BAC Information

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BAC

Clone NameB6Ng01-147E22
Chromosome10 (Build37)
Map Location 86,764,636 - 86,893,605
singlet/doubletdoublet
Overlap genenone
Upstream geneSyn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2, 1700113H08Rik
Downstream geneAscl1, Pah, LOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147E22.bB6Ng01-147E22.g
ACCDH944225DH944226
length1,0151,079
definitionDH944225|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E22, 5' end.DH944226|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,764,636 - 86,765,456)(86,892,508 - 86,893,605)
sequence
gaattctttgtttagctctgtacccatttttaatagggtcatttgatttt
ctggagtccaacttcttgagttctttatatatattgaatgttagccccct
atcagatttaggattggtaacaatcttttcccaatctgttggttgccatt
ttgtcttattgacagtgtcctttgtcatacaaaagctttgcaactttatg
aggtcccatttgtcggttcttgatctagattagcctcatcttcaacaaca
acaacaacaacaacaaaaatccagaaaaagagtggacttagaaatttttg
tgttatttgatttcaagttcaatgtgtgataattaacttttattgtttaa
tttaccagagttagaatatcctaggagacacatctctgtctgtgtgtttc
ttcttcttaagggatcttcagagatgtttaactgtaagaagactcaccta
aacataataaaagcaatctacagcaaaccagtagccaacatcaaagtaaa
tggagagaagctggaagcaatcccactaaaatcagggactagacaaggtt
gcccactttctccctaccttttcaacatagtacttgaagtattagccaga
gcaattcgacaacaaaaggagatcaaggggatacaaattggaaaagagga
agtcaaaatatcactttttgcagatgatatgatagtatatataagtgacc
ctaaaaattccaccagagaactcctaaacctgataaacagctttggtgaa
gtagctggatataaaattaactcaaacaagtcaatggcctttctctacac
aaagaataaacaggctgagaaagaaattagggaaacaacacccttctcaa
tagtcacaaataatataaaatatctcggcgtgactctaactaaggaagta
aaagatctgtatgataaaaacttcaagtctctgaagaaagaaattaaagg
agatctcagaagatggaaagatctcccatgctcatggattggcaggatca
acattgtaaaatggc
gaattctggctaaaccattcatttccccattagaagtattatacagtcac
tgtacgcctcttcctttggtgacaagcccacccctttattaacactctag
taaacgcatgaacacatgaacatgctccgactcttctctgccttctgcca
tgccggttcacaaggacaagaagaaagacttgcttaagcatctggatggg
aaatgactgctaatctgagttttacttttgcatggatagagtcagtgttt
gagagatttcaggtcccatgggctttgtaagcaagagtgatggcaacttt
gacacttgtggatcatgattcgggctgtctgtgaggtgtttgcttggggc
tgggtcggtaagaggaatgtccccattctttccttatctgactattcctt
tggttgcggcaggtgtagagataactttccagtaatgaccagaagcaata
gccctcacttttacaggaacttgccatctggtcctgagggccagagataa
ttcagtctcctagttagctcagtacccagcaacgtctgataaatgaatct
gattatattggtaactggcagtgtcaataccacagcagcatttggcctct
ggaagcgagctcttcagatgttttttttccccaaaaccagccgagttcta
attaaattaacatatctcaaaatggagcacattgcttaagggggaagggg
tcacattttatgaaggccacatgaaacactgaaaatacatttgcatagcc
tacacatcttttaactaacctttgatctcatacagtaagaaagcagattc
aatttgagccttgtttactctagactgaataagtgaacccaggaattttt
cttcctaataaaaatggttagtattgaagcattctgaaactgcccaaagc
taataagctccgtggtgggaaagggaaaacaataggtgtgcccatcagca
agatgagagctacgagatgcatgatacaggcacagaatgtttttgaccca
gtgtctggattggatgcttcaagtgatagattttaccacattcttactct
catgaagtcatcaggtgctcttgccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_86764636_86765456
seq2: B6Ng01-147E22.b_46_866

