BAC Information

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BAC

Clone NameB6Ng01-147G17
Chromosome10 (Build37)
Map Location 41,136,268 - 41,305,664
singlet/doubletdoublet
Overlap geneLOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik
Upstream geneCdc2l6, Slc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik
Downstream geneEG629461, 2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147G17.bB6Ng01-147G17.g
ACCDH944309DH944310
length805864
definitionDH944309|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G17, 5' end.DH944310|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,304,863 - 41,305,664)(41,136,268 - 41,137,131)
sequence
gaattctaaccactaatagtgttactgcctgcctagttaaatacccaatt
ataatttacgtaggcgtatatggaagacaaagcagccaaaatgtataaaa
gcctccacccattagtggtccaggtgtagcctttggatgaggatcccaca
gaagccagacactgacaccggcttagtagactgtttcccagtgtaccacc
ctctgagtatcccagaacaaaatcacaatagccatttggcagggctgaga
tgcagtcttaagagtagtttcaatttgcatttccctgatagccaaagata
ccaaatacctttaactggacttactgaccatttgtatttatttcttcttg
gggaattctttggtgttgctaaccttggccttttttttgactgggttgtt
ttcttaatttgtttgtttttcttttatactttattttcttttgtgtgtgt
gtgtgtgtgtcctttttctgcatctgtgaaggtgcccacagaggttagaa
gacagtgtcacatctcttgcagttggagccgcaggttgttgtgagccacc
ctatctgggtgctgggaaccaaactcgctcgggtcctccgtaggaggagc
agcatatcaacagtaagtcatccctccatccccagggacactgctttaaa
agtgagctagattatgtcacagctgtccttagagcctctcaatgctttca
aatactcagacagagccccaaaggtctaacagacttttgctctcagccct
tctatctcaccctctttcctttccacactttcatatttcatacacactca
cacgc
gaattcatttagtttatgctagtcttaaaaggtctttacttctctttcta
ttttgaatgataacttggtttgctataataatttattttccttcatggct
tgaacgtctttcctgaagcctttggagtttcttctgagaaatatgtatgt
gtatgtgtgggaaattttctgtcattgttttactgatgggtttttgttgt
tgttgttgttgttcctctgcctgtgtttctcctttgtatgaactgatcac
actcctcttaaaatgatcttttgatagtatcctatagatctcaagtatct
tgtttattctgtcttattattctttattgctctctgaatataagttgtcg
agttttgtcttcaaaccctggtgttcttccacttaatctaagctgttggt
gggtgatgctttcaaatgtttcttttaagtttgatttattgagatatcta
ttttcaggatttctgttggttttttttccaagcatttctcctttttctct
ctttaaactttttacagattctttgtgaatttcacatcattcactccaat
cccacacatctccccatcccttgatatatgccctccccccatgcaacctc
cctacccctgaaaagaaaagaaaaacaaaacaaaaatctctccatggaag
ctgtggtattgttggagtcggtcaaaagacacttactcacaaagaccaca
gagaccgccatcattgcaaaccgcaaaaaggatttttattgatccaacac
attggggacacccctctcagcaagcaggccagaggagagacccaaaacaa
acaagaacactctttttataccttgtaaggagcagatttaggcaacaggg
ctagctggcttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41304863_41305664
seq2: B6Ng01-147G17.b_44_848 (reverse)

seq1  GTGTGTGTGTGTGTATG-AATATGAATGTGTGGAAAGGAAAGAGGCTGAG  49
      | ||||| ||||||||| |||||||| |||||||||||||||||| ||||
seq2  GCGTGTGAGTGTGTATGAAATATGAAAGTGTGGAAAGGAAAGAGGGTGAG  50

seq1  ATAGAAGGGCTGAGAGC-AAAGTCTGTTAGACCTTT-GGGCTCTGTCCTG  97
      ||||||||||||||||| |||||||||||||||||| ||||||||| |||
seq2  ATAGAAGGGCTGAGAGCAAAAGTCTGTTAGACCTTTGGGGCTCTGT-CTG  99

seq1  AGTATTTGAAAGCATTGAGAGGCTCTAAGGACAGCTGTGACATAATCTAG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGAAAGCATTGAGAGGCTCTAAGGACAGCTGTGACATAATCTAG  149

seq1  CTCACTTTTAAAGCAGTGT-CCTGGGGATGGAGGGATGACTTACTGTTGA  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCACTTTTAAAGCAGTGTCCCTGGGGATGGAGGGATGACTTACTGTTGA  199

seq1  TATGCTGCTCCTCCTACGGAGGACCCGAGCGAGTTTGGTTCCCAGCACCC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGCTCCTCCTACGGAGGACCCGAGCGAGTTTGGTTCCCAGCACCC  249

seq1  AGATAGGGTGGCTCACAACAACCTGCGGCTCCAACTGCAAGAGATGTGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGGTGGCTCACAACAACCTGCGGCTCCAACTGCAAGAGATGTGAC  299

seq1  ACTGTCTTCTAACCTCTGTGGGCACCTTCACAGATGCAGAAAAAGGACAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTTCTAACCTCTGTGGGCACCTTCACAGATGCAGAAAAAGGACAC  349

seq1  ACACACACACACACAAAAGAAAATAAAGTATAAAAGAAAAACAAACAAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACAAAAGAAAATAAAGTATAAAAGAAAAACAAACAAAT  399

seq1  TAAGAAAACAACCCAGTCAAAAAAAAGGCCAAGGTTAGCAACACCAAAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAACAACCCAGTCAAAAAAAAGGCCAAGGTTAGCAACACCAAAGA  449

