BAC Information

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BAC

Clone NameB6Ng01-144D15
Chromosome10 (Build37)
Map Location 104,686,695 - 104,756,301
singlet/doubletdoublet
Overlap geneTmtc2
Upstream geneLOC100042383
Downstream geneEG627573, BC067068, Ccdc59, EG667758, EG639162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144D15.bB6Ng01-144D15.g
ACCDH941960DH941961
length3061,148
definitionDH941960|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D15, 5' end.DH941961|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,686,695 - 104,687,000)(104,755,145 - 104,756,301)
sequence
aaagttcatttctgctacttagagacaacaagtagcagaattcaaacagc
atgtagctacaagaaaaagaagaaacctcaaaaaaactgctgaacctata
atttgaaaaaaccatgaaaccttatcctgatttttgtcttctctcatcat
ttaatggagaaacatcatcacagccttgaaaccttgtcttaaggattgat
taaagttgtctctttcagatagcaatagctctgggtctttaatctcttga
tatacacataacccatgcataaatcttccacatactttatatgagcccta
tatcag
gaattcacctcctaatcaaatgggttaaatcccccgagtgtttgctttaa
ctcctaatacattttgattagcctccatttgacaagggaaaaaaatggcc
taggagataagctgccctatcagttcatcagcttcattagtctgtcagca
tgtgctgattatcctatcaagtttatcaacagccttcactgtgttttcta
attcacacatttacatattattagtgccctttagggatcagtgatggatt
ataatgtctggctatattcagcctgcaagtgttcatttttttacatgtct
cattcatttacccctctgggccaccctcctcccgtgagcacttgtataca
caggcatatttgtgatttgtgtgtgtgtgtgtgttctaatttttctttga
atatagtagatctaatgaaatgtatgtaaaaatacaactatattagaatt
ttgttttaataaattcactgaggttgctttaaaaaatttttgagctagtc
ccttagattttcttttccttcctttgagcattttagaactttccactatg
tgccttttcactggctttcaataccagatgaacatatttcttacttttat
tataatttaaagctgggctgactaatgtgctcctcaacgttaatgtgttt
ttcatattttactcaattttttactattctttactcgatcttacaatgat
cattcataagtaagcacacagttcatctaaaatatattctccttgttcat
tttggctccacaggacccagggtatggttttaactaacaggggactaagt
tccccaaagaattaggtgaggtgcaaatatttagaggtacaccaaactga
tactaaatatcattttgcaaacaaattttaaaaataaaggataagtgggt
gtgaagagttgcttccagacagttacgtgattttatttttgtgggactca
gttgcctcttgaagacagtgagttgtgttcaattgcagttcagtatagtg
tcgggcagtctctgaaatcagaaggcctggcttcaggtgattttgacagg
tttctagggtcagtatgcctggttgattttgtgtcctaactagcttgatc
taaggcagccattggaagtgataactatgatataaaaatatgggcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104686695_104687000
seq2: B6Ng01-144D15.b_54_359

seq1  AAAGTTCATTTCTGCTACTTAGAGACTTCAAGTAGCAGAATTCAAACAGC  50
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AAAGTTCATTTCTGCTACTTAGAGACAACAAGTAGCAGAATTCAAACAGC  50

seq1  ATGTAGCTACAAGAAAAAGAAGATACCTCAAAAAAACTGCTGAACCTATA  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGTAGCTACAAGAAAAAGAAGAAACCTCAAAAAAACTGCTGAACCTATA  100

seq1  ATTTGAAAAAACCATGAAACCTTATCCTGATTTTTGTCTTCTCAAAACAT  150
      |||||||||||||||||||||||||||||||||||||||||||  | |||
seq2  ATTTGAAAAAACCATGAAACCTTATCCTGATTTTTGTCTTCTCTCATCAT  150

seq1  TTAATGGAGAAACATCATCACAGCCTTGAAACCTTGTCTTAAGGATTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGAGAAACATCATCACAGCCTTGAAACCTTGTCTTAAGGATTGAT  200

seq1  TAAAGTTGTCTCTTTCAGATAGCAATAGCTCTGGGTCTTTAATCTCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGTCTCTTTCAGATAGCAATAGCTCTGGGTCTTTAATCTCTTGA  250

seq1  TATACACAGAACCCATGCAGAAATCTTCCACATACTTTAAATGAGCCCTA  300
      |||||||| |||||||||| ||||||||||||||||||| ||||||||||
seq2  TATACACATAACCCATGCATAAATCTTCCACATACTTTATATGAGCCCTA  300

seq1  TATCAG  306
      ||||||
seq2  TATCAG  306

seq1: chr10_104755145_104756301
seq2: B6Ng01-144D15.g_66_1213 (reverse)

seq1  CAGGCCAATATTTTTATATCATTATTTTAATCAACTTTCAAATGGCTG-C  49
      |||||| |||||||||||||||  ||   ||||   ||| |||||||| |
seq2  CAGGCCCATATTTTTATATCATAGTT---ATCA--CTTCCAATGGCTGCC  45

