BAC Information

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BAC

Clone NameB6Ng01-145O15
Chromosome10 (Build37)
Map Location 23,672,116 - 23,822,386
singlet/doubletdoublet
Overlap geneTaar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3
Downstream geneTaar9, Stx7, Moxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O15.bB6Ng01-145O15.g
ACCDH943192DH943193
length1,0981,109
definitionDH943192|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O15, 5' end.DH943193|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,672,116 - 23,673,225)(23,821,271 - 23,822,386)
sequence
gaattcttcaatattcctgttgtgcaaataaagattcttcaaggtaacat
tggcttttaagttaagaccacttgtaagacaatactagaaaatgcagttt
ttccttaaaatttttatttatttataattttagcttataaatagaacttc
tatttgtacacttgcgatttttgaaaaccacttttgaatataaccacagc
ctagttgttggttaacattgtgcatatattttggagattaaaatgtttac
atgctagtttggggcatttaatcggcagactcgtatattatgaacccatt
ctcaagcttatataatgccttttgaactgatgacttgcaaatgtgctgtt
ttaagatgcttaataattacaatattctacaggctttggggcttcaaggt
atgtgctttttcttgaacttagccatctctacactaatttgaagtcttca
caaatttgaatattagggttctttagatagagctcataactataattttt
aaaaattaaactaaacctggtttaagtcaattaaaatgttaaaaaggaaa
cttttccaaaaaatgtctgatgatttctttttcttgaaatcgaatataga
aacatcaaaagttggaagatgagtggggcctgttgatgcaaaggcctcag
cctgtcatcttcatgtgcagactcttcaagcgtcttcctcagagggacat
atatctcacagatacacagtacacacagggacagccacaagccatcccaa
atggaaatattgctcccacacttacaaaatgcctaaatattattacattg
gttttcctcttggttgctccacagtgtattatgtctcagagatttattat
atatcaataaacataaatctgtgttttcagactatataatgctctatttt
taaaagtatcgtattctatttaactgcttatagtttctgggtcttttgct
tgcatgcatatccaagcatctatcaacagtgctttggaagtttggctttt
gaaattattttactcatctctgatgctactgcaattgctctcttctgtta
taagattattgatcgattggagaatttgttgcattatatctgtcgtaa
gaattcatctatcaaataagaacgatctgtgtatgaggctaagaatatta
aatagttaatataattgacgaatactgaacttttcagagtagtcaaaaaa
ttcttggttctggctatcagcactactcgcacaaattagcagtgtacaga
gaaacataatttatagaacttactaattataattaacaacagtgattgtg
gtttgaagattcacaccttacactgtagggatccctcatgtgaactttac
agtagatggagtggattggctgtcttctgaaaacaacatagaacttgaaa
tactattaaaggtgaccctttgaatgtaccattatactatgtcatcatct
tttgcaagaaaggaatctactctcaattactcaggtaattggatagttga
aagtcagtattaaatttgcctgggattaacagtgatgtttaacatagtta
taggaataattgtacgactatagatgagaaaattgtttttctgtgcttta
atatttcttcatttctttaaaattaaaatagaaaaaagaatttataatct
tgggtaatatttaaaattaattcttcagtatggagttcatttctttaatt
tttatatctcaaaattactgttgtcttctagcaggacagaaatcccccaa
gcatcaaaaagcagattcatgaccagcaacttttcccaaccagccctgca
gctctgctatgagaacacgaatggatcctgtattaaaactccctattctc
cagggccccgggtcatcctgtacatggtctatggctttggggctgtgctg
gcagtgtgtgggaacctcctggtggtgatttcagttctccatttcaagca
gctgcactctccagccaatttctcatcgcctctctggccagtgctgactt
cttggtgggcatctctgtgatgcccttcagcatggtcaggtccattgaga
gctgctggtactttggagatgcattttgtagccttcacagttgctgtgga
tgtggctttttggtactcttctggcctccacctgtgctcaaccagtgaca
ggtacttagctgtacggaacctctggtctatcccacagttacagggtctg
tgtctggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23672116_23673225
seq2: B6Ng01-145O15.b_48_1145

seq1  GAATTCTTCAATATTCCTGTTGTGCAAATAAAGATTCTTCAAGGTAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAATATTCCTGTTGTGCAAATAAAGATTCTTCAAGGTAACAT  50

seq1  TGGCTTTTAAGTTAAGACCACTTGTAAGACAATACTAGAAAATGCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTAAGTTAAGACCACTTGTAAGACAATACTAGAAAATGCAGTTT  100

seq1  TTCCTTAAAATTTTTATTTATTTATAATTTTAGCTTATAAATAGAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAAATTTTTATTTATTTATAATTTTAGCTTATAAATAGAACTTC  150

