BAC Information

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BAC

Clone NameB6Ng01-148D08
Chromosome10 (Build37)
Map Location 74,701,274 - 74,814,303
singlet/doubletdoublet
Overlap geneSpecc1l, LOC100040670, Adora2a
Upstream genePcdh15, EG630453, EG623346, Gnaz, LOC100040057, Rab36, Bcr
Downstream geneEG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D08.bB6Ng01-148D08.g
ACCDH944882DH944883
length1,2381,089
definitionDH944882|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D08, 5' end.DH944883|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,813,047 - 74,814,303)(74,701,274 - 74,702,371)
sequence
gaattcagttgcattctctggactcaaatggaaccaggcagaataatctc
actttttcatgaacctcttaggggtggctctggagtccacacttgactta
tctaggtgagagagaggccaccatcttcctctatgccctttttcttctac
atgttacctttcttcctccgcacgtgattgggaatcacagccttcagcaa
tctggtcctctgtatgagcctggcttctggaaaagacctaaataaataca
cactactgagactgatatgagctgttctattgttggttgtgcagtgctat
agaattgaacccagacccgcaggcacactgaggcagcactgagtcactga
gccacatccaaggctcttgacagaattctatacatgtgatttgggtattt
catatggcttttgcatcattttataaaagacagaaattgtgtgaacttac
agaagacatatttcctgtgtctagaaaaacaaaacaaaacaaaacaaaac
aaaacaaaacaaaacaaagcgcaaacaatgagtccccaaacaggaatggt
gagtttgaagagcttgtccctaagcctggagcacaccttcacacatgtcc
ctaggcctttgcatactggaatacttatttacaactggcaggatgaattg
aaatgtcctctactccattcagaattttgatttcctgaaatgttagtcat
ttaagagctaagaaaagaattcgctgaccttccttcctcttgctccagtt
ggcagacagaaaccatcctgggtagataaaaggtcactaaagatgactga
tctctggcattcagtccttaggtttcccggagcagtgaaaggagggccct
ctgagatggccctcggctgtcaggcaagagcccacgctggcagcgatcca
tttagcccaggcaggagggcccagtagaccaggtgggctcaggaggcacc
ttgcccagctagctccctctagtcttgctccttcttagagcacatggaac
aggaaaacaggaaatgtttctcaactaaaatgaaagaagagatgaagcac
aaactctcaactcattgtctttcttagctcttaaccgatctctggtctag
gcttccaggccaccattctgaccctctgagggagcttgttgaaaccctta
ggctaggtaggaatcagggccaggaagccagggtcgataggtcctagctt
gccatgttccacccatatgttccctctcctcccatggc
gaattctgtgtgatcagaactacacattaagagtttgtgatttggtatcc
cagtgtgtattgactttgccataacccaaagactgggattaagttccctt
gcacacgagttaaagaaaagaatatttaacagtggtggcacatgccttta
ataccagcacttgggaggcagaggcaggcggatttctgagttcaaggcca
gcctggtctacagagtgagttccaggacaaccagggctacacagagaaac
cctgtctccataccccccaaagactatttaacataataagggaaaaatta
gtttgaaaatatgattcaaaaatagaaaatattgcatttatataactgtt
agttggctaggaaacttgagatttaaaggtattttataccagagttcatg
gctacttttcaccagctgagacaagtcttaaagaatgcacatattttatg
gttaatgtcatttctccctttctctgtaccttattgtgtattttagttgt
caaacatatgacaacccttaattattagagtttaattctgtgtaaatgtt
aaaaaaaaaacccacctcattttacttttagctttaaaaaacttttatga
gctggtatgatggctcagtggctaagagcactgactgctcttcagaaggt
cctgagttcaaatcccagcaaccacatggtggctcaacaaccatctgtaa
tgagatctgatgccctcttctggtgtgtgaagacagctacagtgtactta
gatataataaataaatctttttttaaaaagaactaaaaaaagatatttgt
aaaaattaaaaaaaaatttttatgagtgttttgcttggatgtatgtctgt
gtactgcatgcgtgtctggtacacacagaggtcaaagaggggcaccagat
tccctctggaagtgattacagaatggttgtgagctaccacgcagttgctg
ggagtcaaagctaggtctctgacagtgctcttagacactgaacatctctc
atcccctctcttgctttttctttgggtgttggatcaaacccaggctatgg
tgtgctgtggtgtgctgggaagtgtgctgtggtgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_74813047_74814303
seq2: B6Ng01-148D08.b_46_1283 (reverse)