seq1  ATTCCCCAAGAAGAAATAAATACAAATGGTCAGTAAGTCCAGTTAAAGGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCAAGAAGAAATAAATACAAATGGTCAGTAAGTCCAGTTAAAGGT  499

seq1  ATTTGGTATCTTTGGCTATCAGGGAAATGCAAATTGAAACTACTCTTAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTATCTTTGGCTATCAGGGAAATGCAAATTGAAACTACTCTTAAG  549

seq1  ACTGCATCTCAGCCCTGCCAAATGGCTATTGTGATTTTGTTCTGGGATAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCTCAGCCCTGCCAAATGGCTATTGTGATTTTGTTCTGGGATAC  599

seq1  TCAGAGGGTGGTACACTGGGAAACAGTCTACTAAGCCGGTGTCAGTGTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGTGGTACACTGGGAAACAGTCTACTAAGCCGGTGTCAGTGTCT  649

seq1  GGCTTCTGTGGGATCCTCATCCAAAGGCTACACCTGGACCACTAATGGGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGTGGGATCCTCATCCAAAGGCTACACCTGGACCACTAATGGGT  699

seq1  GGAGGCTTTTATACATTTTGGCTGCTTTGTCTTCCATATACGCCTACGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTTTTATACATTTTGGCTGCTTTGTCTTCCATATACGCCTACGTA  749

seq1  AATTATAATTGGGTATTTAACTAGGCAGGCAGTAACACTATTAGTGGTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATTGGGTATTTAACTAGGCAGGCAGTAACACTATTAGTGGTTA  799

seq1  GAATTC  802
      ||||||
seq2  GAATTC  805

seq1: chr10_41136268_41137131
seq2: B6Ng01-147G17.g_69_932

seq1  GAATTCATTTAGTTTATGCTAGTCTTAAAAGGTCTTTACTTCTCTTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGTTTATGCTAGTCTTAAAAGGTCTTTACTTCTCTTTCTA  50

seq1  TTTTGAATGATAACTTGGTTTGCTATAATAATTTATTTTCCTTCATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATGATAACTTGGTTTGCTATAATAATTTATTTTCCTTCATGGCT  100

seq1  TGAACGTCTTTCCTGAAGCCTTTGGAGTTTCTTCTGAGAAATATGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTCTTTCCTGAAGCCTTTGGAGTTTCTTCTGAGAAATATGTATGT  150

seq1  GTATGTGTGGGAAATTTTCTGTCATTGTTTTACTGATGGGTTTTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGGGAAATTTTCTGTCATTGTTTTACTGATGGGTTTTTGTTGT  200

seq1  TGTTGTTGTTGTTCCTCTGCCTGTGTTTCTCCTTTGTATGAACTGATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTCCTCTGCCTGTGTTTCTCCTTTGTATGAACTGATCAC  250

seq1  ACTCCTCTTAAAATGATCTTTTGATAGTATCCTATAGATCTCAAGTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTTAAAATGATCTTTTGATAGTATCCTATAGATCTCAAGTATCT  300

seq1  TGTTTATTCTGTCTTATTATTCTTTATTGCTCTCTGAATATAAGTTGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTCTGTCTTATTATTCTTTATTGCTCTCTGAATATAAGTTGTCG  350

seq1  AGTTTTGTCTTCAAACCCTGGTGTTCTTCCACTTAATCTAAGCTGTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTCTTCAAACCCTGGTGTTCTTCCACTTAATCTAAGCTGTTGGT  400

seq1  GGGTGATGCTTTCAAATGTTTCTTTTAAGTTTGATTTATTGAGATATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGCTTTCAAATGTTTCTTTTAAGTTTGATTTATTGAGATATCTA  450

seq1  TTTTCAGGATTTCTGTTGGTTTTTTTTCCAAGCATTTCTCCTTTTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGATTTCTGTTGGTTTTTTTTCCAAGCATTTCTCCTTTTTCTCT  500

seq1  CTTTAAACTTTTTACAGATTCTTTGTGAATTTCACATCATTCACTCCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACTTTTTACAGATTCTTTGTGAATTTCACATCATTCACTCCAAT  550

seq1  CCCACACATCTCCCCATCCCTTGATATATGCCCTCCCCCCATGCAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACATCTCCCCATCCCTTGATATATGCCCTCCCCCCATGCAACCTC  600

seq1  CCTACCCCTGAAAAGAAAAGAAAAACAAAACAAAAATCTCTCCATGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCTGAAAAGAAAAGAAAAACAAAACAAAAATCTCTCCATGGAAG  650

seq1  CTGTGGTATTGTTGGAGTCGGTCAAAAGACACTTACTCACAAAGACCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTATTGTTGGAGTCGGTCAAAAGACACTTACTCACAAAGACCACA  700

seq1  GAGACCGCCATCATTGCAAACCGC-AAAAGGATTTTTATTGATCCAACAC  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGACCGCCATCATTGCAAACCGCAAAAAGGATTTTTATTGATCCAACAC  750

seq1  ATTGGGGACACCCCTCTCAGCAAGCAGGCCAGAGGAGAGACCCAAAACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGACACCCCTCTCAGCAAGCAGGCCAGAGGAGAGACCCAAAACAA  800

seq1  ACAAAGAACACACTTTTTATACCTTGTAAGGAGCAGATTTAGGCAACAGG  849
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AC-AAGAACACTCTTTTTATACCTTGTAAGGAGCAGATTTAGGCAACAGG  849

seq1  GCTAGCTGGCTTATT  864
      |||||||||||||||
seq2  GCTAGCTGGCTTATT  864