seq1  TATTTGTACACTTGCGATTTTTGAAAACCACTTTTGAATATAACCACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTACACTTGCGATTTTTGAAAACCACTTTTGAATATAACCACAGC  200

seq1  CTAGTTGTTGGTTAACATTGTGCATATATTTTGGAGATTAAAATGTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGTTGGTTAACATTGTGCATATATTTTGGAGATTAAAATGTTTAC  250

seq1  ATGCTAGTTTGGGGCATTTAATCGGCAGACTCGTATATTATGAACCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGTTTGGGGCATTTAATCGGCAGACTCGTATATTATGAACCCATT  300

seq1  CTCAAGCTTATATAATGCCTTTTGAACTGATGACTTGCAAATGTGCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTTATATAATGCCTTTTGAACTGATGACTTGCAAATGTGCTGTT  350

seq1  TTAAGATGCTTAATAATTACAATATTCTACAGGCTTTGGGGCTTCAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATGCTTAATAATTACAATATTCTACAGGCTTTGGGGCTTCAAGGT  400

seq1  ATGTGCTTTTTCTTGAACTTAGCCATCTCTACACTAATTTGAAGTCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTTTTTCTTGAACTTAGCCATCTCTACACTAATTTGAAGTCTTCA  450

seq1  CAAATTTGAATATTAGGGTTCTTTAGATAGAGCTCATAACTATAATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGAATATTAGGGTTCTTTAGATAGAGCTCATAACTATAATTTTT  500

seq1  AAAAATTAAACTAAACCTGGTTTAAGTCAATTAAAATGTTAAAAAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAACTAAACCTGGTTTAAGTCAATTAAAATGTTAAAAAGGAAA  550

seq1  CTTTTCCAAAAAATGTCTGATGATTTCTTTTTCTTGAAATCGAATATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAAAAAATGTCTGATGATTTCTTTTTCTTGAAATCGAATATAGA  600

seq1  AACATCAAAAGTTGGAAGATGAGTGGGGCCTGTTGATGCAAAGGCCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAAAAGTTGGAAGATGAGTGGGGCCTGTTGATGCAAAGGCCTCAG  650

seq1  CCTGTCATCTTCATGTGCAGACTCTTCAAGCGTCTTCCTCAGAGGGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATCTTCATGTGCAGACTCTTCAAGCGTCTTCCTCAGAGGGACAT  700

seq1  ATATCTCACAGATACACAGTACACACAGGGACAGCCACAAGCCATCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCACAGATACACAGTACACACAGGGACAGCCACAAGCCATCCCAA  750

seq1  ATGGAAATATTGCTCCCACACTTACAAAATGCCTAAATATTATTACATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATATTGCTCCCACACTTACAAAATGCCTAAATATTATTACATTG  800

seq1  GTTTTCCTCTTGGTTGCTCCACAGTGTATTATGTCTCAGAGATTTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTCTTGGTTGCTCCACAGTGTATTATGTCTCAGAGATTTATTAT  850

seq1  ATATCAATAAACATAAATCTGTGTTTTCAGACTATATAATGCTCTATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATAAACATAAATCTGTGTTTTCAGACTATATAATGCTCTATTTT  900

seq1  TAAAAGTATCGTATTCTATTTAACTGCTTATAGTTTCT-GGTCTTTTGCT  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAAAGTATCGTATTCTATTTAACTGCTTATAGTTTCTGGGTCTTTTGCT  950

seq1  TGCATGCATATCCAAGGCATCTATCAACCAGTGCTTTGGAAGTTTGGCTT  999
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TGCATGCATATCCAA-GCATCTATCAA-CAGTGCTTTGGAAGTTTGGCTT  998

seq1  TTGAAAATTATTTTACTCCAATTCTCTGATGCTACTGC-ATTGCTTCTCT  1048
      ||| ||||||||||||||    |||||||||||||||| ||||| |||||
seq2  TTG-AAATTATTTTACTC---ATCTCTGATGCTACTGCAATTGC-TCTCT  1043

seq1  TTCTGTGTAATAAGATTATTTGATCGATTGGAG-ATTTGTATGCAATTTA  1097
         | ||| ||||||||| |||||||||||||| |||||| ||||  |||
seq2  ---TCTGTTATAAGATTA-TTGATCGATTGGAGAATTTGT-TGCA--TTA  1086

seq1  TATCTGTCTGTAA  1110
      |||||||| ||||
seq2  TATCTGTC-GTAA  1098

seq1: chr10_23821271_23822386
seq2: B6Ng01-145O15.g_67_1175 (reverse)

seq1  TTCCAGACACAGACACTGTGAACTTGGTGGGATAGACCAGAGGGTCCGTG  50
      |||||||||||||| |||| ||||  ||||||||||||||||| ||||| 
seq2  TTCCAGACACAGACCCTGT-AACT--GTGGGATAGACCAGAGGTTCCGT-  46

