BAC Information

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BAC

Clone NameB6Ng01-147M14
Chromosome10 (Build37)
Map Location 110,539,188 - 110,739,057
singlet/doubletdoublet
Overlap geneEG432502, LOC667904, Osbpl8, Bbs10
Upstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
Downstream geneNap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147M14.bB6Ng01-147M14.g
ACCDH944568DH944569
length7881,108
definitionDH944568|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M14, 5' end.DH944569|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,539,188 - 110,539,973)(110,737,951 - 110,739,057)
sequence
gaattccatgactcacagagggtgagttttagtaagaacggttctattgc
agaaaactcaaaaaggaaaaagtcagggtccccatgccactgggttccca
gaaagtgggattccagtgagtctcccaatgagacctcactggatggaggc
ctggagctggggtgagccgatcaagcccgctcccattcctggtctcagcc
ctgacatcatatttggtttctgggaaaagggttcctttaggccaagggag
ataaggcaaaactgcttctatttcctggcacccgtggcctctggccagga
cagaaccgaaagcacttaggcttaaatatctctggcatctttggcctcca
gcgaggaggatgcagctggtgggacccagagtatttcctgctttagcaga
ggggaatctgtgcgtgtttggagccgattaatcctgcattgatgcggtag
tttccatgtgtggttcttgttaccaagtttgttttccaacagtgtttctt
tatccaagactaagcgtaaaaccaagccaccaatcagcagcttcttgcgc
attccgaatcttgaaaggaaagcgaacgcctccgagacacttttcaaaga
acttggaccagtcactgctgtggatgtttcttaaatcacctatgccttca
atcttatgagcgtcagactttctggtcttcaagacagacaatcaagtttc
taaattctgtttcatgtttgcaggtgaagcagacaggattctggcagcgg
gaatcaaaagcttgcttcattcagaaacgtgccccccc
gaattcacaatgaatagtcctatttttgaacaggtattcaaaggtgcaga
ttttggaattatttactgtttacgtgcatgcatgtgcatgtgcagtgcca
cagtgtacgtgtggagctttgtggaattggttctttctttccaattcagg
ttgcctggcttgggtggcaaatggtcctacttgctgaaccatctccccag
cccccaaccaaccgttttcaataactagaaataaaccaaatgacaaccac
aaggacaattaacttacatgcttcttacaaagaaaaattgacttttattt
actgctttacataagagataacattttatactcatgttcacaaacaatgt
aagatggcatgtgaagacctcgttcaagtggggaggttacacgactctat
gacatacagaaagttcaaggaaacaaagtgggaaaaggtacagaagaggg
agctatagaggcaagctcccttagacagactagcgcagaccagagacaag
gagacagatttagccagtttttgttccatagagctgatacctgttgtctg
aatggtctggtggactcaatggacttaaggactgggttgacttcagtcag
ccagaagcctgttttaatatttagcttgagctgaatacatttttttccta
acgtttagtgtttgtctgcgaacatgtgtgtacaacaaaggacatgtctc
aggacttcaccctctccttccaccctgggtgatgaccgcaggcagtcagt
caggtttgccattaaatgcctttgcccactgagccatttctctggcccca
gactgaaagttcgagcaacagaaaactgagtgttaaattcgtcttctgat
tcttggtcagcagtttctgaggttgcctcttgatgttgattattaaatca
atggtatattttcatcaaacactgaagaactgaagttagtaattggttac
ttaccagctactgactcgaaccctgattgaccacttaccatgggttgact
tgccttgcagtgcatggagaagaaccgcatgatatagtgtggaaactgtt
cttttcccttcttaggcttattaaggatttagggatggctagagaagagc
atcagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110539188_110539973
seq2: B6Ng01-147M14.b_44_831

seq1  GAATTCCATGACTCACAGAGGGTGAGTTTTAGTAAGAACGGTTCTATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACTCACAGAGGGTGAGTTTTAGTAAGAACGGTTCTATTGC  50

seq1  AGAAAACTCAAAAAGGAAAAAGTCAGGGTCCCCATGCCACTGGGTTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTCAAAAAGGAAAAAGTCAGGGTCCCCATGCCACTGGGTTCCCA  100

seq1  GAAAGTGGGATTCCAGTGAGTCTCCCAATGAGACCTCACTGGATGGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGGGATTCCAGTGAGTCTCCCAATGAGACCTCACTGGATGGAGGC  150

