BAC Information

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BAC

Clone NameB6Ng01-147N15
Chromosome10 (Build37)
Map Location 99,610,346 - 99,740,076
singlet/doubletdoublet
Overlap geneLOC100043211
Upstream geneWdr51b, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208
Downstream geneEG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147N15.bB6Ng01-147N15.g
ACCDH944616DH944617
length1,1641,134
definitionDH944616|Mus musculus domesticus DNA, BAC clone: B6Ng01-147N15, 5' end.DH944617|Mus musculus domesticus DNA, BAC clone: B6Ng01-147N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,738,889 - 99,740,076)(99,610,346 - 99,611,490)
sequence
gaattctgttgaagacttaacaaaggcagaggttaaattattacttaaaa
tatcccggattatagaaaaaggaaaaaagaaattaagtctctataacaac
aacaaaaaacaactacaggtcaaattcagtatcactcaaaacctctaaca
cattagcaaacacagttcaccagcctatctcagaaacagtacagtattgt
ggaggagaattaattttaggaacaaagggtttaattttaacaattctatt
agcatcatttccttaataatagtgagaataaaaaactttattcattttcc
ttcacgtcaaaaaggcatttgatacatctgccaataattactgccctgat
cttactatgacaatcctagtaggataattggcaaatccaccagagtggtc
tgaggaagattcattgcagtgatatagctgacatgaaggtcttagctacc
agcccaatcccgaacacatctcttaaatagtatattggattcttaatgtc
ttagtcagtgttctaatactgggaagatacaacatgaccattgcagctct
tctaaagaaaaacacttaactgcagcttgcttacactttcagaggtttag
tctactgtcatggcaaggagcatggtggcatgcaagctctcatgctggaa
aagtaccttgagagtttcacacctggcttcacagacatcaggaaaaaaat
gacactgggcctgcattcaacttttaaaatcccaaagcccaactacagtg
acctacttctcccaagaagaccacacctattccaacaagatcccacctcc
tgatccctctcaagtagcaccactccctaatgcccaagcattcaaatagc
tgagcctatgggagtcactcctattcaaatcaacacatctactgtgctta
tggcagccaagaaaagtgggagtgcatgaaaccttgagatctcacaatga
agtgtggtctccattggagccttacacagtaaacatcatttgagtaattt
acttcctataatagaacatgttatcttacctccaaaccctctagatatgc
cctgcactctgcagacgtgcaatattcttattaccctactgttcatctat
gcacactacatattgacctaaaacaaacgaacaacgtctttgtaaggaac
ccctccattgctgg
gaattctttgggtaggtatgcgaagatgctgtagctgaatcaataggagt
tctcttcttagttttctgaaaatcatccttaatggctacaccaacttata
ttcataccagcaggaaataagagttcctctttctctgtatcctcaccagt
attcattcttattgatgtttgtttttcctaaatgatttcctaattgatgt
ttgtttttttctaaatgatttcctaaatgattggtgtaagaatgagatgg
ctcagcagttaatagcactgactgctcttccagaggtcctgagttcaatt
ctcagcaacaacatggtgactcacaactacctgtcatgggatcttatgct
ctcttctggtgtgtctgaagatagcaacagtgtactcatataactacaaa
ttaataaataaatctaagtaaatgaatgaatttcgatgtagtttaaattc
gcatattctccattgttttccacattgaactacttatttactggccattt
gtagactaaatttaattactattttagaagtgaaagtaaaaccctaagag
aggtattaacttcctcaaatgtaacgaatggtggaatagcctcaacctgg
gccatgtctctaaagacagcatacactcaccattgccctgtttagcacct
gaaacacattcttcaagtagctgatgtaccgtctacaaagtggaactggc
agtttcattatgagctcctttcctgattgagaggtaagagaacagcttaa
aagcagagaataattcgccatcatctggtcccagctactccgatagataa
agaaatttaaacctcagtgctcatttaatccagtccccattcttcagatg
aagcaatggagacctgtgctgactaaatatttgctcaaagttaaacagag
atttcatttttttgttgttgtaaagcagacacttggcagtgtattgggtt
ctctgtacaacaaaatattgaacacaatattttgtggattgattaagaag
ctggagtctttcttgaagatagattgatggtgcatgtggctagacctgct
tgtacatctgcgaagtattaatggcgtctggccgacaaagacattcttct
ggaagtatccccaagtgctgtgcagcatgagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99738889_99740076
seq2: B6Ng01-147N15.b_48_1211 (reverse)

