BAC Information

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BAC

Clone NameB6Ng01-143O15
Chromosome10 (Build37)
Map Location 109,564,324 - 109,565,480
singlet/doubletsinglet
Overlap genenone
Upstream geneNav3, LOC100042497
Downstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143O15.bB6Ng01-143O15.g
ACCDH941726DH941727
length1,2081,138
definitionDH941726|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O15, 5' end.DH941727|Mus musculus domesticus DNA, BAC clone: B6Ng01-143O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcaattctgagccccacctttttaatggggttattagat
tttctgaagtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatccgttggtggtc
tttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctgtggttttatgtgaagttccttt
ttccacttagatttgaccttagtacaaggagataagtatggatcgatttg
cattcttctacacgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtctggcatggtgattccgccagaagttctt
ttatccttgagaagactttttgctatcctaggttttttgttattccagac
aaatttgcaaattgctccttccaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatcttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcaat
acagaatctttcacttccttagttagagtcacgccagatattttatatta
ttttgtgactatgagaaggtgttgtttccctatttctttctcagctgtta
tcctgtatagagaaggccatgacttggttgagttatttttatatcagcta
ctttcaccgagctgttatcagttagaaggtctctgggtaagattaggtca
cttaatatacatccatatcaatcgccaaagggaattttgactcctgttgc
atggatcctggatatcccctgtggacgaatgcgtctggcagtaacatact
cacagaac
gaattctcccaaagaacaaagtttggttaacattcaggctgtctctgaat
atttttattaaattagttacagctccctgtattcccattaccaaaattta
acttccaaattaatatcttcagttatgagatgaatcattctttccaaaga
gagactaaaattttattaagagtattagaaaaatgtgtcacttagctgtc
ttttccagacccataagacctgtaattctgtatacaagtaaaatttgcaa
acagctgtattgtgttttcttcagttgggggttactgttagcttgtgtga
tttggttatgttcaataaaaaaggttttcatgaaattgaatggcttttca
cacaggtaaaactaatacttatcactctacttcttatccctaaattcttc
attctgactcctcgccgaatattctctggaagatatatctaagggttagt
tattaaatgcaggtacttttaaatcatactcaaaatttgactttaatgct
tttgaaaaattaaccttttatgtttatattcttaaccaatgctggtgcat
tgaatacccatagtatgtcctagatagagaatatttaaatgaagatacag
cagggaaccagcctaaaccctagcaagaaatacagttaagtgccaagcaa
gggatcatttcaccagaggaagtgcggcataataaaaacaagcatcaaaa
agcaggatttgaactgatttgttggttggcaaagatagaattactaaagg
gctttatgttgtgactgaacggctagagcatggtgtgtgtgaatttaaga
aaggagagaccaggatggaagtctttttaagaacatagggattactacac
agtctaagaaactcatgctgtgattctggtatgcatcaaattgtaacaca
ttttgcttatcactatttactcttctttttatactcatttgcatgtcaca
tttcagaagagaaacagacttggtaagagttttgtaataggaggtgattg
taagaaattgcatggatagtctcagcccacaagcagtctttaaagttcca
attcagtagtctccttagaatctctctttgcaggacttggtggggggtgc
tttaccccgaacttggacacatggcaggcagaatttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109564324_109565480
seq2: B6Ng01-143O15.g_67_1204 (reverse)

seq1  AGAAA-TCTGCCTGCCACTGTTTCCCAAGTACTGGGGTTAAAGGCACCCA  49
      ||||| ||||||||||| ||| | |||||| | |||||  || |||||| 
seq2  AGAAATTCTGCCTGCCA-TGTGT-CCAAGTTC-GGGGT--AAAGCACCCC  45

seq1  CCACCAGTGCCCTGCAAAAGAGGAATTTCTAAGGAGACTACTGGAATGGG  99
      ||||||  | ||||| ||||| ||  ||||||||||||||||| | ||| 
seq2  CCACCA-AGTCCTGC-AAAGA-GAGATTCTAAGGAGACTACTGAATTGGA  92

seq1  ACTTTTAAAAGACCTGCCTTGTGGGCTGGAGACTTATCCATGCAATTTCT  149
      |||||  ||||| ||| |||||||||| ||||| ||||||||||||||||
seq2  ACTTT--AAAGA-CTG-CTTGTGGGCT-GAGAC-TATCCATGCAATTTCT  136

seq1  TACAATCCACCTCCTAATACAGATCTCTTACCAGGTCTGTTTCTCTTCTT  199
      |||||| ||||||||| |||| | ||||||||| |||||||||||||| |
seq2  TACAAT-CACCTCCTATTACAAAACTCTTACCAAGTCTGTTTCTCTTC-T  184

