BAC Information

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BAC

Clone NameB6Ng01-146J07
Chromosome10 (Build37)
Map Location 103,881,965 - 103,883,094
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146J07.bB6Ng01-146J07.g
ACCDH943687DH943688
length1,1461,107
definitionDH943687|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J07, 5' end.DH943688|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaactctgtacccaaaatttcataggcttatttgattt
tctggagtctaacttcttgagttctttgtatatgttggataatatacccc
tattggatttaggattggtgaagatcttttcccaatctgttggttgctgt
tttgtcttattgacagtgccctttgccttacagaagctttgcaattttat
gaggtcccatttgccaattcttgatcttgtatcacaagccattgctgttc
tgttcaggaatttccccactgtgcccatatcttcaaggcttttcaccact
atctcctctattagtttcagtatctctggttttatgtggagtttcttgat
ccacgtagacttgagctttatacacggagataagaattaatcaattcaca
ttcttctatatgctaaccaccagttgagccagcaccacaaatagaaacag
aaggtactctacccaagtcattctataaagccacaattcctttgatacct
aaacctcacaaagatccaacaaagaaaaagaacttcagatcaattttcct
tatgactatcgatgtaaacatacccaataaaattcttgcaaactgaatcc
aagaacacatcaaaacaatcatccatcatgattaagtaggcttcatgcca
gggttgcagggatggttcaataaatagaaacccatcaatgtaatccacta
cataaagaaattcaatgaaaaaaataacccacatgatcatcgcaattgat
gctgagaaagcatttgacaaaatccaacacccgttcatgataaaagtctt
agaaagatcagaattcaagcccatacctaaacatgataaagcattataca
gcaaacagtagctaacatcattctaaatggagaagaacttgaacatccca
ctaaaatcaaggactaagagaagcgacacctctctcctacatatcaatac
agtacttggaggtctagcgagcattagcaacatggaaataagttcacggt
aggagatgtcaatacattgcaggtatatagtatggtatctatgacaatca
catagttctaactgtaacaattctgcagctgataaatccacagattcgct
tcctccatatgaaatgctgtagaattgtacccctctcaagtgccaa

gaattcaaatcatcggaattaacaggcattcttgtcatagtcatcgaaat
tcattgaagctgtattgatttaaccattatgatggttattttttatatat
atatatatatatatatatatatatatatatacacacacacacacatatat
atatgaaagcctacctcttttattaatgactagagaagttatactttcat
atttgaatgagtcttagggatattttatatgatcagagaaaaggatatca
ccatatgatgacagaaatatgcaatgcatttttggaccatattttcatag
gaattggtaggtcaaaaggagtgtctgcaagtataatgccttctagattc
tagattgtagagttatattagttttactacaccatagcatctaaagtaat
gaacccatagaaggaaatggggtatgcagctaggatacctttcaggccaa
gacgggttgtgccttttctgatgtgttcagatatggttgcctagaagcca
tggtagagaacatcggcaaaccactcatcttattaaacaagggagatgat
acagtgaacaagccatacattataacccccttcaaggaaatgcccacaat
gacctaaggaccctctactaacctctcaaagatgaactccctcctcccac
tctaatacttatatcatgaaaagagagatgccaacaaatagatttttgtg
cgcatgcttccaactcgtaatgaatccaccgtgggctagagaaggggata
agaggaatcttgagaaagagaaattaaacacagtgctatgtcactcagca
gcatggcaggagtctctgcctcagagtgctccaaatagcagcggtgactt
tgagcctttataagcctgtggtttattttatctatgggtagcagatgttg
ggtacagcttcacagtggctcaaagtaagcaggatctaaatgagtaaaat
ctgctattttggctctggttaaacactgtttatgtagatttatactgtgc
agcagcttttcagtttacaggtttggctgctgtgagacaagcgcatagac
ttatttacaggaaagcatatttaacttgttcatgaccacttgtaccatct
ccactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103881965_103883094
seq2: B6Ng01-146J07.g_67_1173 (reverse)

seq1  AGAGTTGAGATGGTGTTCCAGTGTGTTCCATGAACAAGTTAAATATGCTT  50
      ||||| ||||||  || | |||| ||  ||||||||||||||||||||| 
seq2  AGAGTGGAGATG--GTACAAGTG-GT--CATGAACAAGTTAAATATGCT-  44

seq1  CTCCCTGTACATTAGCTCTATGCGGCTTTGTTCTTCACAGCAGGCCAAAA  100
       | |||||| || || ||||||||   ||||   |||||||||  | |||
seq2  -TTCCTGTAAATAAG-TCTATGCG--CTTGT--CTCACAGCAG--CCAAA  86