seq1  CCAGCAATGGAAGAGTGTTCCTCTTAACAAGAACTGTTTGTTCGTTTGTT  50
      ||||||||||| | ||     || | ||||  ||   |||||||||||||
seq2  CCAGCAATGGAGGGGT-----TCCTTACAAAGAC--GTTGTTCGTTTGTT  43

seq1  TTAGGTTCAATATGTTAGTTGTTGGCATAGATAGAAACAGTAGGGTAGAT  100
      ||||| |||||||| ||| |||  ||||||||   |||||||||||| ||
seq2  TTAGG-TCAATATG-TAG-TGT--GCATAGAT--GAACAGTAGGGTA-AT  85

seq1  AAGAAATATTGGCACGTCCTTGCAGAAGTGCAGAGCATATCTAGAGGGTT  150
      ||| |||||| |||||||  ||||| ||||||| ||||||||||||||||
seq2  AAG-AATATT-GCACGTC--TGCAG-AGTGCAGGGCATATCTAGAGGGTT  130

seq1  TGGAGGTAAGATAACATTGTTTCTATTATAGGAAGTAAAATTACTCAAAT  200
      |||||||||||||||||   |||||||||||||||| |||||||||||||
seq2  TGGAGGTAAGATAACAT--GTTCTATTATAGGAAGT-AAATTACTCAAAT  177

seq1  GATGTTTACTGTGTAAGGCTCCAATGGAGACCACACTTCATTGTGAGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTACTGTGTAAGGCTCCAATGGAGACCACACTTCATTGTGAGATC  227

seq1  TCAAGGTTTCATGCACTCCCACTTTTTCTTGGCTGCCATAAGCACAGTAG  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAAGGTTTCATGCACTCCCAC-TTTTCTTGGCTGCCATAAGCACAGTAG  276

seq1  ATGTGTTGATTTGAATAGGAGTGACTCCCATAGGCTCAGCTATTTGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGATTTGAATAGGAGTGACTCCCATAGGCTCAGCTATTTGAATG  326

seq1  CTTGGGCATTAGGGAGTGGTGCTACTTGAGAGGGATCAGGAGGTGGGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATTAGGGAGTGGTGCTACTTGAGAGGGATCAGGAGGTGGGATC  376

seq1  TTGTTGGAATAGGTGTGGTCTTCTTGGGAGAAGTAGGTCACTGTAGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAATAGGTGTGGTCTTCTTGGGAGAAGTAGGTCACTGTAGTTGG  426

seq1  GCTTTGGGATTTTAAAAGTTGAATGCAGGCCCAGTGTCATTTTTTTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGATTTTAAAAGTTGAATGCAGGCCCAGTGTCATTTTTTTCCTG  476

seq1  ATGTCTGTGAAGCCAGGTGTGAAACTCTCAAGGTACTTTTCCAGCATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTGAAGCCAGGTGTGAAACTCTCAAGGTACTTTTCCAGCATGAG  526

seq1  AGCTTGCATGCCACCATGCTCCTTGCCATGACAGTAGACTAAACCTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCATGCCACCATGCTCCTTGCCATGACAGTAGACTAAACCTCTGA  576

seq1  AAGTGTAAGCAAGCTGCAGTTAAGTGTTTTTCTTTAGAAGAGCTGCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAGCAAGCTGCAGTTAAGTGTTTTTCTTTAGAAGAGCTGCAATG  626