seq1  CTGGAGCTGGGGTGAGCCGATCAAGCCCGCTCCCATTCCTGGTCTCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTGGGGTGAGCCGATCAAGCCCGCTCCCATTCCTGGTCTCAGCC  200

seq1  CTGACATCATATTTGGTTTCTGGGAAAAGGGTTCCTTTAGGCCAAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCATATTTGGTTTCTGGGAAAAGGGTTCCTTTAGGCCAAGGGAG  250

seq1  ATAAGGCAAAACTGCTTCTATTTCCTGGCACCCGTGGCCTCTGGCCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCAAAACTGCTTCTATTTCCTGGCACCCGTGGCCTCTGGCCAGGA  300

seq1  CAGAACCGAAAGCACTTAGGCTTAAATATCTCTGGCATCTTTGGCCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCGAAAGCACTTAGGCTTAAATATCTCTGGCATCTTTGGCCTCCA  350

seq1  GCGAGGAGGATGCAGCTGGTGGGACCCAGAGTATTTCCTGCTTTAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGAGGATGCAGCTGGTGGGACCCAGAGTATTTCCTGCTTTAGCAGA  400

seq1  GGGGAATCTGTGCGTGTTTGGAGCCGATTAATCCTGCATTGATGCGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATCTGTGCGTGTTTGGAGCCGATTAATCCTGCATTGATGCGGTAG  450

seq1  TTTCCATGTGTGGTTCTTGTTACCAAGTTTGTTTTCCAACAGTGTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTGTGGTTCTTGTTACCAAGTTTGTTTTCCAACAGTGTTTCTT  500

seq1  TATCCAAGACTAAGCGTAAAACCAAGCCACCAATCAGCAGCTTCTTGCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAGACTAAGCGTAAAACCAAGCCACCAATCAGCAGCTTCTTGCGC  550

seq1  ATTCCGAATCTTGAAAGGAAAGCGAACGCCTCCGAGACACTTTTCAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGAATCTTGAAAGGAAAGCGAACGCCTCCGAGACACTTTTCAAAGA  600

seq1  ACTTGGACCAGTCACTGCTGTGGATGTTTCTTAAATCACCTATGCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGACCAGTCACTGCTGTGGATGTTTCTTAAATCACCTATGCCTTCA  650

seq1  ATCTTATGAGCGTCAGACTTTCTGGTCTTCAAGACAGACAATCAAGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGAGCGTCAGACTTTCTGGTCTTCAAGACAGACAATCAAGTTTC  700

seq1  TAAATTCTGTTTCATCTTTGCAGGTGAAGCAGACAGGATTCTGGCAGC-G  749
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  TAAATTCTGTTTCATGTTTGCAGGTGAAGCAGACAGGATTCTGGCAGCGG  750

seq1  GAATCAAAAGCTTGCTTCATTCAG-AACGTGCCCCCCC  786
      |||||||||||||||||||||||| |||||||||||||
seq2  GAATCAAAAGCTTGCTTCATTCAGAAACGTGCCCCCCC  788

seq1: chr10_110737951_110739057
seq2: B6Ng01-147M14.g_73_1180 (reverse)

seq1  TAGCTGATGCTCT--TCTAGGCATCCCTAAAATCCTTTATAAGCCTAAGA  48
      |||||||||||||  ||||| ||||||| |||||||| ||||||||||||
seq2  TAGCTGATGCTCTTCTCTAGCCATCCCT-AAATCCTTAATAAGCCTAAGA  49

seq1  AGGG-AAAGGACAGTTTCCCACACATATA-CATGCGGT--CTCTCCATGC  94
      |||| |||| ||||||| |||||| |||| ||||||||   |||||||||
seq2  AGGGAAAAGAACAGTTT-CCACAC-TATATCATGCGGTTCTTCTCCATGC  97

seq1  ACTGCAA-GCCAGTCAACCCATGGTAAGTGGTCAATCAGGGTTCGAGTCA  143
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGGCAAGTCAACCCATGGTAAGTGGTCAATCAGGGTTCGAGTCA  147

seq1  GTAGCTGGTAAGT-ACCAATTACTAACTTCAGTTCTTCAGTGTTTGATGA  192
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGGTAAGTAACCAATTACTAACTTCAGTTCTTCAGTGTTTGATGA  197

