BAC Information

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BAC

Clone NameB6Ng01-147O10
Chromosome10 (Build37)
Map Location 57,143,386 - 57,310,786
singlet/doubletdoublet
Overlap geneHsf2, Serinc1
Upstream geneEG668347, LOC100042622, LOC668355, LOC100042628, EG629739, LOC629742, LOC668363
Downstream geneLOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147O10.bB6Ng01-147O10.g
ACCDH944652DH944653
length1,1911,132
definitionDH944652|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O10, 5' end.DH944653|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,309,583 - 57,310,786)(57,143,386 - 57,144,526)
sequence
gaattcaaaagtacaaccaaaatatgcttatatgttttctgctcttgtag
ttctccaaatgctaatatagttgattgtactgtgaatatagtccgaatga
tttaaatcatagatattttattttcctacaagtttagtcattcactcctg
ccatccttattttatcacaacttaaaaaagagaatgagagctggtgctga
actcatcctgctgcccttctattgaagcagagtctacagtgtggcccata
tatctcaactctgtattgtcacatgaagtgaaatgatggttgccataaat
atttgatgttctcttcactcccactcactgtgtgctttccattctggcat
cagatgaccactttgaaagctgtgggatgcaattctctatttgctaagag
acttagaacgttttaatatgctctggggtccagagttcagccattgccag
tctataaaacattatgtaaatcacaaaagtttcctaaattctcaccattg
aggttttataaaatgatatttatttttacttttaagttttccacaaactt
atttttagtgagaaatgatttgagggcgttcgttaagttagtgtgatccc
caggtgcatttcaaattaattacagtcatgtcaaaacaggtctgctggaa
ttaaattagccttgtttttttccaacatgttcccaaatcttggaggaaag
acttccagtaaaattcaagcatcgagtttgttggtctcagaaacaggcag
atctgatggatggatttagctgtgttgtccactaatctgaagctgacctg
tgtgtatacgatgtaattgatggggtgcaaagctgtagtcaggggactcc
ccatctctctgaagctcagatgaatcctcctgaaacaatgcgctaagcaa
gcagggagagcaacagctctttcagaggaggccctttcttactgctttta
cccccggagtacttggctccgtttaagacatatttgatataaatgcactg
aatttattagcatttttaattttgttcacttgaatcagttttaaaataaa
gactcgttcctccacaccctaatgcccagaagtaaatatgttaatcttgc
ctccttaagatgtctgcatgttgtgataattaggacattctaactgaagt
aagaaagccgtaccgttctcttccatttacacatctactgt
gaattctttcttccatggttatagatatgtccaatttataatttaaatcc
ctagtttcagagtcatggagtctcaaaatattgatgttacttgatacagc
cttttaaaatgttagtgatcataaccaagacaagtatccatttaaggaat
ggttcactctgtgagacattgcatatctatttctattcctatttgatggc
acacaaaacacaatcatcattaaaataaataaaagacaatgctgctttga
tttttataatggaaagaaaaatttgccttctcatcctagatttaatatat
tcactatttcccccttcagctcctggccaaatgtgatagggatttatgtc
ttcaacagaagcatatgagggattagcaagactatgttcatctcaatcat
ttacactgttgtggggctccagattcatgtgtttgtcttcgtgccttgtc
attctgggtctcaacagtgtttcaagcagagacagcacagactttggacc
ttctgatttacatcatcctgagtctctcccttcacctcatttccactttg
aagcacaccctgacatctgtgctcatccttgtttctaagatcatttttaa
cttacactttatacacatgatgctcctggactgcttaccagtttgaaact
taatgatcatttaacctaaaccctaacatgaagtaccaagaagaaaaaaa
aactattaaaaacattggaatacaattaattttattgataaacaaaactc
tacccagttatattcatgagtcagattcataaagcaaatttataagcata
cttaagaccaatagtatgtcttttagttcataatttatttaccattaaaa
tttaatttttttctttgctgtgggtctaagactaaaatcagtagaaatta
tagtttacttacagatttccccaggctcttcctaggctacattacaaaga
tagataatcattttctcctgaaaatttgagctactctagggtgaatacaa
ttactactgaagcaaaatactgaaaacaatttagaattcaactaatcaaa
gaagtacctcttctgcattgaagacgcaagggaacctcaagctttgctga
cagttacccagattcaaagcagatcctgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_57309583_57310786
seq2: B6Ng01-147O10.b_45_1235 (reverse)