seq1  ACAGCTATGTACCTGTCCACTGAGATGAAGCACAGGTGGAGGGCAGAAGA  100
      ||||||| |||||||| ||||| | || |||||||||||||| |||||||
seq2  ACAGCTAAGTACCTGT-CACTG-GTTG-AGCACAGGTGGAGGCCAGAAGA  93

seq1  GTAACAAAAAGCCACAT-CACAGCAACTGTGAAGGCTACAAAATGCATCT  149
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTACCAAAAAGCCACATCCACAGCAACTGTGAAGGCTACAAAATGCATCT  143

seq1  CCAAAGTACCAGCAGCTCTCAATGGACCTGACCATGCTGAAGGGCATCAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTACCAGCAGCTCTCAATGGACCTGACCATGCTGAAGGGCATCAC  193

seq1  AGAGATGCCCACCAAGAAGTCAGCACTGGCCAGAGAGGCGATGAGAAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGATGCCCACCAAGAAGTCAGCACTGGCCAGAGAGGCGATGAG-AAAT  242

seq1  TGGCTGGAGAGTGCAGCTGCTTGAAATGGAGAACTGAAATCACCACCAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAGAGTGCAGCTGCTTGAAATGGAGAACTGAAATCACCACCAGG  292

seq1  AGGTTCCCACACACTGCCAGCACAGCCCCAAAGCCATAGACCATGTACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCCACACACTGCCAGCACAGCCCCAAAGCCATAGACCATGTACAG  342

seq1  GATGACCCGGGGCCCTGGAGAATAGGGAGTTTTAATACAGGATCCATTCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCCGGGGCCCTGGAGAATAGGGAGTTTTAATACAGGATCCATTCG  392

seq1  TGTTCTCATAGCAGAGCTGCAGGGCTGGTTGGGAAAAGTTGCTGGTCATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCATAGCAGAGCTGCAGGGCTGGTTGGGAAAAGTTGCTGGTCATG  442

seq1  AATCTGCTTTTTGATGCTTGGGGGATTTCTGTCCTGCTAGAAGACAACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTTTTTGATGCTTGGGGGATTTCTGTCCTGCTAGAAGACAACAG  492

seq1  TAATTTTGAGATATAAAAATTAAAGAAATGAACTCCATACTGAAGAATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGAGATATAAAAATTAAAGAAATGAACTCCATACTGAAGAATTA  542

seq1  ATTTTAAATATTACCCAAGATTATAAATTCTTTTTTCTATTTTAATTTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATATTACCCAAGATTATAAATTCTTTTTTCTATTTTAATTTTA  592

seq1  AAGAAATGAAGAAATATTAAAGCACAGAAAAACAATTTTCTCATCTATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGAAGAAATATTAAAGCACAGAAAAACAATTTTCTCATCTATAG  642

seq1  TCGTACAATTATTCCTATAACTATGTTAAACATCACTGTTAATCCCAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACAATTATTCCTATAACTATGTTAAACATCACTGTTAATCCCAGGC  692

seq1  AAATTTAATACTGACTTTCAACTATCCAATTACCTGAGTAATTGAGAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAATACTGACTTTCAACTATCCAATTACCTGAGTAATTGAGAGTA  742

seq1  GATTCCTTTCTTGCAAAAGATGATGACATAGTATAATGGTACATTCAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTTCTTGCAAAAGATGATGACATAGTATAATGGTACATTCAAAG  792

seq1  GGTCACCTTTAATAGTATTTCAAGTTCTATGTTGTTTTCAGAAGACAGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTTTAATAGTATTTCAAGTTCTATGTTGTTTTCAGAAGACAGCC  842

seq1  AATCCACTCCATCTACTGTAAAGTTCACATGAGGGATCCCTACAGTGTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACTCCATCTACTGTAAAGTTCACATGAGGGATCCCTACAGTGTAA  892

seq1  GGTGTGAATCTTCAAACCACAATCACTGTTGTTAATTATAATTAGTAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAATCTTCAAACCACAATCACTGTTGTTAATTATAATTAGTAAGT  942

seq1  TCTATAAATTATGTTTCTCTGTACACTGCTAATTTGTGCGAGTAGTGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAATTATGTTTCTCTGTACACTGCTAATTTGTGCGAGTAGTGCTG  992

seq1  ATAGCCAGAACCAAGAATTTTTTGACTACTCTGAAAAGTTCAGTATTCGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGAACCAAGAATTTTTTGACTACTCTGAAAAGTTCAGTATTCGT  1042

seq1  CAATTATATTAACTATTTAATATTCTTAGCCTCATACACAGATCGTTCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATTAACTATTTAATATTCTTAGCCTCATACACAGATCGTTCTT  1092

seq1  ATTTGATAGATGAATTC  1116
      |||||||||||||||||
seq2  ATTTGATAGATGAATTC  1109