BAC Information

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BAC

Clone NameB6Ng01-148A15
Chromosome10 (Build37)
Map Location 112,499,516 - 112,500,682
singlet/doubletsinglet
Overlap genenone
Upstream geneGlipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639, 4921506J03Rik
Downstream geneLOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148A15.bB6Ng01-148A15.g
ACCDH944752DH944753
length1,1601,198
definitionDH944752|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A15, 5' end.DH944753|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttctatggagcaggcctgaaacccaatcacaaaatatttggt
tacctcttaataattgtgtgattattggtccagtggcaaatcttccatgg
caggtcagttttgtagcctactgtgttcacactgggtaagaccattgata
tatcttttttctttttcctttttttttttttttttttttggttttttgag
acagggtttatctgtgtagccctggctgtcctggaactcactctgtagac
caggctggcctcgaactcagaaatccgcctgcctctgcctcccgagtgct
gggattaaaggtgtgtgccaccaccacctggccattgacatatcttcatc
accagcccccaacacatgccaaaggttttcttagcatcttctagcactat
gaaaactagacagcagtcaaaaaatttcttaaattcaacgtctttatgtc
tcacaaccaaagaatgtgatgtcatcaggggagtcatatgaaatggtaat
gatggacaagcaagtatcctcaggattcatgattataagcttagttaaaa
gagctttcaacttatcatgtgttactacaagtacttatcaacttctttcc
agaatctgtcccagaaaaatgagtcaaaaaactgtactcacatactatgt
atcactaaattttagttctgttgagcatcctggaatctgtccttggtctt
acccttttgtagaggttttatgaccttaactccattttagcaacaaaagc
aatagagttttatttattccatcagttttttatggatgaattagaaataa
gatttacccatcttcacaagctgtctttcccccctttatttcctgtttca
gaatttttgcaagggctttcattaaataacataaaataattgattattta
cttcacataggcatcaaagccttttcccgtctcctctcctcccaagtcct
cattcttccctcttgccatttatccccttgtaatcctcagagaagaggag
gtctttgtggctatccttatgtcgcatttctcattgcaatgggaccaggt
gcatctccgttatgctaaacaggcaaccctgtttagggaaaggatccaag
tcaggctgcattgtcaaagacacgcccagttcagttgtttcgggtggtac
tgaagccaag
gaattcagtgtacagttgtgccagtgatcaatgaactatatcctaaacag
tctcattacctcagaacaaagaaataaagtaaaaaagacagtaatttatg
catgaatctattggagagatgataaatggaaaatttattctgttttagac
acatacacattgtgtttgtttccacggtctgaatgacatctcactggcaa
aaatgtatattctatcctgtgagataaggggacagtaaaataagcagttg
aaattgtctatttaaaactagttaacgaatgacttttaaatgatattgaa
aaaaattacattgagctttaataaattcaaaatgaagatgtagaagatct
gaaaacatctgtcttagaagagacaccataaccacagcaacccttaaaaa
ggaaaacatttaattggggctggcttacaagttcagaggttcagttaata
atcatgatggcagcaagcatggtagggtgcaggcagacaggaggctggaa
aaggagctaagagttctaaatcaaaatcagcaggcagcaagaagtgaact
ggttgagcttctggaacttcaaagcccaccccacagtgacacacttcctc
caacaaaaccatacccactccaacaaggccacacccactccagcaaggcc
acacccactccaacaaagccacacctattccaacaaggccacacctaatc
cagctactttactttcacagcttgacacaatgtcctctctgggtctccac
acaagaggacacctgccacacacctggcctcagcagctttcttcaatccc
tactaaggtaaaggatgaattgtcttggagaccccaagaggtgagagatt
ccatagccatggacacctgccaaggaaagctgttaacaggaactggaacc
agcccaagttttgcagtcagtacagctaatggagatgcagagtttaaaga
accagccccaattaaatgtgtccttttaagaagtggcttggtcatggtgt
ctctcacaacacatgaagctgtaattgtcttccaggatctggtgaatact
gagttgggaatttgatgagatgcatggactataattcactttcttaggat
gagcattttttgatgtaatcgtgcactcatcacccatgggagacctttca
tcttgaaatacttcctcatactcaccttttgaacaatattgtgttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112499516_112500682
seq2: B6Ng01-148A15.b_43_1202

seq1  GAATTCTTTTCTATGGAGCAGGCCTGAAACCCAATCACAAAATATTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTATGGAGCAGGCCTGAAACCCAATCACAAAATATTTGGT  50

seq1  TACCTCTTAATAATTGTGTGATTATTGGTCCAGTGGCAAATCTTCCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTTAATAATTGTGTGATTATTGGTCCAGTGGCAAATCTTCCATGG  100

