BAC Information

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BAC

Clone NameB6Ng01-145K05
Chromosome10 (Build37)18 (Build37)
Map Location 104,053,903 - 104,054,36341,370,613 - 41,370,731
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145K05.bB6Ng01-145K05.g
ACCDH942987DH942988
length1,014970
definitionDH942987|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K05, 5' end.DH942988|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(41,370,613 - 41,370,731)
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgtgaatcaaaacaaccttgatat
tccatctcacaccagtcagaatgactaagataaaaaaattcaggtgacag
cagatgctggtgaggaagtggagaaagaggaacactcctccattgttggt
ggaattgtaagctgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggt
gtatatccagaagatgttccaactggtaagaaagacacacgcttcactat
gttcatagcagccttatttataatagacagaagttggaaagaacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacataatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggaatgcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgtgaaacacatggatctcaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaatacccatggaaggagttacagagacaaagtttggagctgagtca
aaaggatggaccatctagagactgccatgtccagggatccatctcataat
ctgccttcaacgctgacaccattgcatacactagcaagattttgctgaaa
ggaccctgatatagctgtctcctgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctattggatgatcacaggccccaatg
gaagagctagtgaagtgaagatcctggtagattgtaaaggtcatagaagc
cctgaaatggtaaa
gaattctttgtctcaattaatcaggaagcaattataagaacatcattcaa
atcccttaagttgaggtggatggctttggtcatttatgaataatagaaat
attgttattttaggcaacgttttacaaataattatggtctcagtcaggga
ggaaatgagatagagggtttagactcagggattcctatctttcatttcct
cttcactatctttttatttcttaggtaaaggttagggattgaagagaaaa
agagaggatatgaaaatattatgagacataagacaaataaaatcagatta
ttgaatctactcttaaacaaaaaaatattttatagccataatcttacagt
ggtaaagatctttgtattttgatgcaaaatgaggttatactttgttacac
tggtaaagatttttcttgtacattaatacaaaaataagttttttgataca
ttggtataggttattttatactaatacaaatttaaaattatttttataca
tataatgtatatgtatttttaatgtttacttatggagctgtacttataca
tttcttaaagatataaagttctcattcatttgaaaactactattatgaat
tattaaggatgataaaaattcaagttagtatccacactttggtcttcttt
cttctcgagtttcatgtgttttgcaaattgtatcttgggtattctaagtt
tctaggctaatattcacttatcagtgagtgcatatcaggtgtgtattttg
tgattgggttaactcactcaggatgatatcctccagatgcatccatttgc
ctaagaatttcatgaattcattgttttaattgctaagtagtactccattg
tgtaaatgaaccacatttttttgaatccattcaccagtaccccccagagc
tgtgtctctagttgcatatgtagcagaggatggcctagtctgccatcatg
ggagagagcccttggtcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-145K05.b_45_515 (reverse)

seq1  TTTAATAGC----------TCCATTGTGTAAATGTACCACATTTTCTGTA  40
      |||||||||          |||||| |||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTATTCCATTATGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||| |||||||||| || ||| |||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGTGTTCTTTCCAACTTCTGTCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||| ||| |||||| |||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGAAGCGTGTGTCTTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||||||||  ||||| ||||||||||| ||||||||| 
seq2  TGGAACATCTTCTGGATATACACCCAGGAGAGGTATTGCAGGATCCTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| ||||| |||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCTCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||| ||| | |||| ||||||||||||||||||||||||||||||
seq2  GGTTGTAC-AGCTTACAATTCCACCAACAATGGAGGAGTGTTCCTCTTTC  299

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAA-TTTTTGATCTTAGCC  339
      ||||| ||||| |||||||||||||||||||||| ||||| ||||||| |
seq2  TCCACTTCCTCACCAGCATCTGCTGTCACCTGAATTTTTTTATCTTAGTC  349

seq1  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  389
      ||||||||||||||||| |||||| ||| |||||||||||||  ||||||
seq2  ATTCTGACTGGTGTGAGATGGAATATCAAGGTTGTTTTGATTCACATTTC  399

seq1  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  439
      ||||||||||||||||| |||||||||||||||||||||||| |||||||
seq2  CCTGATGATTAAGGATGCTGAACATTTTTTCAGGTGCTTCTCAGCCATTC  449

seq1  GGTATTCCTCAGGTGAGAATTC  461
      ||||||||||||||||||||||
seq2  GGTATTCCTCAGGTGAGAATTC  471

seq1: chr18_41370613_41370731
seq2: B6Ng01-145K05.g_695_812 (reverse)

seq1  ACACACATGATATGCACTCACTGATAAGTGGATATTAACCCAGAAACAAT  50
      |||||| ||||||||||||||||||||||| |||||| || ||||||  |
seq2  ACACACCTGATATGCACTCACTGATAAGTGAATATTAGCCTAGAAAC-TT  49

seq1  AGACTACCCAAGATATAATTTGCAAAACACATGAAACTCAAGAAGTAGGA  100
      ||| ||||||||||| ||||||||||||||||||||||| ||||| | ||
seq2  AGAATACCCAAGATACAATTTGCAAAACACATGAAACTCGAGAAGAAAGA  99

seq1  AGACCAAAGTGTGGATACT  119
      |||||||||||||||||||
seq2  AGACCAAAGTGTGGATACT  118