seq1  GAATTCTTTGTTTAGCTCTGTACCCATTTTTAATAGGGTCATTTGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCATTTTTAATAGGGTCATTTGATTTT  50

seq1  CTGGAGTCCAACTTCTTGAGTTCTTTATATATATTGAATGTTAGCCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCCAACTTCTTGAGTTCTTTATATATATTGAATGTTAGCCCCCT  100

seq1  ATCAGATTTAGGATTGGTAACAATCTTTTCCCAATCTGTTGGTTGCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTTAGGATTGGTAACAATCTTTTCCCAATCTGTTGGTTGCCATT  150

seq1  TTGTCTTATTGACAGTGTCCTTTGTCATACAAAAGCTTTGCAACTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTATTGACAGTGTCCTTTGTCATACAAAAGCTTTGCAACTTTATG  200

seq1  AGGTCCCATTTGTCGGTTCTTGATCTAGATTAGCCTCATCTTCAACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCATTTGTCGGTTCTTGATCTAGATTAGCCTCATCTTCAACAACA  250

seq1  ACAACAACAACAACAAAAATCCAGAAAAAGAGTGGACTTAGAAATTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAAAAATCCAGAAAAAGAGTGGACTTAGAAATTTTTG  300

seq1  TGTTATTTGATTTCAAGTTCAATGTGTGATAATTAACTTTTATTGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGATTTCAAGTTCAATGTGTGATAATTAACTTTTATTGTTTAA  350

seq1  TTTACCAGAGTTAGAATATCCTAGGAGACACATCTCTGTCTGTGTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGAGTTAGAATATCCTAGGAGACACATCTCTGTCTGTGTGTTTC  400

seq1  TTCTTCTTAAGGGATCTTCAGAGATGTTTAACTGTAAGAAGACTCACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTAAGGGATCTTCAGAGATGTTTAACTGTAAGAAGACTCACCTA  450

seq1  AACATAATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAA  500

seq1  TGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGTT  550

seq1  GCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGA  600

seq1  GCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGA  650

seq1  AGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACC  700

seq1  CTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTTGGTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTTGGTGAA  750

seq1  GTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACAC  800

seq1  AAAGAATAAACAGGCTGAGAA  821
      |||||||||||||||||||||
seq2  AAAGAATAAACAGGCTGAGAA  821

seq1: chr10_86892508_86893605
seq2: B6Ng01-147E22.g_67_1145 (reverse)

seq1  AAATGGC-AGAGCCACACTGATGACTTCCAATTGAGAGTTAAGGAATTGT  49
      ||||||| |||| ||| |||||||||||    |||||| ||||  | |||
seq2  AAATGGCAAGAG-CAC-CTGATGACTTC---ATGAGAG-TAAG--AATGT  42

seq1  GGTAAAAATCTATCAACTTG-AGCATCCAATCCAGACAACTGGGTTCAAA  98
      ||| |||||||||| ||||| |||||||||||||||| |||||| |||||
seq2  GGT-AAAATCTATC-ACTTGAAGCATCCAATCCAGAC-ACTGGG-TCAAA  88

seq1  AACATTTCCTTGTGCCTGTATCATGCATCTCGTAGCTCTTCCTTCTTTTG  148
      ||||||    |||||||||||||||||||||||||||||  | ||  |||
seq2  AACATT---CTGTGCCTGTATCATGCATCTCGTAGCTCT--CATC--TTG  131

seq1  CTTGATGGGCACACCTATTGTTTTCCCTTTCCAACCACGGAGCTTATTAG  198
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  C-TGATGGGCACACCTATTGTTTTCCCTTTCCCACCACGGAGCTTATTAG  180

seq1  CTTTGGGCAGTTTCAGAATGCTTCAATACTAACCATTTTTATTAGGAAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGCAGTTTCAGAATGCTTCAATACTAACCATTTTTATTAGGAAGA  230