seq1  ACAGAAGAT-TGTAAATGGAAGA-AACGCGTACCTGCTTTCTT-CTTCAT  47
      |||| |||| ||||||||||||| |||| ||| | |||||||| ||||| 
seq2  ACAGTAGATGTGTAAATGGAAGAGAACG-GTA-CGGCTTTCTTACTTCA-  47

seq1  GTTAGAATGTCTACACTTATACACAAACTATGCAGGCCATCCTAAAGAGG  97
      |||||||||||   | |||| |||||   ||||| | |||| ||| || |
seq2  GTTAGAATGTC-CTAATTAT-CACAA--CATGCA-GACATCTTAAGGA-G  91

seq1  GCAAGCATTTAACAATATTAAC-TCTGGTGCATTAGGGTGTGGA-GAACG  145
      |||||   ||||| ||||| || ||||| ||||||||||||||| |||||
seq2  GCAAG--ATTAAC-ATATTTACTTCTGG-GCATTAGGGTGTGGAGGAACG  137

seq1  AGTCTGTAATTTTTAAAACTGATTCTAGTGAACAAAATATAAAAATGCTA  195
      ||||| ||  ||||||||||||||| |||||||||||| |||||||||||
seq2  AGTCTTTA--TTTTAAAACTGATTCAAGTGAACAAAAT-TAAAAATGCTA  184

seq1  ATAAATTCAGTGCATTTAATATCAAATATGTCTTAAACTGGAGCCAAGTA  245
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  ATAAATTCAGTGCATTT-ATATCAAATATGTCTTAAAC-GGAGCCAAGTA  232

seq1  CTCCGGGGGGTAAAAAGCAGTAAGAAAGGGCCTCCTCTGGAAGAGCTGTG  295
      |||||||||   ||||||||||||||||||||||||||| ||||||||| 
seq2  CTCCGGGGG--TAAAAGCAGTAAGAAAGGGCCTCCTCTGAAAGAGCTGTT  280

seq1  GCTCTCCCTGCTTGCTTAGCGCATTGTTTCAGGAGGATTCATCTGAGCTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCTGCTTGCTTAGCGCATTGTTTCAGGAGGATTCATCTGAGCTT  330

seq1  CAGAGAGATGGGGAGTCCCCTGACTACAGCTTTGCA-CCCATC-ATTACA  393
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  CAGAGAGATGGGGAGTCCCCTGACTACAGCTTTGCACCCCATCAATTACA  380

seq1  TCGTATACACACAGGTCAGCTTCAGATTAGTGGACAACACAGCTAAATCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTATACACACAGGTCAGCTTCAGATTAGTGGACAACACAGCTAAATCC  430

seq1  ATCCATCAGATCTGCCTGTTTCTGAGACCAACAAACTCGATGCTTGAATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAGATCTGCCTGTTTCTGAGACCAACAAACTCGATGCTTGAATT  480

seq1  TTACTGGAAGTCTTTCCTCCAAGATTTGGGAACATGTTGGAAAAAAACAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAAGTCTTTCCTCCAAGATTTGGGAACATGTTGGAAAAAAACAA  530

seq1  GGCTAATTTAATTCCAGCAGACCTGTTTTGACATGACTGTAATTAATTTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATTTAATTCCAGCAGACCTGTTTTGACATGACTGTAATTAATTTG  580

seq1  AAATGCACCTGGGGATCACACTAACTTAACGAACGCCCTCAAATCATTTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACCTGGGGATCACACTAACTTAACGAACGCCCTCAAATCATTTC  630

