BAC Information

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BAC

Clone NameB6Ng01-146H23
Chromosome10 (Build37)
Map Location 100,210,969 - 100,211,764
singlet/doubletsinglet
Overlap genenone
Upstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146H23.bB6Ng01-146H23.g
ACCDH943627DH943628
length1,204794
definitionDH943627|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H23, 5' end.DH943628|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccaaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaacccagagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatgagtctggtggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
ttatatccagaagatgtcccaaccagtaagaaggtcacatgctccactat
gttcatagcagccttatttataattgccagaagctggaaagaacccaaat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattccttggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtgtatactagcccagaaac
ttagtatagcgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaaagaagaccaaagtgtggacactttgccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagatactgccatatccagggatccattccataatta
gcctgaaatgatgacaccattgttaagaaggtcacatgctccactatgtt
catagcagccttatttattaattccagaagctggcaattatacaatacac
atacactagcaagcatttgatgcaaggactgtgatatagctcttctcttg
tgagactatgccgggtcctagcaaacacagaagtggatgctcacagtcac
tattgatggatcacaggccccaatgagagctagagaaagttatccagagt
tatgaagatctgcaacctgttagtgcacattatgactaaccagtaacccg
gagctcttgtctcaagctgcatattatgtaaggatggcctagtcgcatac
tgaaagaagttcattggacggcacctttaatgtccactacaggggaatgt
ctcg
gaattcaggtggcatatctgcttaaacctttttgtacaacattaatgatt
ttgaacgtcatacttttctaatttactctgagccaaataagtattaccat
gcaagttatatgtgttactcgattgggggattatgctcagtttttattaa
tatagtaaaaccattttgcatataaactcctcttatttaaatatcaatca
tttatgatttgtctttctctgtacagcagtggatttgtgtgtctctgtgt
cagatgctttcgtgattctgtagtagaaatgcaaaaaatatggggctgtg
tctatagcaacagcctacatcaccatttcatcctacacataaccagcaat
ttcagtaattacattccttgtattcagtctgaccagaggtacacaaaagg
atcattgaaggatatgatctattttttcctttcaaaaatagcaaaatgtt
gaaggaaaaccatttttgtacaagtatatatatatatatatatatatata
tatatatatatatatatatatatataaatacatatatatatatatgctgt
ggtctatagtgaaagtaagttagggtaaaattgctcaaaatttgctgtcc
ctcaaagtgtgacccaaattatctattcagaaaattaacatggtaaagcg
aagttactttactacagccctaaaaatgtattctgggggaaaaaccatta
atatgcatttaataagtttcttaaatatttttatgctgttaaagattaag
acctagtgccctagggataatttgtatttgtattcataaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100210969_100211764
seq2: B6Ng01-146H23.g_71_864

seq1  GAATTCAGGTGGCATATCTGCTTAAACCTTTTTGTACAACATTAATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGGCATATCTGCTTAAACCTTTTTGTACAACATTAATGATT  50

seq1  TTGAACGTCATACTTTTCTAATTTACTCTGAGCCAAATAAGTATTACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACGTCATACTTTTCTAATTTACTCTGAGCCAAATAAGTATTACCAT  100

seq1  GCAAGTTATATGTGTTACTCGATTGGGGGATTATGCTCAGTTTTTATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTATATGTGTTACTCGATTGGGGGATTATGCTCAGTTTTTATTAA  150

seq1  TATAGTAAAACCATTTTGCATATAAACTCCTCTTATTTAAATATCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAAAACCATTTTGCATATAAACTCCTCTTATTTAAATATCAATCA  200

seq1  TTTATGATTTGTCTTTCTCTGTACAGCAGTGGATTTGTGTGTCTCTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATTTGTCTTTCTCTGTACAGCAGTGGATTTGTGTGTCTCTGTGT  250

seq1  CAGATGCTTTCGTGATTCTGTAGTAGAAATGCAAAAAATATGGGGCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTTTCGTGATTCTGTAGTAGAAATGCAAAAAATATGGGGCTGTG  300

seq1  TCTATAGCAACAGCCTACATCACCATTTCATCCTACACATAACCAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGCAACAGCCTACATCACCATTTCATCCTACACATAACCAGCAAT  350

seq1  TTCAGTAATTACATTCCTTGTATTCAGTCTGACCAGAGGTACACAAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAATTACATTCCTTGTATTCAGTCTGACCAGAGGTACACAAAAGG  400

seq1  ATCATTGAAGGATATGATCTATTTTTTCCTTTCAAAAATAGCAAAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGAAGGATATGATCTATTTTTTCCTTTCAAAAATAGCAAAATGTT  450

seq1  GAAGGAAAACCATTTTTGTACAAGTATATATATATATATATATATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAACCATTTTTGTACAAGTATATATATATATATATATATATATA  500

seq1  TATATATATATATATATATATATATAAAGACAACATTTAT-TTTAGGCTG  549
      |||||||||||||||||||||||||||| || | || ||| | || ||||
seq2  TATATATATATATATATATATATATAAATAC-ATATATATATATATGCTG  549

seq1  TGGTCTTTAGTGAAAGTAAGTTAGGGTAAAATTGCTCAAAATTTGCTGTT  599
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGTCTATAGTGAAAGTAAGTTAGGGTAAAATTGCTCAAAATTTGCTGTC  599

seq1  CCTCAAAGTGTGACCCAAATTATCTATTCTG-AAATTAACTTGTTAAAGC  648
      ||||||||||||||||||||||||||||| | |||||||| || ||||||
seq2  CCTCAAAGTGTGACCCAAATTATCTATTCAGAAAATTAACATGGTAAAGC  649

seq1  GAAGTTTCTTTACTACAGCCCTAAAAATGTATTCT-GGGTAAAATCCATT  697
      |||||| |||||||||||||||||||||||||||| ||| |||| |||||
seq2  GAAGTTACTTTACTACAGCCCTAAAAATGTATTCTGGGGGAAAAACCATT  699

seq1  AATATGCATTTTAATAAGTTTCTTAGAGACTTTTATGCTTGTTAAAGATT  747
      |||||||| |||||||||||||||| | | |||||||| |||||||||||
seq2  AATATGCA-TTTAATAAGTTTCTTAAATATTTTTATGC-TGTTAAAGATT  747

seq1  AAGAACTAGTGCCCTAGGGGTAATTTGTATTTATAATTCATAAAATACA  796
      |||| |||||||||||||| |||||||||||| | |||||| |||||||
seq2  AAGACCTAGTGCCCTAGGGATAATTTGTATTTGT-ATTCAT-AAATACA  794