seq1  CCTGTAAACTGAAAAGCCTGCTGGCACCAGTATAAATTCTTACATATACA  150
      |||||||||||||||| ||||| ||| ||||||||||   |||||| |||
seq2  CCTGTAAACTGAAAAG-CTGCT-GCA-CAGTATAAAT--CTACATAAACA  131

seq1  GTGTTTTAACCAGAGCCAAAATAAGCAGATTTTTACTCATTTAGATCCTG  200
      ||| |||||||||||||||||| |||||| ||||||||||||||||||||
seq2  GTG-TTTAACCAGAGCCAAAAT-AGCAGA-TTTTACTCATTTAGATCCTG  178

seq1  CTTACTTTGAGCCCACTGTGAAGCTGTACCCAACATCTGCTACCCATAGA  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTGAG-CCACTGTGAAGCTGTACCCAACATCTGCTACCCATAGA  227

seq1  TAAAATAAACCACAGGCTTATAAAGGCTCAAAGTCACCGCTGCTATTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAACCACAGGCTTATAAAGGCTCAAAGTCACCGCTGCTATTTGG  277

seq1  AGCACTCTGAGGCAGAGACTCCTGCCATGCTGCTGAGTGACATAGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTGAGGCAGAGACTCCTGCCATGCTGCTGAGTGACATAGCACTG  327

seq1  TGTTTAATTTCTCTTTCTCAAGATTCCTCTTATCCCCTTCTCTAGCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTTCTCTTTCTCAAGATTCCTCTTATCCCCTTCTCTAGCCCAC  377

seq1  GGTGGATTCATTACGAGTTGGAAGCATGCGCACAAAAATCTATTTGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTCATTACGAGTTGGAAGCATGCGCACAAAAATCTATTTGTTGG  427

seq1  CATCTCTCTTTTCATGATATAAGTATTAGAGTGGGAGGAGGGAGTTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTTTTCATGATATAAGTATTAGAGTGGGAGGAGGGAGTTCATC  477

seq1  TTTGAGAGGTTAGTAGAGGGTCCTTAGGTCATTGTGGGCATTTCCTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGGTTAGTAGAGGGTCCTTAGGTCATTGTGGGCATTTCCTTGAA  527

seq1  GGGGGTTATAATGTATGGCTTGTTCACTGTATCATCTCCCTTGTTTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTATAATGTATGGCTTGTTCACTGTATCATCTCCCTTGTTTAATA  577

seq1  AGATGAGTGGTTTGCCGATGTTCTCTACCATGGCTTCTAGGCAACCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGTGGTTTGCCGATGTTCTCTACCATGGCTTCTAGGCAACCATAT  627

seq1  CTGAACACATCAGAAAAGGCACAACCCGTCTTGGCCTGAAAGGTATCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACATCAGAAAAGGCACAACCCGTCTTGGCCTGAAAGGTATCCTA  677

seq1  GCTGCATACCCCATTTCCTTCTATGGGTTCATTACTTTAGATGCTATGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATACCCCATTTCCTTCTATGGGTTCATTACTTTAGATGCTATGGT  727

seq1  GTAGTAAAACTAATATAACTCTACAATCTAGAATCTAGAAGGCATTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAAACTAATATAACTCTACAATCTAGAATCTAGAAGGCATTATAC  777

seq1  TTGCAGACACTCCTTTTGACCTACCAATTCCTATGAAAATATGGTCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACACTCCTTTTGACCTACCAATTCCTATGAAAATATGGTCCAAA  827

seq1  AATGCATTGCATATTTCTGTCATCATATGGTGATATCCTTTTCTCTGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTGCATATTTCTGTCATCATATGGTGATATCCTTTTCTCTGATC  877

seq1  ATATAAAATATCCCTAAGACTCATTCAAATATGAAAGTATAACTTCTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATATCCCTAAGACTCATTCAAATATGAAAGTATAACTTCTCTA  927

seq1  GTCATTAATAAAAGAGGTAGGCTTTCATATATATATGTGTGTGTGTGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTAATAAAAGAGGTAGGCTTTCATATATATATGTGTGTGTGTGTGT  977

seq1  ATATATATATATATATATATATATATATATATATATAAAAAATAACCATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATAAAAAATAACCATC  1027

seq1  ATAATGGTTAAATCAATACAGCTTCAATGAATTTCGATGACTATGACAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGTTAAATCAATACAGCTTCAATGAATTTCGATGACTATGACAAG  1077

seq1  AATGCCTGTTAATTCCGATGATTTGAATTC  1130
      ||||||||||||||||||||||||||||||
seq2  AATGCCTGTTAATTCCGATGATTTGAATTC  1107


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