seq1  AAATATTAACCATTGATTTAATAATCAACATCAAGAGGCAACCTCAGAAA  242
      ||||||  ||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATAT--ACCATTGATTTAATAATCAACATCAAGAGGCAACCTCAG-AA  244

seq1  ACTGCTGACCAAGAATCAGAAGACGAATTTTAACACTCAGTTTTCTGTTG  292
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTGCTGACCAAGAATCAGAAGACGAA-TTTAACACTCAGTTTTCTGTTG  293

seq1  CTCGAACTTTCAGTCTGGGGCCAGAGAAATGGCTCAGTGGGCAAAGGCAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAACTTTCAGTCTGGGGCCAGAGAAATGGCTCAGTGGGCAAAGGCAT  343

seq1  TTAATGGCAAACCTGACTGACTGCCTGCGGTCATCACCCAGGGTGGAAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCAAACCTGACTGACTGCCTGCGGTCATCACCCAGGGTGGAAGG  393

seq1  AGAGGGTGAAGTCCTGAGACATGTCCTTTGTTGTACACACATGTTCGCAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGAAGTCCTGAGACATGTCCTTTGTTGTACACACATGTTCGCAG  443

seq1  ACAAACACTAAACGTTAGGAAAAAAATGTATTCAGCTCAAGCTAAATATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACTAAACGTTAGGAAAAAAATGTATTCAGCTCAAGCTAAATATT  493

seq1  AAAACAGGCTTCTGGCTGACTGAAGTCAACCCAGTCCTTAAGTCCATTGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGCTTCTGGCTGACTGAAGTCAACCCAGTCCTTAAGTCCATTGA  543

seq1  GTCCACCAGACCATTCAGACAACAGGTATCAGCTCTATGGAACAAAAACT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACCAGACCATTCAGACAACAGGTATCAGCTCTATGGAACAAAAACT  593

seq1  GGCTAAATCTGTCTCCTTGTCTCTGGTCTGCGCTAGTCTGTCTAAGGGAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATCTGTCTCCTTGTCTCTGGTCTGCGCTAGTCTGTCTAAGGGAG  643

seq1  CTTGCCTCTATAGCTCCCTCTTCTGTACCTTTTCCCACTTTGTTTCCTTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCTATAGCTCCCTCTTCTGTACCTTTTCCCACTTTGTTTCCTTG  693

seq1  AACTTTCTGTATGTCATAGAGTCGTGTAACCTCCCCACTTGAACGAGGTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTGTATGTCATAGAGTCGTGTAACCTCCCCACTTGAACGAGGTC  743

seq1  TTCACATGCCATCTTACATTGTTTGTGAACATGAGTATAAAATGTTATCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCCATCTTACATTGTTTGTGAACATGAGTATAAAATGTTATCT  793

seq1  CTTATGTAAAGCAGTAAATAAAAGTCAATTTTTCTTTGTAAGAAGCATGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTAAAGCAGTAAATAAAAGTCAATTTTTCTTTGTAAGAAGCATGT  843

seq1  AAGTTAATTGTCCTTGTGGTTGTCATTTGGTTTATTTCTAGTTATTGAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATTGTCCTTGTGGTTGTCATTTGGTTTATTTCTAGTTATTGAAA  893

seq1  ACGGTTGGTTGGGGGCTGGGGAGATGGTTCAGCAAGTAGGACCATTTGCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTGGTTGGGGGCTGGGGAGATGGTTCAGCAAGTAGGACCATTTGCC  943

seq1  ACCCAAGCCAGGCAACCTGAATTGGAAAGAAAGAACCAATTCCACAAAGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCCAGGCAACCTGAATTGGAAAGAAAGAACCAATTCCACAAAGC  993

seq1  TCCACACGTACACTGTGGCACTGCACATGCACATGCATGCACGTAAACAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACGTACACTGTGGCACTGCACATGCACATGCATGCACGTAAACAG  1043

seq1  TAAATAATTCCAAAATCTGCACCTTTGAATACCTGTTCAAAAATAGGACT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTCCAAAATCTGCACCTTTGAATACCTGTTCAAAAATAGGACT  1093

seq1  ATTCATTGTGAATTC  1107
      |||||||||||||||
seq2  ATTCATTGTGAATTC  1108