seq1  GCCATGGGTCACCCAGGACAGTGGAGAGAGGAACA-ATGGGTGGGAACAT  49
      |||||||             | |||||| |||||| |||||| |||||||
seq2  GCCATGG-------------GAGGAGAG-GGAACATATGGGT-GGAACAT  35

seq1  GCAGAGCTAGGACTATATCGACCTCTGCTTCCTGG-CCTGATTCCTACCT  98
      |   |||||||||  ||||||||   ||||||||| ||||||||||||||
seq2  GGCAAGCTAGGAC-CTATCGACCCTGGCTTCCTGGCCCTGATTCCTACCT  84

seq1  AGCCTAGAGGTTTCAAACCAGGCTCCCTCAGAGGGTCAGAATGGTGGCCT  148
      ||||||  ||||||||  || |||||||||||||||||||||||||||||
seq2  AGCCTAAGGGTTTCAA--CAAGCTCCCTCAGAGGGTCAGAATGGTGGCCT  132

seq1  GGAAGCCCTAGA-CAGAGATCGGGTTAGAGCTAAGAAAGACATTGAGGTT  197
      ||||| |||||| |||||||||| | |||||||||||||||| ||| |||
seq2  GGAAG-CCTAGACCAGAGATCGGTTAAGAGCTAAGAAAGACAATGA-GTT  180

seq1  GAGAGTTTGTGCTTCATCTCTTCTTTCATTTTTAGTTGAGAAACATTTCC  247
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGAGTTTGTGCTTCATCTCTTCTTTCA-TTTTAGTTGAGAAACATTTCC  229

seq1  TGTTTTCCTGTTCCATGGTGCTCTTAAGAGGAGCAAGACTAGAGGGAGCT  297
      |||||||||||||||| ||||||| |  ||||||||||||||||||||||
seq2  TGTTTTCCTGTTCCAT-GTGCTCTAAGAAGGAGCAAGACTAGAGGGAGCT  278

seq1  AGCTGGGCAAGGTGCCTCCTGAGCCCACCTGGTCTACTGGGCCCTCCTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGCAAGGTGCCTCCTGAGCCCACCTGGTCTACTGGGCCCTCCTGC  328

seq1  CTGGGCTAAATGGATCGCTGCCAGCGTGGGCTCTTGCCTGACAGCCGAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAAATGGATCGCTGCCAGCGTGGGCTCTTGCCTGACAGCCGAGG  378

seq1  GCCATCTCAGAGGGCCCTCCTTTCACCTGCTCCGGG-AACCTAAGGACTG  446
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GCCATCTCAGAGGGCCCTCCTTTCA-CTGCTCCGGGAAACCTAAGGACTG  427

seq1  AATGCCAGAGATCAGTCATCTTTAGTGACCTTTTATCTACCCAGGATGGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAGATCAGTCATCTTTAGTGACCTTTTATCTACCCAGGATGGT  477

seq1  TTCTGTCTGCCAACTGGAGCAAGAGGAAGGAAGGTCAGCGAATTCTTTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTGCCAACTGGAGCAAGAGGAAGGAAGGTCAGCGAATTCTTTTC  527

seq1  TTAGCTCTTAAATGACTAACATTTCAGGAAATCAAAATTCTGAATGGAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTTAAATGACTAACATTTCAGGAAATCAAAATTCTGAATGGAGT  577

