BAC Information

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BAC

Clone NameB6Ng01-144K14
Chromosome10 (Build37)
Map Location 105,866,510 - 105,867,513
singlet/doubletsinglet
Overlap genenone
Upstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758, EG639162
Downstream genePpfia2, Olfr1556-ps1, 8430416H19Rik, Lin7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144K14.b
ACCDH942280
length989
definitionDH942280|Mus musculus domesticus DNA, BAC clone: B6Ng01-144K14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccctactgatctgcctctgatatttttttctgcttatcatttg
cgagatactggacacttgagacgatatggaagagatctcatttcaggcat
tcctcacctccctgtctgacattcttccaccgtgtcattcacatagatcc
ctaactcttgaggcatgatgaaaatatctggggtgcaactatgccattgg
aaagaagtctcactaactttcaaactaaaaagagaaacgaaagttgcttt
tcaaactagctcacttccaagtggtcttattcaacaaccgtggaaattat
cataaattgttgttcttcctataaaatcatgttcattggtataaaagaga
tctgggatgataaatgaaaggttattatttttcttccactgttgtattta
tctgagaactttaataacatcctggaatttggaaaatgactattttacat
ttccatagatgagcactcaacttccacttggaagttctgaccgaattatc
acatcatttcatacaacttgaaatccattactgccacgatcagcctcctt
aatgtggtctcatttatttagttcactttaatatgaaattcatttcacac
tactggaaacttgcctttgtaaatcattattgtattcttttcaaaataag
tgcaggctatccttctgctagaactgtgaggtctaattcactccccttgc
ttcagtcatgagcatatgaattttgcactcagaacttgtctgggtgtttg
aacctctcgtctgtgatgttctaagctttcccatatttcctattgtcgtc
cttgtgatcactgtgttacattgctgttctgaccgaaattgacaccagca
cacattatgaatgagtttgctcttgagctcagccctctctccccatattt
gtcgactgacccctccttctttcccactaaccccctttcgctattatatt
agtctacccatttatcttgagtaatcagatatagtgtgc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105866510_105867513
seq2: B6Ng01-144K14.b_42_1030 (reverse)

seq1  GCACACTTGTAGTGATTACTCAAAATAAATGGGGAGATTAATAATAATTA  50
      |||||||     ||||||||||| ||||||||| ||| |||| |||| ||
seq2  GCACACTATATCTGATTACTCAAGATAAATGGGTAGACTAAT-ATAA-TA  48

seq1  GAG-AAGGGGGTTAGAGGGAAAGAAGGAGGGGTCACTAGAAAAAAATGGG  99
      | | ||||||||||| ||||||||||||||||||| | || ||| |||||
seq2  GCGAAAGGGGGTTAGTGGGAAAGAAGGAGGGGTCAGTCGACAAATATGGG  98

seq1  GAGAGAGGGCTGAGTGTCAAGAGCAAAACTCATTCCTAATGTGTGCTTGT  149
      ||||||||||||||  |||||||| |||||||||| ||||||||||| ||
seq2  GAGAGAGGGCTGAG-CTCAAGAGC-AAACTCATTCATAATGTGTGCTGGT  146

seq1  TTCAATTTTCTGATCAGAACAGCAAAAGTAAAACAAAGATCACAAGGACA  199
       |||||||   | |||||||||| || |||| |||  |||||||||||| 
seq2  GTCAATTT--CGGTCAGAACAGC-AATGTAACACAGTGATCACAAGGACG  193

seq1  ACAAAAGGAAACTCTGGGAAAGCTTAGAACATCACAGACGAGAGGTTCTG  249
      |||| |||||| | ||||||||||||||||||||||||||||||||||  
seq2  ACAATAGGAAA-TATGGGAAAGCTTAGAACATCACAGACGAGAGGTTCAA  242

seq1  AAGCCCAGACAATTTCTCTGTGCAAAATTCATCTGCTCATGTGTGAAGCA  299
      |  ||||||||| ||||  ||||||||||||| ||||||||  |||||||
seq2  ACACCCAGACAAGTTCTGAGTGCAAAATTCATATGCTCATGACTGAAGCA  292