seq1  TCACTAAAAATAAGTTTGTGGAAAACTTAAAAGTAAAAATAAATATCATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAAAATAAGTTTGTGGAAAACTTAAAAGTAAAAATAAATATCATT  680

seq1  TTATAAAACCTCAATGGTGAGAATTTAGGAAACTTTTGTGATTTACATAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAACCTCAATGGTGAGAATTTAGGAAACTTTTGTGATTTACATAA  730

seq1  TGTTTTATAGACTGGCAATGGCTGAACTCTGGACCCCAGAGCATATTAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATAGACTGGCAATGGCTGAACTCTGGACCCCAGAGCATATTAAA  780

seq1  ACGTTCTAAGTCTCTTAGCAAATAGAGAATTGCATCCCACAGCTTTCAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCTAAGTCTCTTAGCAAATAGAGAATTGCATCCCACAGCTTTCAAA  830

seq1  GTGGTCATCTGATGCCAGAATGGAAAGCACACAGTGAGTGGGAGTGAAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCATCTGATGCCAGAATGGAAAGCACACAGTGAGTGGGAGTGAAGA  880

seq1  GAACATCAAATATTTATGGCAACCATCATTTCACTTCATGTGACAATACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCAAATATTTATGGCAACCATCATTTCACTTCATGTGACAATACA  930

seq1  GAGTTGAGATATATGGGCCACACTGTAGACTCTGCTTCAATAGAAGGGCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAGATATATGGGCCACACTGTAGACTCTGCTTCAATAGAAGGGCA  980

seq1  GCAGGATGAGTTCAGCACCAGCTCTCATTCTCTTTTTTAAGTTGTGATAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGAGTTCAGCACCAGCTCTCATTCTCTTTTTTAAGTTGTGATAA  1030

seq1  AATAAGGATGGCAGGAGTGAATGACTAAACTTGTAGGAAAATAAAATATC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGATGGCAGGAGTGAATGACTAAACTTGTAGGAAAATAAAATATC  1080

seq1  TATGATTTAAATCATTCGGACTATATTCACAGTACAATCAACTATATTAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTAAATCATTCGGACTATATTCACAGTACAATCAACTATATTAG  1130

seq1  CATTTGGAGAACTACAAGAGCAGAAAACATATAAGCATATTTTGGTTGTA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAGAACTACAAGAGCAGAAAACATATAAGCATATTTTGGTTGTA  1180

seq1  CTTTTGAATTC  1204
      |||||||||||
seq2  CTTTTGAATTC  1191

seq1: chr10_57143386_57144526
seq2: B6Ng01-147O10.g_71_1202

seq1  GAATTCTTTCTTCCATGGTTATAGATATGTCCAATTTATAATTTAAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCCATGGTTATAGATATGTCCAATTTATAATTTAAATCC  50

seq1  CTAGTTTCAGAGTCATGGAGTCTCAAAATATTGATGTTACTTGATACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCAGAGTCATGGAGTCTCAAAATATTGATGTTACTTGATACAGC  100

seq1  CTTTTAAAATGTTAGTGATCATAACCAAGACAAGTATCCATTTAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAATGTTAGTGATCATAACCAAGACAAGTATCCATTTAAGGAAT  150

seq1  GGTTCACTCTGTGAGACATTGCATATCTATTTCTATTCCTATTTGATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCACTCTGTGAGACATTGCATATCTATTTCTATTCCTATTTGATGGC  200

seq1  ACACAAAACACAATCATCATTAAAATAAATAAAAGACAATGCTGCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACACAATCATCATTAAAATAAATAAAAGACAATGCTGCTTTGA  250

seq1  TTTTTATAATGGAAAGAAAAATTTGCCTTCTCATCCTAGATTTAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAATGGAAAGAAAAATTTGCCTTCTCATCCTAGATTTAATATAT  300

seq1  TCACTATTTCCCCCTTCAGCTCCTGGCCAAATGTGATAGGGATTTATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTTCCCCCTTCAGCTCCTGGCCAAATGTGATAGGGATTTATGTC  350