seq1  GTCATGTTGTATCTTCCCAGTATTAGAACACTGACTAAGACATTAAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTGTATCTTCCCAGTATTAGAACACTGACTAAGACATTAAGAAT  676

seq1  CCAATATACTATTTAAGAGATGTGTTCGGGATTGGGCTGGTAGCTAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATACTATTTAAGAGATGTGTTCGGGATTGGGCTGGTAGCTAAGAC  726

seq1  CTTCATGTCAGCTATATCACTGCAATGAATCTTCCTCAGACCACTCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTCAGCTATATCACTGCAATGAATCTTCCTCAGACCACTCTGGT  776

seq1  GGATTTGCCAATTATCCTACTAGGATTGTCATAGTAAGATCAGGGCAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGCCAATTATCCTACTAGGATTGTCATAGTAAGATCAGGGCAGTA  826

seq1  ATTATTGGCAGATGTATCAAATGCCTTTTTGACGTGAAGGAAAATGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGCAGATGTATCAAATGCCTTTTTGACGTGAAGGAAAATGAATA  876

seq1  AAGTTTTTTATTCTCACTATTATTAAGGAAATGATGCTAATAGAATTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTTATTCTCACTATTATTAAGGAAATGATGCTAATAGAATTGTT  926

seq1  AAAATTAAACCCTTTGTTCCTAAAATTAATTCTCCTCCACAATACTGTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAACCCTTTGTTCCTAAAATTAATTCTCCTCCACAATACTGTAC  976

seq1  TGTTTCTGAGATAGGCTGGTGAACTGTGTTTGCTAATGTGTTAGAGGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGAGATAGGCTGGTGAACTGTGTTTGCTAATGTGTTAGAGGTTT  1026

seq1  TGAGTGATACTGAATTTGACCTGTAGTTGTTTTTTGTTGTTGTTATAGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGATACTGAATTTGACCTGTAGTTGTTTTTTGTTGTTGTTATAGAG  1076

seq1  ACTTAATTTCTTTTTTCCTTTTTCTATAATCCGGGATATTTTAAGTAATA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTTCTTTTTTCCTTTTTCTATAATCCGGGATATTTTAAGTAATA  1126

seq1  ATTTAACCTCTGCCTTTGTTAAGTCTTCAACAGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACCTCTGCCTTTGTTAAGTCTTCAACAGAATTC  1164

seq1: chr10_99610346_99611490
seq2: B6Ng01-147N15.g_72_1205

seq1  GAATTCTTTGGGTAGGTATGCGAAGATGCTGTAGCTGAATCAATAGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGTAGGTATGCGAAGATGCTGTAGCTGAATCAATAGGAGT  50

seq1  TCTCTTCTTAGTTTTCTGAAAATCATCCTTAATGGCTACACCAACTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTAGTTTTCTGAAAATCATCCTTAATGGCTACACCAACTTATA  100

seq1  TTCATACCAGCAGGAAATAAGAGTTCCTCTTTCTCTGTATCCTCACCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACCAGCAGGAAATAAGAGTTCCTCTTTCTCTGTATCCTCACCAGT  150

seq1  ATTCATTCTTATTGATGTTTGTTTTTCCTAAATGATTTCCTAATTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCTTATTGATGTTTGTTTTTCCTAAATGATTTCCTAATTGATGT  200

seq1  TTGTTTTTTTCTAAATGATTTCCTAAATGATTGGTGTAAGAATGAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTTCTAAATGATTTCCTAAATGATTGGTGTAAGAATGAGATGG  250

seq1  CTCAGCAGTTAATAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGTTAATAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATT  300

seq1  CTCAGCAACAACATGGTGACTCACAACTACCTGTCATGGGATCTTATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAACAACATGGTGACTCACAACTACCTGTCATGGGATCTTATGCT  350

