BAC Information

Click to search

BAC

Clone NameB6Ng01-146I03
Chromosome10 (Build37)
Map Location 98,920,766 - 98,921,571
singlet/doubletsinglet
Overlap geneLOC100042232
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps
Downstream geneLOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146I03.bB6Ng01-146I03.g
ACCDH943635DH943636
length1,258805
definitionDH943635|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I03, 5' end.DH943636|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagctcattacca
gccagctaatcggttaagaaaaaagccaaaagcggctggcgaaagccagc
atactgttcagcctccgggcagtcggcttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagccctgcgcagagaggcaatgcgcaga
gaggcaatgcgcagagaggcaatgcgcagagagacaatgcgcagagaggc
aatgcgcagactcattcattcccagagaggaacaaaggaaaatacaacag
gcatttccagtctttgaaggagccgagggtgggcgtgtccacgctccggt
agaatacgtgcagattaaagaactcgccgagtcggtccgtaaatacggaa
ccaatgctaattttaccttggtgcagttagacaggcttgccggcatggca
ctaactcctgccgactggcaaacgattgtaaaagccgctctccctagtat
gggcaaatatatggaatggagagcgctttggcacgaagctgcacaagcgc
aggcccgagcaaacgcagctgctttgactccagagcagagagattggact
tttgacttgttaacgggtcagggagcttattctgctgatcagacaaacta
ccattggggagcttatgcccaaatttcctccacggctattagggcctgga
aggcgctctcccgagcaggtgaagccactggacaattaacaaggatcgtc
cagggacctcaagagtccttctcagattttgtggccagtatgacagaggc
aggctcttgcagcctacaaggtcttattgtccaccctagagttgtagatc
aagattataaaggggaacttcagttctctgttcttgtcctcaagttgtct
tttctatatcacaaggggacaaaatagctcaactaataatttgccaagcc
tacatggctgttttttcttcctctggtattcctagagctgcaagaggatt
agttccactaaaaatgattctgattacttataatgccttagaatgttgtt
caaattttttactcacgtaaggttaaaccctctggcgtcaggccattaca
ggtctgaccatgatgtccgcatattttctctctttggagaatcaaattac
atgttagatagaagaagaatacctccatctacgattcaagcgtttgggat
atggtcgactttaatctctccgtgattagcctgtttgcatttatgagaga
gactccta
gaattcctggtaagtccaggcaggattgaaggctttgtggatatagcaat
caacttggaggggggaagatggtctcgggcaggaagcagctgacagcagg
tgcttcctctgacgctgagagctagtaagtgacttcctaggctatgaccc
ctttccagtatttgtgggaaggagaagatatttcaataaaatgatagcag
acagaccggagattctagacactttttaaacacattcttagtacatttgg
attccttgctagttcaagtgatgctttttaaatgcttgttgccctgaagt
ttgtgagtctatgcaaaggcatttagtggcagagccttaaaagctggaga
cctttctaatgcggttcctaatgctgcaagcctttaaatatagttccttg
ggttatggtgaccctgcaaccataagattatgttgttgctactttataac
tttgctacagttacgaattataatgtaaatatatgatattcaatggtcct
agttgacccctgagaaacagattgaaaaaacttgctgaagattgtggaaa
gtatcaactggctactttgttgttgttttacaatgctttgtttagtcatt
ttgtgaataggcatacattttcaccggactaaaactcacactgtatttac
ttaatcatctgtctgtactctgctctaggagcctctgccaacccccaaac
ctcagcgtttcataccgaaatggatgtagagaggagagatggagagagga
ggagactttccctggtttagtttgaactgtaaaggacctttgtctgtggt
caggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98920766_98921571
seq2: B6Ng01-146I03.g_67_871

seq1  GAATTCCTGGTAAGTCCAGGCAGGATTGAAGGCTTTGTGGATATAGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTAAGTCCAGGCAGGATTGAAGGCTTTGTGGATATAGCAAT  50

seq1  CAACTTGGAGGGGGGAAGATGGTCTCGGGCAGGAAGCAGCTGACAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGGAGGGGGGAAGATGGTCTCGGGCAGGAAGCAGCTGACAGCAGG  100

seq1  TGCTTCCTCTGACGCTGAGAGCTAGTAAGTGACTTCCTAGGCTATGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCTGACGCTGAGAGCTAGTAAGTGACTTCCTAGGCTATGACCC  150

seq1  CTTTCCAGTATTTGTGGGAAGGAGAAGATATTTCAATAAAATGATAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTATTTGTGGGAAGGAGAAGATATTTCAATAAAATGATAGCAG  200

seq1  ACAGACCGGAGATTCTAGACACTTTTTAAACACATTCTTAGTACATTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCGGAGATTCTAGACACTTTTTAAACACATTCTTAGTACATTTGG  250

seq1  ATTCCTTGCTAGTTCAAGTGATGCTTTTTAAATGCTTGTTGCCCTGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGCTAGTTCAAGTGATGCTTTTTAAATGCTTGTTGCCCTGAAGT  300

seq1  TTGTGAGTCTATGCAAAGGCATTTAGTGGCAGAGCCTTAAAAGCTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTCTATGCAAAGGCATTTAGTGGCAGAGCCTTAAAAGCTGGAGA  350

seq1  CCTTTCTAATGCGGTTCCTAATGCTGCAAGCCTTTAAATATAGTTCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTAATGCGGTTCCTAATGCTGCAAGCCTTTAAATATAGTTCCTTG  400

seq1  GGTTATGGTGACCCTGCAACCATAAGATTATGTTGTTGCTACTTTATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGGTGACCCTGCAACCATAAGATTATGTTGTTGCTACTTTATAAC  450

seq1  TTTGCTACAGTTACGAATTATAATGTAAATATATGATATTCAATGGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTACAGTTACGAATTATAATGTAAATATATGATATTCAATGGTCCT  500

seq1  AGTTGACCCCTGAGAAACAGATTGAAAAAACTTGCTGAAGATTGTGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACCCCTGAGAAACAGATTGAAAAAACTTGCTGAAGATTGTGGAAA  550

seq1  GTATCAACTGGCTACTTTGTTGTTGTTTTACAATGCTTTGTTTAGTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAACTGGCTACTTTGTTGTTGTTTTACAATGCTTTGTTTAGTCATT  600

seq1  TTGTGAATAGGCATACATTTTCACCGGACTAAAACTCACACTGTATTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATAGGCATACATTTTCACCGGACTAAAACTCACACTGTATTTAC  650

seq1  TTAATCATCTGTCTGTACTCTGCTCTAGGAGCCTCTGCCAACCCCCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATCTGTCTGTACTCTGCTCTAGGAGCCTCTGCCAACCCCCAAAC  700

seq1  CTCAGCGTTTCATACCGAAATGGATGTAGAGAGGAGAGATGGAGAGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCGTTTCATACCGAAATGGATGTAGAGAGGAGAGATGGAGAGAGGA  750

seq1  GGAGACTTTCCCTGGTTTAGCTTGAACTGTAAAGGACCGTTGTCTGTGGT  800
      |||||||||||||||||||| ||||||||||||||||| |||||||||| 
seq2  GGAGACTTTCCCTGGTTTAGTTTGAACTGTAAAGGACCTTTGTCTGTGG-  799

seq1  TCAGGG  806
      ||||||
seq2  TCAGGG  805