BAC Information

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BAC

Clone NameB6Ng01-144B10
Chromosome10 (Build37)
Map Location 113,200,788 - 113,201,851
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042639, 4921506J03Rik, LOC100042655, LOC100042666
Downstream geneTrhde, 4930473D10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144B10.bB6Ng01-144B10.g
ACCDH941856DH941857
length1,1651,049
definitionDH941856|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B10, 5' end.DH941857|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatatggaatgtctgagaagcacttgaaaaaatg
atcagcattcttaatcatcagggatgtgcaaatcaaagcaacccagagat
tccacctctctccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgatgagattgtggagaaagaggaacactcctccattgttggtg
ggatttcaagcttgtacaaccactctggaaatcagtctggctcttcctca
gaaaattggacatagtactaccgtaggaccccgcaatacctctcctgggc
atatatccagaagatgttccaactgctaagaagaacacatgctccactat
gttcatagcagccttatttatagtagccagaaactggaaagtacccagat
gtccctcaacataggagtagatacagaaaatgtggtacatttacataatg
gtgtactactcagctattaaaaagaatgaatttatgaaattcctaggaaa
atggatggacctatagggcatcatcctgagtgaggtaacacaatcacaaa
agaactctcatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatacaagataaaatttgcaaaatacatgaaattcaa
gaagaacaaataccaaagtgtggacaccttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagacg
aaaggatggaccatctagagactgccatatccggggatccatcccatatt
cagcctccaaacgctgacaccattgaatacactaacaaggttttgctgaa
aggtcccagatatagctgtctcttgtgaggctatgccagggcctagcaaa
aacagaaatggatgctcacaatcagctattggatggatcaccgggcccca
gtggaggagctagagaaatacccatgagctaaaggggtctgcacactata
ggtggacacattatgaactaccagtaaacccagagcttgtgtctctaggt
gcatatatatcagaagatggctagtcagcatcatgaagagaggccattgt
ctacaactttatatgcctcagtcaaggatgcagccagaaatggggatggg
tatgtaaggagagta
gaattcctttgtctgggcatgttttacattattggtcttttgtgtgtata
cttgggtttccagttttctcttctgggagtttctgtgttagctatttata
ttttaatttttctgtttgctttctggagaaagggaaagaaggtgtttagt
ttgatggttggggaggaacagaagatccaggagatgagcaagaggaaacc
atcaccggaacacagtgtacgaaaattttcattttcaaaataaataaaat
aaactgaatctaatcttctatagcacaggctagccgtattttgtatgttg
tagcaataacttgaagccaatgatactcagaaactcaaagcgtgagaaat
taggacatttggacattctataatatcttaaggaaagactgtccacttga
tatttaactttggtgaattttaaacaagtcattcatattgtcactcattt
acttaaaaatgagactagcaacatcattccaggttttctgaagagaagta
agggtagagagctctaggaagaccattctcatacgtatgcagatgtccca
ggagagagctgggcacatctttctacctggctctgatttgattaaaaaga
gaaggtgatctttgaatagtatgaaaaaaagtagagttaaatcacatagg
ttgaatatgaacatggagggaagatgtgtttctcaaactgagagttttac
tttgttttttttttttgttgttgttgttttttttttttttaagccaatgg
tagagaagtaggtggtcaggataaatccgggctgacagatggacagctgt
gggaggtgagttttaattaggactcgcactgattgcaatttgctccctgt
taatgatttgttccaggggttacagtctctaaaacacagaaaattcctaa
ctcttcacaagactcaaacccgaaatcacaggaaaccagtgggtatgcct
tagatcttcattaagactctctttatactagttttcactgcttctatgta
gatatatgcacccaatttctggtccaagttggtcgccctcttttctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_113200788_113201851
seq2: B6Ng01-144B10.g_67_1115

seq1  GAATTCCTTTGTCTGGGCATGTTTTACATTATTGGTCTTTTGTGTGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTCTGGGCATGTTTTACATTATTGGTCTTTTGTGTGTATA  50

seq1  CTTGGGTTTCCAGTTTTCTCTTCTGGGAGTTTCTGTGTTAGCTATTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTTCCAGTTTTCTCTTCTGGGAGTTTCTGTGTTAGCTATTTATA  100

seq1  TTTTAATTTTTCTGTTTGCTTTCTGGAGAAAGGGAAAGAAGGTGTTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTTTCTGTTTGCTTTCTGGAGAAAGGGAAAGAAGGTGTTTAGT  150