seq1  CAGGTCAGTTTTGTAGCCTACTGTGTTCACACTGGGTAAGACCATTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGTTTTGTAGCCTACTGTGTTCACACTGGGTAAGACCATTGATA  150

seq1  TATCTTTTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAG  200

seq1  ACAGGGTTTATCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTATCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGAC  250

seq1  CAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCT  300

seq1  GGGATTAAAGGTGTGTGCCACCACCACCTGGCCATTGACATATCTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAGGTGTGTGCCACCACCACCTGGCCATTGACATATCTTCATC  350

seq1  ACCAGCCCCCAACACATGCCAAAGGTTTTCTTAGCATCTTCTAGCACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCCCAACACATGCCAAAGGTTTTCTTAGCATCTTCTAGCACTAT  400

seq1  GAAAACTAGACAGCAGTCAAAAAATTTCTTAGATTCAACGTCTTTATGTC  450
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAAACTAGACAGCAGTCAAAAAATTTCTTAAATTCAACGTCTTTATGTC  450

seq1  TCACAACCAAAGAATGTGATGTCATCAGGGGAGTCATATGAAATGGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCAAAGAATGTGATGTCATCAGGGGAGTCATATGAAATGGTAAT  500

seq1  GATGGACAAGCAAGTATCCTCAGGATTCATGATTATAAGCTTAGTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACAAGCAAGTATCCTCAGGATTCATGATTATAAGCTTAGTTAAAA  550

seq1  GAGCTTTCAACTTATCATGTGTTACTACAAGTACTTATCAACTTCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTCAACTTATCATGTGTTACTACAAGTACTTATCAACTTCTTTCC  600

seq1  AGAATCTGTCCCAGAAAAATGAGTCAAAAAACTGTACTCACATACTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGTCCCAGAAAAATGAGTCAAAAAACTGTACTCACATACTATGT  650

seq1  ATCACTAAATTTTAGTTCTGTTGAGCATCCTGGAATCTGTCCTTGGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAAATTTTAGTTCTGTTGAGCATCCTGGAATCTGTCCTTGGTCTT  700

seq1  ACCCTTTTGTAGAGGTTTTATGACCTTAACTCCATTTTAGCAACAAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTGTAGAGGTTTTATGACCTTAACTCCATTTTAGCAACAAAAGC  750

seq1  AATAGAGTTTTATTTATT-CATCAGTTATTTATGGATGAATTAGAAATAA  799
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  AATAGAGTTTTATTTATTCCATCAGTTTTTTATGGATGAATTAGAAATAA  800

seq1  GATTTACCCATCTTCACAAGCTGTCTTTCCCCCCTTTATTTCCTGTTTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCCATCTTCACAAGCTGTCTTTCCCCCCTTTATTTCCTGTTTCA  850

seq1  GTATTTTTGCAGTGGCTTTCATTAAATAACAT-AAATAATTGATTATTTA  898
      | |||||||||  ||||||||||||||||||| |||||||||||||||||
seq2  GAATTTTTGCAAGGGCTTTCATTAAATAACATAAAATAATTGATTATTTA  900

seq1  CTTCACATAGCCATCAAAGCC-TTTCCCGTCTCCTCTCCTCCCAGTTCCT  947
      |||||||||| |||||||||| ||||||||||||||||||||||  ||||
seq2  CTTCACATAGGCATCAAAGCCTTTTCCCGTCTCCTCTCCTCCCAAGTCCT  950

seq1  CATTCTTCCCTCTTGCCATTTATCCCTCTTGTAATCCTCAGAGAAGAGGA  997
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATTCTTCCCTCTTGCCATTTATCCC-CTTGTAATCCTCAGAGAAGAGGA  999

seq1  GGTCTTCTGTGGCTATCC-TATGTCGGCATTTCACATTGCAATGGGACTA  1046
      |||||| ||||||||||| |||||| ||||||| |||||||||||||| |
seq2  GGTCTT-TGTGGCTATCCTTATGTC-GCATTTCTCATTGCAATGGGACCA  1047

seq1  GGTGCATCTCCAGTTAAGGCTAGACAAGGCAACCCTGTTAGGGGAAAGGG  1096
      ||||||||||| ||| | |||| || |||||||||||||  |||||| ||
seq2  GGTGCATCTCC-GTT-ATGCTAAAC-AGGCAACCCTGTTTAGGGAAA-GG  1093

seq1  ATCCAAAGTCAGGCAGCATTGTCAGAGACAGCCCCAGTTCCAGTTGTTCG  1146
      |||| ||||||||| ||||||||| |||||  ||||||| ||||||||  
seq2  ATCC-AAGTCAGGCTGCATTGTCAAAGACACGCCCAGTT-CAGTTGTTTC  1141

seq1  GTGTGGTACATGAAGACCAAG  1167
      | ||||||| ||||| |||||
seq2  GGGTGGTAC-TGAAG-CCAAG  1160