seq1  TTCAACAGAAGCATATGAGGGATTAGCAAGACTATGTTCATCTCAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGAAGCATATGAGGGATTAGCAAGACTATGTTCATCTCAATCAT  400

seq1  TTACACTGTTGTGGGGCTCCAGATTCATGTGTTTGTCTTCGTGCCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTGTTGTGGGGCTCCAGATTCATGTGTTTGTCTTCGTGCCTTGTC  450

seq1  ATTCTGGGTCTCAACAGTGTTTCAAGCAGAGACAGCACAGACTTTGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGTCTCAACAGTGTTTCAAGCAGAGACAGCACAGACTTTGGACC  500

seq1  TTCTGATTTACATCATCCTGAGTCTCTCCCTTCACCTCATTTCCACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTTACATCATCCTGAGTCTCTCCCTTCACCTCATTTCCACTTTG  550

seq1  AAGCACACCCTGACATCTGTGCTCATCCTTGTTTCTAAGATCATTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACCCTGACATCTGTGCTCATCCTTGTTTCTAAGATCATTTTTAA  600

seq1  CTTACACTTTATACACATGATGCTCCTGGACTGCTTACCAGTTTGAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACTTTATACACATGATGCTCCTGGACTGCTTACCAGTTTGAAACT  650

seq1  TAATGATCATTTAACCTAAACCCTAACATGAAGTACCAAGAAGAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATCATTTAACCTAAACCCTAACATGAAGTACCAAGAAGAAAAAAA  700

seq1  AACTATTAAAAACATTGGAATACAATTAATTTTATTGAT-AACAAAACTC  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACTATTAAAAACATTGGAATACAATTAATTTTATTGATAAACAAAACTC  750

seq1  TACCCAGTTATATTCATGAGTCAGATTCATAAAGCAAATTTATAAGCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGTTATATTCATGAGTCAGATTCATAAAGCAAATTTATAAGCATA  800

seq1  CTTAAGACCAAATAGTATGTCTTTTAGTTCATAATTTTATTTACCATTAA  849
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  CTTAAGACC-AATAGTATGTCTTTTAGTTCATAA-TTTATTTACCATTAA  848

seq1  AATTTAATTTTTTTCTTTGCTGTGGGTCTAAGACTAAAATCAGTAGTAAT  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATTTAATTTTTTTCTTTGCTGTGGGTCTAAGACTAAAATCAGTAGAAAT  898

seq1  TATAGTTTACTTACAGATTTCCCCAGGCTCTTCCTAGGCTACATTTACAA  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATAGTTTACTTACAGATTTCCCCAGGCTCTTCCTAGGCTACA-TTACAA  947

seq1  AGATAGATAATTCATTTTCTCCTGAAAATTTGAGCTACTTCTAGGGTGGA  999
      |||||||||| ||||||||||||||||||||||||||| |||||||| ||
seq2  AGATAGATAA-TCATTTTCTCCTGAAAATTTGAGCTAC-TCTAGGGT-GA  994

seq1  ATACAATAACTACTGAAGCAAAATACTGAAAACAAATTAG-ATTCAACT-  1047
      ||||||| ||||||||||||||||||||||||||| |||| |||||||| 
seq2  ATACAATTACTACTGAAGCAAAATACTGAAAACAATTTAGAATTCAACTA  1044

seq1  ATCAAAGAAGTACCACATCTGCATTTTGAAAGAACGCAAGGGAACTCTAA  1097
      |||||||||||||| | ||||||  |||||   ||||||||||||   ||
seq2  ATCAAAGAAGTACCTCTTCTGCA--TTGAA--GACGCAAGGGAACCTCAA  1090

seq1  GCTATGCTGAGCAGTTACCCAGATTCAAAAGCAGATCCTGCTTA  1141
      ||| |||||| ||||||||||||||| |||||||||||||||||
seq2  GCTTTGCTGA-CAGTTACCCAGATTC-AAAGCAGATCCTGCTTA  1132