seq1  TTGATGGTTGGGGAGGAACAGAAGATCCAGGAGATGAGCAAGAGGAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTTGGGGAGGAACAGAAGATCCAGGAGATGAGCAAGAGGAAACC  200

seq1  ATCACCGGAACACAGTGTACGAAAATTTTCATTTTCAAAATAAATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCGGAACACAGTGTACGAAAATTTTCATTTTCAAAATAAATAAAAT  250

seq1  AAACTGAATCTAATCTTCTATAGCACAGGCTAGCCGTATTTTGTATGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAATCTAATCTTCTATAGCACAGGCTAGCCGTATTTTGTATGTTG  300

seq1  TAGCAATAACTTGAAGCCAATGATACTCAGAAACTCAAAGCGTGAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATAACTTGAAGCCAATGATACTCAGAAACTCAAAGCGTGAGAAAT  350

seq1  TAGGACATTTGGACATTCTATAATATCTTAAGGAAAGACTGTCCACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACATTTGGACATTCTATAATATCTTAAGGAAAGACTGTCCACTTGA  400

seq1  TATTTAACTTTGGTGAATTTTAAACAAGTCATTCATATTGTCACTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAACTTTGGTGAATTTTAAACAAGTCATTCATATTGTCACTCATTT  450

seq1  ACTTAAAAATGAGACTAGCAACATCATTCCAGGTTTTCTGAAGAGAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAATGAGACTAGCAACATCATTCCAGGTTTTCTGAAGAGAAGTA  500

seq1  AGGGTAGAGAGCTCTAGGAAGACCATTCTCATACGTATGCAGATGTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGAGAGCTCTAGGAAGACCATTCTCATACGTATGCAGATGTCCCA  550

seq1  GGAGAGAGCTGGGCACATCTTTCTACCTGGCTCTGATTTGATTAAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGCTGGGCACATCTTTCTACCTGGCTCTGATTTGATTAAAAAGA  600

seq1  GAAGGTGATCTTTGAATAGTATGAAAAAAAGTAGAGTTAAATCACATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGATCTTTGAATAGTATGAAAAAAAGTAGAGTTAAATCACATAGG  650

seq1  TTGAATATGAACATGGAGGGAAGATGTGTTTCTCAAACTGAGAGTTTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATGAACATGGAGGGAAGATGTGTTTCTCAAACTGAGAGTTTTAC  700

seq1  TTTGTTTTTTTTTTTTGTTGTTGTTGTTTTTTTTTTTTTTAAGCCAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTTTTTTTGTTGTTGTTGTTTTTTTTTTTTTTAAGCCAATGG  750

seq1  TAGAGAAGTAGGTGGTCAGGATAAATCCGGGCTGACAGATGGACAGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGTAGGTGGTCAGGATAAATCCGGGCTGACAGATGGACAGCTGT  800

seq1  GGGAGGTGAGTTTTAATTAGGACTCAGCACTGATTTGCAATTTGCTCCCT  850
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  GGGAGGTGAGTTTTAATTAGGACTC-GCACTGA-TTGCAATTTGCTCCCT  848

seq1  GTTAATGATTTGTTCCAGGGGTTACAGTCTCTAAAACACAGAAAATTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGATTTGTTCCAGGGGTTACAGTCTCTAAAACACAGAAAATTCCT  898

seq1  AACTCTTTCACAAGACTCAAACCCGCAAATCTACAGGAAACCAGTGGGTA  950
      ||||| ||||||||||||||||||| ||||| ||||||||||||||||||
seq2  AACTC-TTCACAAGACTCAAACCCG-AAATC-ACAGGAAACCAGTGGGTA  945

seq1  TGCCTTCAGATCTTCAGTTAAGGACTCTCCTTAGTACCTAGTTTTCACTG  1000
      |||||| ||||||||| |||| ||||||| ||| || |||||||||||||
seq2  TGCCTT-AGATCTTCA-TTAA-GACTCTCTTTA-TA-CTAGTTTTCACTG  990

seq1  ACTTCCTATGTAGGATATACTGCACCCAATTTCTGTTCCACAGTTGTGCA  1050
       ||| ||||||| |||||| ||||||||||||||| |||| |||||  | 
seq2  -CTT-CTATGTA-GATATA-TGCACCCAATTTCTGGTCCA-AGTTGGTCG  1035

seq1  CACTCTTTTCTCAG  1064
      | ||||||||| ||
seq2  CCCTCTTTTCTAAG  1049