seq1  AGGGGAGTGAATTAGAACTAGCAGAAATAACAGAAGGATAACCTGCACTT  349
      |||||||||||||||| ||  |||   || |||||||||| |||||||||
seq2  AGGGGAGTGAATTAGACCTCACAGTTCTAGCAGAAGGATAGCCTGCACTT  342

seq1  ATTTTTTAAAAGAATACAATAATGATTTACAAAGGCAAGTTTCCAGTAGT  399
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTGAAAAGAATACAATAATGATTTACAAAGGCAAGTTTCCAGTAGT  391

seq1  TTGAAATGAATTTCATTATAAAGTGAATTAAATAAATGAGAAAATATTAA  449
       |||||||||||||||  ||||||||| |||||||||||||  | |||||
seq2  GTGAAATGAATTTCATATTAAAGTGAACTAAATAAATGAGACCACATTAA  441

seq1  GGAGGCTGATCGTGGCAGTAATGGATTTTAAGTTTTATGAAATGATGTGA  499
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  GGAGGCTGATCGTGGCAGTAATGGATTTCAAGTTGTATGAAATGATGTGA  491

seq1  TAATTAGGTCAGAACTTTCAAGTGGAAGTAGAGTGATCATCTATGGAAAT  549
      ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||
seq2  TAATTCGGTCAGAACTTCCAAGTGGAAGTTGAGTGCTCATCTATGGAAAT  541

seq1  GTAAAATAGTCATTGAAACAAATTCCAGGATGTTATTAAAGTTCTCAGAT  599
      ||||||||||||||    ||||||||||||||||||||||||||||||||
seq2  GTAAAATAGTCATT-TTCCAAATTCCAGGATGTTATTAAAGTTCTCAGAT  590

seq1  AAATACAACAGTGGAAGAAAAATAATAACCTTTCATTTATCATCCCAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAACAGTGGAAGAAAAATAATAACCTTTCATTTATCATCCCAGAT  640

seq1  CTCTTTTATATGCAATGAACATGATTTTATAGGAAGAAAAACAATTTATG  699
      ||||||||||  |||||||||||||||||||||||||| |||||||||||
seq2  CTCTTTTATA-CCAATGAACATGATTTTATAGGAAGAACAACAATTTATG  689

seq1  ATAATTTTTATGGTTGCTGAATAAGAACACTTGGATGTGAGCTAGTTTGA  749
      |||||||  | ||||| ||||||||| |||||||| ||||||||||||||
seq2  ATAATTTCCACGGTTGTTGAATAAGACCACTTGGAAGTGAGCTAGTTTGA  739

seq1  AAAGCAACTTTCGTTTCTCTTTTTAGTTTGAAAGTTAGTGAGACTTCTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACTTTCGTTTCTCTTTTTAGTTTGAAAGTTAGTGAGACTTCTTT  789

seq1  CCAATGGCATAGTTCTTAATGAGATATCTTCATCATGCCTCAAGAGTTAG  849
      ||||||||||||||       |||||| ||||||||||||||||||||||
seq2  CCAATGGCATAGTTGCACCCCAGATATTTTCATCATGCCTCAAGAGTTAG  839

seq1  GGATCTATGTGAATGACACGGTGGAAGAATGTTAAGAGCTGGAGGTGAGG  899
      ||||||||||||||||||||||||||||||| | |||   ||||||||||
seq2  GGATCTATGTGAATGACACGGTGGAAGAATG-TCAGACAGGGAGGTGAGG  888

seq1  AATGACTCTAATGAGATCTCTTCATTATCGTCTCAAGTGTCCAGTATCTG  949
      |||| ||  ||||||||||||||  |||||||||||||||||||||||| 
seq2  AATGCCTGAAATGAGATCTCTTCCATATCGTCTCAAGTGTCCAGTATCT-  937

seq1  TGCAAATGATAAGCAGAAAAAAATCTAAGAGGCCTGATCATTTTTGGGAG  999
       ||||||||||||||||||||||| | ||||| | |||||   | |||||
seq2  CGCAAATGATAAGCAGAAAAAAATATCAGAGG-CAGATCA--GTAGGGAG  984

seq1  AATTC  1004
      |||||
seq2  AATTC  989