seq1  AAAATTTCCTGGGTTCACTTATTCAGTCTAGAGTAAACAAGGCTCAAATT  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAA-TTCCTGGGTTCACTTATTCAGTCTAGAGTAAACAAGGCTCAAATT  279

seq1  GAATCTGCTTTCTTACTGTATGAGATCAAAGGTTAGTTAAAAGATGTGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCTTTCTTACTGTATGAGATCAAAGGTTAGTTAAAAGATGTGTA  329

seq1  GGCTATGCAAATGTATTTTCAGTGTTTCATGTGGCCTTCATAAAATGTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGCAAATGTATTTTCAGTGTTTCATGTGGCCTTCATAAAATGTGA  379

seq1  CCCCTTCCCCCTTAAGCAATGTGCTCCATTTTGAGATATGTTAATTTAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCCCCTTAAGCAATGTGCTCCATTTTGAGATATGTTAATTTAAT  429

seq1  TAGAACTCGGCTGGTTTTGGGGAAAAAAAACATCTGAAGAGCTCGCTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCGGCTGGTTTTGGGGAAAAAAAACATCTGAAGAGCTCGCTTCC  479

seq1  AGAGGCCAAATGCTGCTGTGGTATTGACACTGCCAGTTACCAATATAATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCAAATGCTGCTGTGGTATTGACACTGCCAGTTACCAATATAATC  529

seq1  AGATTCATTTATCAGACGTTGCTGGGTACTGAGCTAACTAGGAGACTGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCATTTATCAGACGTTGCTGGGTACTGAGCTAACTAGGAGACTGAA  579

seq1  TTATCTCTGGCCCTCAGGACCAGATGGCAAGTTCCTGTAAAAGTGAGGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGGCCCTCAGGACCAGATGGCAAGTTCCTGTAAAAGTGAGGGC  629

seq1  TATTGCTTCTGGTCATTACTGGAAAGTTATCTCTACACCTGCCGCAACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTCTGGTCATTACTGGAAAGTTATCTCTACACCTGCCGCAACCA  679

seq1  AAGGAATAGTCAGATAAGGAAAGAATGGGGACATTCCTCTTACCGACCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAGTCAGATAAGGAAAGAATGGGGACATTCCTCTTACCGACCCA  729

seq1  GCCCCAAGCAAACACCTCACAGACAGCCCGAATCATGATCCACAAGTGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAGCAAACACCTCACAGACAGCCCGAATCATGATCCACAAGTGTC  779

seq1  AAAGTTGCCATCACTCTTGCTTACAAAGCCCATGGGACCTGAAATCTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGCCATCACTCTTGCTTACAAAGCCCATGGGACCTGAAATCTCTC  829

seq1  AAACACTGACTCTATCCATGCAAAAGTAAAACTCAGATTAGCAGTCATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGACTCTATCCATGCAAAAGTAAAACTCAGATTAGCAGTCATTT  879

seq1  CCCATCCAGATGCTTAAGCAAGTCTTTCTTCTTGTCCTTGTGAACCGGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCAGATGCTTAAGCAAGTCTTTCTTCTTGTCCTTGTGAACCGGCA  929

seq1  TGGCAGAAGGCAGAGAAGAGTCGGAGCATGTTCATGTGTTCATGCGTTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAAGGCAGAGAAGAGTCGGAGCATGTTCATGTGTTCATGCGTTTA  979

seq1  CTAGAGTGTTAATAAAGGGGTGGGCTTGTCACCAAAGGAAGAGGCGTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTGTTAATAAAGGGGTGGGCTTGTCACCAAAGGAAGAGGCGTACA  1029

seq1  GTGACTGTATAATACTTCTAATGGGGAAATGAATGGTTTAGCCAGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTATAATACTTCTAATGGGGAAATGAATGGTTTAGCCAGAATTC  1079