seq1  AGAGGACATTTCAATTCATCCTGCCAGTTGTAAATAAGTATTCCAGTATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACATTTCAATTCATCCTGCCAGTTGTAAATAAGTATTCCAGTATG  627

seq1  CAAAGGCCTAGGGACATGTGTGAAGGTGTGCTCCAGGCTTAGGGACAAGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCTAGGGACATGTGTGAAGGTGTGCTCCAGGCTTAGGGACAAGC  677

seq1  TCTTCAAACTCACCATTCCTGTTTGGGGACTCATTGTTTGCGCTTTGTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAACTCACCATTCCTGTTTGGGGACTCATTGTTTGCGCTTTGTTT  727

seq1  TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTCTAGACACAGGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTCTAGACACAGGAA  777

seq1  ATATGTCTTCTGTAAGTTCACACAATTTCTGTCTTTTATAAAATGATGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTTCTGTAAGTTCACACAATTTCTGTCTTTTATAAAATGATGCA  827

seq1  AAAGCCATATGAAATACCCAAATCACATGTATAGAATTCTGTCAAGAGCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATATGAAATACCCAAATCACATGTATAGAATTCTGTCAAGAGCC  877

seq1  TTGGATGTGGCTCAGTGACTCAGTGCTGCCTCAGTGTGCCTGCGGGTCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGTGGCTCAGTGACTCAGTGCTGCCTCAGTGTGCCTGCGGGTCTG  927

seq1  GGTTCAATTCTATAGCACTGCACAACCAACAATAGAACAGCTCATATCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAATTCTATAGCACTGCACAACCAACAATAGAACAGCTCATATCAG  977

seq1  TCTCAGTAGTGTGTATTTATTTAGGTCTTTTCCAGAAGCCAGGCTCATAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAGTGTGTATTTATTTAGGTCTTTTCCAGAAGCCAGGCTCATAC  1027

seq1  AGAGGACCAGATTGCTGAAGGCTGTGATTCCCAATCACGTGCGGAGGAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCAGATTGCTGAAGGCTGTGATTCCCAATCACGTGCGGAGGAAG  1077

seq1  AAAGGTAACATGTAGAAGAAAAAGGGCATAGAGGAAGATGGTGGCCTCTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAACATGTAGAAGAAAAAGGGCATAGAGGAAGATGGTGGCCTCTC  1127

seq1  TCTCACCTAGATAAGTCAAGTGTGGACTCCAGAGCCACCCCTAAGAGGTT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTAGATAAGTCAAGTGTGGACTCCAGAGCCACCCCTAAGAGGTT  1177

seq1  CATGAAAAAGTGAGATTATTCTGCCTGGTTCCATTTGAGTCCAGAGAATG  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAAGTGAGATTATTCTGCCTGGTTCCATTTGAGTCCAGAGAATG  1227

seq1  CAACTGAATTC  1257
      |||||||||||
seq2  CAACTGAATTC  1238

seq1: chr10_74701274_74702371
seq2: B6Ng01-148D08.g_70_1158

seq1  GAATTCTGTGTGATCAGAACTACACATTAAGAGTTTGTGATTTGGTATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTGATCAGAACTACACATTAAGAGTTTGTGATTTGGTATCC  50

seq1  CAGTGTGTATTGACTTTGCCATAACCCAAAGACTGGGATTAAGTTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTATTGACTTTGCCATAACCCAAAGACTGGGATTAAGTTCCCTT  100

seq1  GCACACGAGTTAAAGAAAAGAATATTTAACAGTGGTGGCACATGCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGAGTTAAAGAAAAGAATATTTAACAGTGGTGGCACATGCCTTTA  150

seq1  ATACCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCA  200

seq1  GCCTGGTCTACAGAGTGAGTTCCAGGACAACCAGGGCTACACAGAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAGAGTGAGTTCCAGGACAACCAGGGCTACACAGAGAAAC  250