seq1  CTCTTCTGGTGTGTCTGAAGATAGCAACAGTGTACTCATATAACTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGTGTCTGAAGATAGCAACAGTGTACTCATATAACTACAAA  400

seq1  TTAATAAATAAATCTAAGTAAATGAATGAATTTCGATGTAGTTTAAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATAAATCTAAGTAAATGAATGAATTTCGATGTAGTTTAAATTC  450

seq1  GCATATTCTCCATTGTTTTCCACATTGAACTACTTATTTACTGGCCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCTCCATTGTTTTCCACATTGAACTACTTATTTACTGGCCATTT  500

seq1  GTAGACTAAATTTAATTACTATTTTAGAAGTGAAAGTAAAACCCTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTAAATTTAATTACTATTTTAGAAGTGAAAGTAAAACCCTAAGAG  550

seq1  AGGTATTAACTTCCTCAAATGTAACGAATGGTGGAATAGCCTCAACCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTAACTTCCTCAAATGTAACGAATGGTGGAATAGCCTCAACCTGG  600

seq1  GCCATGTCTCTAAAGACAGCATACACTCACCATTGCCCTGTTTAGCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTCTAAAGACAGCATACACTCACCATTGCCCTGTTTAGCACCT  650

seq1  GAAACACATTCTTCAAGTAGCTGATGTACCGTCTACAAAGTGGAACTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACATTCTTCAAGTAGCTGATGTACCGTCTACAAAGTGGAACTGGC  700

seq1  AGTTTCATTATGAGCTCCTTTCCTGATTGAGAGGTAAGAGAACAGCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATTATGAGCTCCTTTCCTGATTGAGAGGTAAGAGAACAGCTTAA  750

seq1  AAGCAGAGAATAATTCGCCATCATCTGGTCCCAGCTACTCCGATAGATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGAATAATTCGCCATCATCTGGTCCCAGCTACTCCGATAGATAA  800

seq1  AGAAATTTAAACCTCAGTGCTCATTTAATCCAGTCCCCATTCTTCAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTAAACCTCAGTGCTCATTTAATCCAGTCCCCATTCTTCAGATG  850

seq1  AAGCAATGGAGACCTGTGCTGACTAAATATTTGCTCAAAGTTAAACAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGGAGACCTGTGCTGACTAAATATTTGCTCAAAGTTAAACAGAG  900

seq1  ATTTCATTTTTTTTTGTTGTTGTTAAAGCAGACACTTGGCAGTGTATTGG  950
      ||||||  |||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTCA--TTTTTTTGTTGTTG-TAAAGCAGACACTTGGCAGTGTATTGG  947

seq1  GTTCTCTGTACAAC-AAATATTGAACACAAATATTTGTGGAATTGAATTA  999
      |||||||||||||| |||||||||||||||   ||||||| ||||| | |
seq2  GTTCTCTGTACAACAAAATATTGAACACAATATTTTGTGG-ATTGATTAA  996

seq1  GAAGCTGGAGTCTTTCTTGAGATTAGATTGATGGGTGCCATGTGGCTAGA  1049
      ||||||||||||||||||||   ||||||||| |||| ||||||||||||
seq2  GAAGCTGGAGTCTTTCTTGAAGATAGATTGAT-GGTG-CATGTGGCTAGA  1044

seq1  ACTGCTTTGTACATCTTGGCGATGT-TTAATGGCGTCTGTGCCGCACAAG  1098
       |||| ||||||||||  |||| || ||||||||||||| |||| |||| 
seq2  CCTGC-TTGTACATCT--GCGAAGTATTAATGGCGTCTG-GCCG-ACAAA  1089

seq1  GACATTCTTTCTGGAGGTATCTCCATGTGCTGTGCAGTCATGAGACT  1145
      ||||||| ||||||| ||||| ||| ||||||||||| |||||||||
seq2  GACATTC-TTCTGGAAGTATCCCCAAGTGCTGTGCAG-CATGAGACT  1134