seq1  GAAATGTGACATGCAAATGAGGTATATAAAGAAGAGTAAATAGTGGATAA  249
      |||||||||||||||||||| ||||| ||||||||||||||||| |||||
seq2  GAAATGTGACATGCAAATGA-GTATAAAAAGAAGAGTAAATAGT-GATAA  232

seq1  GGCAAAATGTGTTACATTTTGATGCATACCAGATTCACAGCATGAGTTTC  299
       ||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  -GCAAAATGTGTTACAATTTGATGCATACCAGAATCACAGCATGAGTTTC  281

seq1  TTTAGACTGTGTAGTAATCCCTATGTTCTT-AAAAGACTTCCATCCTGGT  348
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  -TTAGACTGTGTAGTAATCCCTATGTTCTTAAAAAGACTTCCATCCTGGT  330

seq1  CTCTCCTTTCCTTAAATTCACACACACCATGCTCTAGCCGTTCAGTCACA  398
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTT-CTTAAATTCACACACACCATGCTCTAGCCGTTCAGTCACA  379

seq1  ACATAAAGCCCTTTAGTAATTCTATCTTTGCCAACCAACAAATCAGTTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGCCCTTTAGTAATTCTATCTTTGCCAACCAACAAATCAGTTCA  429

seq1  AATCCTGCTTTTTGATGCTTGTTTTTATTATGCCGCACTTCCTCTGGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCTTTTTGATGCTTGTTTTTATTATGCCGCACTTCCTCTGGTGA  479

seq1  AATGATCCCTTGCTTGGCACTTAACTGTATTTCTTGCTAGGGTTTAGGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCCTTGCTTGGCACTTAACTGTATTTCTTGCTAGGGTTTAGGCT  529

seq1  GGTTCCCTGCTGTATCTTCATTTAAATATTCTCTATCTAGGACATACTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCTGCTGTATCTTCATTTAAATATTCTCTATCTAGGACATACTAT  579

seq1  GGGTATTCAATGCACCAGCATTGGTTAAGAATATAAACATAAAAGGTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTCAATGCACCAGCATTGGTTAAGAATATAAACATAAAAGGTTAA  629

seq1  TTTTTCAAAAGCATTAAAGTCAAATTTTGAGTATGATTTAAAAGTACCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAAGCATTAAAGTCAAATTTTGAGTATGATTTAAAAGTACCTG  679

seq1  CATTTAATAACTAACCCTTAGATATATCTTCCAGAGAATATTCGGCGAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATAACTAACCCTTAGATATATCTTCCAGAGAATATTCGGCGAGG  729

seq1  AGTCAGAATGAAGAATTTAGGGATAAGAAGTAGAGTGATAAGTATTAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAATGAAGAATTTAGGGATAAGAAGTAGAGTGATAAGTATTAGTT  779

seq1  TTACCTGTGTGAAAAGCCATTCAATTTCATGAAAACCTTTTTTATTGAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGTGTGAAAAGCCATTCAATTTCATGAAAACCTTTTTTATTGAAC  829

seq1  ATAACCAAATCACACAAGCTAACAGTAACCCCCAACTGAAGAAAACACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAATCACACAAGCTAACAGTAACCCCCAACTGAAGAAAACACAA  879

seq1  TACAGCTGTTTGCAAATTTTACTTGTATACAGAATTACAGGTCTTATGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGTTTGCAAATTTTACTTGTATACAGAATTACAGGTCTTATGGG  929

seq1  TCTGGAAAAGACAGCTAAGTGACACATTTTTCTAATACTCTTAATAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAAGACAGCTAAGTGACACATTTTTCTAATACTCTTAATAAAAT  979

seq1  TTTAGTCTCTCTTTGGAAAGAATGATTCATCTCATAACTGAAGATATTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTCTCTTTGGAAAGAATGATTCATCTCATAACTGAAGATATTAA  1029

seq1  TTTGGAAGTTAAATTTTGGTAATGGGAATACAGGGAGCTGTAACTAATTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGTTAAATTTTGGTAATGGGAATACAGGGAGCTGTAACTAATTT  1079

seq1  AATAAAAATATTCAGAGACAGCCTGAATGTTAACCAAACTTTGTTCTTTG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATATTCAGAGACAGCCTGAATGTTAACCAAACTTTGTTCTTTG  1129

seq1  GGAGAATTC  1157
      |||||||||
seq2  GGAGAATTC  1138