACACAGGCATAAACAGTAGCAGAACAAGATGTGAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAGAGGACACAGGCATAAACAGTAGCAGAACAAGATGTGAACCA  695

seq1  ATGAGAAGATGTGGGAAAAAATAACCATAAAGTTCCTAAATGTTAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGATGTGGGAAAAAATAACCATAAAGTTCCTAAATGTTAAAAGT  745

seq1  CCCCACAGAATAAAAAAAAAAAGTGCAAAAGAACTCCAGAAACAGCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGAATAAAAAAAAAAAGTGCAAAAGAACTCCAGAAACAGCTGTG  795

seq1  ACAGATTTGGTGATGAAATGCTTTCAGACTGCTAAGGTTTGGTCTCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTGGTGATGAAATGCTTTCAGACTGCTAAGGTTTGGTCTCCCAG  845

seq1  GAACTTTTTGCTTTGTAGGACTGAAGTTTAAAACTTTTGAAGTTAGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTGCTTTGTAGGACTGAAGTTTAAAACTTTTGAAGTTAGAGAT  895

seq1  AACTAGAGCTCTGACCTCATGCCAGTGTGCATATTGTTTCCTCCTTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGCTCTGACCTCATGCCAGTGTGCATATTGTTTCCTCCTTTGTG  945

seq1  TCTTTTTTCTCAGGTTTTGAAGACCAATTCTTGTATTCCAAGTAGTTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTCTCAGGTTTTGAAGACCAATTCTTGTATTCCAAGTAGTTTCT  995

seq1  GAAAGGGGAGAAATAAGAATTC  1022
      ||||||||||||||||||||||
seq2  GAAAGGGGAGAAATAAGAATTC  1017