seq1  CCTGTCTCCATACCCCCCAAAGACTATTTAACATAATAAGGGAAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCATACCCCCCAAAGACTATTTAACATAATAAGGGAAAAATTA  300

seq1  GTTTGAAAATATGATTCAAAAATAGAAAATATTGCATTTATATAACTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAATATGATTCAAAAATAGAAAATATTGCATTTATATAACTGTT  350

seq1  AGTTGGCTAGGAAACTTGAGATTTAAAGGTATTTTATACCAGAGTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTAGGAAACTTGAGATTTAAAGGTATTTTATACCAGAGTTCATG  400

seq1  GCTACTTTTCACCAGCTGAGACAAGTCTTAAAGAATGCACATATTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTTCACCAGCTGAGACAAGTCTTAAAGAATGCACATATTTTATG  450

seq1  GTTAATGTCATTTCTCCCTTTCTCTGTACCTTATTGTGTATTTTAGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTCATTTCTCCCTTTCTCTGTACCTTATTGTGTATTTTAGTTGT  500

seq1  CAAACATATGACAACCCTTAATTATTAGAGTTTAATTCTGTGTAAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATATGACAACCCTTAATTATTAGAGTTTAATTCTGTGTAAATGTT  550

seq1  AAAAAAAAAACCCACCTCATTTTACTTTTAGCTTTAAAAAACTTTTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACCCACCTCATTTTACTTTTAGCTTTAAAAAACTTTTATGA  600

seq1  GCTGGTATGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTCAGAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTATGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTCAGAAGGT  650

seq1  CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAACAACCATCTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAACAACCATCTGTAA  700

seq1  TGAGATCTGATGCCCTCTTCTGGTGTGTGAAGACAGCTACAGTGTACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCTGATGCCCTCTTCTGGTGTGTGAAGACAGCTACAGTGTACTTA  750

seq1  GATATAATAAATAAATCTTTTTTTAAAAAAGAACTAAAAAAAGATATTTG  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GATATAATAAATAAATCTTTTTTT-AAAAAGAACTAAAAAAAGATATTTG  799

seq1  TAAAAATTAAAAAAAAATTTTTATGAGTGTTTTGCTTGAATGTATGTCTG  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAAAATTAAAAAAAAATTTTTATGAGTGTTTTGCTTGGATGTATGTCTG  849

seq1  TGTACTGCATGCGTGTCTGGTACACACAGAGGTCCAAAGAGGGGCACCAG  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTACTGCATGCGTGTCTGGTACACACAGAGGT-CAAAGAGGGGCACCAG  898

seq1  AT--CCCCTGGAAGTGGAATCACAG-ATGGTTGTGAGCTACCACGCAGTT  947
      ||  || |||||||||  || |||| ||||||||||||||||||||||||
seq2  ATTCCCTCTGGAAGTG--ATTACAGAATGGTTGTGAGCTACCACGCAGTT  946

seq1  GCTGGGAGTCAAAGCTAGGTCCTCTGACAGTGCTCTTAGACACTGAACCA  997
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  GCTGGGAGTCAAAGCTAGGT-CTCTGACAGTGCTCTTAGACACTGAA-CA  994

seq1  TCTCTCCATCCCCCTCTCTTGCTTTTTCTTTGGGTGTTGGGATCAAACCC  1047
      ||||| ||| |||||||||||||||||||||||||||| |||||||||||
seq2  TCTCT-CAT-CCCCTCTCTTGCTTTTTCTTTGGGTGTT-GGATCAAACCC  1041

seq1  AGGGCTATGGGTGTGCTGTGGGTGTGCTGTG-AGTGTGCTGTGGGTGTGT  1096
      | |||||| |||||||||| ||||||||| | |||||||||| |||||||
seq2  A-GGCTAT-GGTGTGCTGT-GGTGTGCTGGGAAGTGTGCTGT-GGTGTGT  1087

seq1  TG  1098
      ||
seq2  TG  1089