seq1  TATGATCACAGCTAGTTTAGGAACACAAAATCAACCAGGCATACTGACCC  99
      |  ||||| |||||| ||||| ||||||||||||||||||||||||||||
seq2  TTAGATCA-AGCTAG-TTAGG-ACACAAAATCAACCAGGCATACTGACCC  92

seq1  TAGAAA-CTGTCAAAAATCACCTGAAGCCAGGCTTTCTGATTTCAGAGAC  148
      |||||| ||||| |||||||||||||||||||| ||||||||||||||||
seq2  TAGAAACCTGTC-AAAATCACCTGAAGCCAGGCCTTCTGATTTCAGAGAC  141

seq1  TGCCCGACACTATACTTGAACTGCAATTGAACACAACTCACTGTCTTCAA  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCCCGACACTATAC-TGAACTGCAATTGAACACAACTCACTGTCTTCAA  190

seq1  GAGGCAACTGAGTCCCACAAAAGTAAAATCACGTAACTGTCTGGAAGCAA  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGGCAACTGAGTCCCACAAAAATAAAATCACGTAACTGTCTGGAAGCAA  240

seq1  CTCTTCACACCCACTTATCCTTTATTTTTAAAATTTTGTTTGCAAAATGA  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCTTCACACCCACTTATCCTTTATTTTTAAAA-TTTGTTTGCAAAATGA  289

seq1  TATTTAGTATCAGTTTGGTGTACCTCTAAATATTTGCACCTCACCTAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTATCAGTTTGGTGTACCTCTAAATATTTGCACCTCACCTAATT  339

seq1  CTTTGGGGAACTTAGTCCCCTGTTAGTTAAAACCATACCCTGGGTCCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGAACTTAGTCCCCTGTTAGTTAAAACCATACCCTGGGTCCTGT  389

seq1  GGAGCCAAAATGAACAAGGAGAATATATTTTAGATGAACTGTGTGCTTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAAAATGAACAAGGAGAATATATTTTAGATGAACTGTGTGCTTAC  439

seq1  TTATGAATGATCATTGTAAGATCGAGTAAAGAATAGTAAAAAATTGAGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATGATCATTGTAAGATCGAGTAAAGAATAGTAAAAAATTGAGTA  489

seq1  AAATATGAAAAACACATTAACGTTGAGGAGCACATTAGTCAGCCCAGCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAAAAACACATTAACGTTGAGGAGCACATTAGTCAGCCCAGCTT  539

seq1  TAAATTATAATAAAAGTAAGAAATATGTTCATCTGGTATTGAAAGCCAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATAATAAAAGTAAGAAATATGTTCATCTGGTATTGAAAGCCAGT  589

seq1  GAAAAGGCACATAGTGGAAAGTTCTAAAATGCTCAAAGGAAGGAAAAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCACATAGTGGAAAGTTCTAAAATGCTCAAAGGAAGGAAAAGAA  639

seq1  AATCTAAGGGACTAGCTCAAAAATTTTTTAAAGCAACCTCAGTGAATTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGGGACTAGCTCAAAAATTTTTTAAAGCAACCTCAGTGAATTTA  689

seq1  TTAAAACAAAATTCTAATATAGTTGTATTTTTACATACATTTCATTAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAAAATTCTAATATAGTTGTATTTTTACATACATTTCATTAGAT  739

seq1  CTACTATATTCAAAGAAAAATTAGAACACACACACACACACAAATCACAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATATTCAAAGAAAAATTAGAACACACACACACACACAAATCACAA  789

seq1  ATATGCCTGTGTATACAAGTGCTCACGGGAGGAGGGTGGCCCAGAGGGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCTGTGTATACAAGTGCTCACGGGAGGAGGGTGGCCCAGAGGGGT  839

seq1  AAATGAATGAGACATGTAAAAAAATGAACACTTGCAGGCTGAATATAGCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGAGACATGTAAAAAAATGAACACTTGCAGGCTGAATATAGCC  889

seq1  AGACATTATAATCCATCACTGATCCCTAAAGGGCACTAATAATATGTAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTATAATCCATCACTGATCCCTAAAGGGCACTAATAATATGTAAA  939

seq1  TGTGTGAATTAGAAAACACAGTGAAGGCTGTTGATAAACTTGATAGGATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATTAGAAAACACAGTGAAGGCTGTTGATAAACTTGATAGGATA  989

seq1  ATCAGCACATGCTGACAGACTAATGAAGCTGATGAACTGATAGGGCAGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCACATGCTGACAGACTAATGAAGCTGATGAACTGATAGGGCAGCT  1039

seq1  TATCTCCTAGGCCATTTTTTTCCCTTGTCAAATGGAGGCTAATCAAAATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTAGGCCATTTTTTTCCCTTGTCAAATGGAGGCTAATCAAAATG  1089

seq1  TATTAGGAGTTAAAGCAAACACTCGGGGGATTTAACCCATTTGATTAGGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGAGTTAAAGCAAACACTCGGGGGATTTAACCCATTTGATTAGGA  1139

seq1  GGTGAATTC  1157
      |||||||||
seq2  GGTGAATTC  1148