BAC Information

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BAC

Clone NameB6Ng01-148K23
Chromosome10 (Build37)
Map Location 63,653,228 - 63,785,162
singlet/doubletdoublet
Overlap geneCtnna3
Upstream geneMypn, 1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906, Lrrtm3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148K23.bB6Ng01-148K23.g
ACCDH945223DH945224
length1,0551,085
definitionDH945223|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K23, 5' end.DH945224|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,784,109 - 63,785,162)(63,653,228 - 63,654,311)
sequence
gaattctaggcaggtctgagccacctgatatgggtgctggaaactgaact
caagtctgcttcaaaagtagtgttttcttaaccactaagcaacctctcaa
ctcccaataaagaactttaagatatttttattgggtattgaagaattgat
gatgttcaagctagtagatgcctgaagccttaacatataataacctaggt
agcataacatgcctcctaatggtaccccagggcacatcagcctctgttta
tataataaggaatctatgtcttccatggaaacacattctacttagggaca
aattccttttatgtaaagaaacaattgtgaaatggcccatgcactttggt
tttcttttattcattgtctattacaagtgttttgttctttcccaaatgca
gttagccttgcacttacttacttacatagcacttcaaaaagaaaaaaagg
tggcaaattgtggcttctaagtgtcagataatctaggtcctttgatcagg
aggggattgtcacagggacttgcatgtgccttggtaggggctccttctcc
ttcagatcaaactcaagaagacagaaaaacaacagcaaagactttatatg
gatatgggccaaccttgaacatagtaataagtttcaggcagagcctatgg
actgtgtgtctgcatgtcagtgtggcccaggaacagactcccatctgcca
gaggagatctaaaatagtttagagatgtcaccaggaacaagtgctgactt
ggcagttggtagctaatgattggaaaggagaatgactctcaggaaatgtc
agatgagatggaaggttaggggtccctgccccttggtgatctaaaggttt
catggattactgaaccaaaaattaatagcagaaagagccactcttaatta
cttattatatttacctattttaaattatgcatttgtgtgtatatgtatga
gtgtgtgtgcctgtgcagctcagagggccaacttgccagttggtgtccct
cactgtcccctgtgtgggttccagagtttaactgtaggtcatcaacctca
gcaat
gaattcaaacagggcagagacttggaggcaggagctgatgcagaggccat
ggagtggcactgtttagtagtttacttcccatggcttggccccacctacc
gtgggctgagccttctcccatcaatcactaattaagacaatcctctacag
gctgcctgtggcctgatcttatggaggccttttttttttttttttttttt
tttaaactgagtgtccctcctttcatatggcttcagcctgtgtcaagatg
acataaatctaccctgcacaggtactacggaaggaagtgattggaacaac
tgaaacccagagaacaagttactactccttttggcttgggggaatcagaa
aagttttcatagatcagactcgtttggcttcgtctggtttctcatttcct
tctgaaaaacctgtgctgactctgctatccaattaccaagagaaagttaa
gattttgctgccttgcatgtgagctcacatgcttttccgaaataaattgt
gtttatgtaataatttttaccttttcgcctcgctcatcacttccatctga
tattactttgaattatatgaattataccaccccccctacaacagcctccg
attgagctgagtgttcacatttctggtacaagctaatagaatttttcatc
tgcgtttggtgtgcagatgttgaacacatggctcttaagggatggcatta
ttcttagggaggatgacagtcttcaaacatttttgattagcacctcaatt
tcaccccacttctgcatctttgaagtgagcctgtgtttttatatcctcct
agctccgtcttttacaaagctctttttcttcaggaaaggcaatttttggt
cctcagttttctatctaccgaactgttgcaaggctttcagagagatttga
tagcttttagtttcagaaattgaattttttcttaattctgcaagagcctc
aaagggaatacatcttgcatcagaaaaaatatgacttaagatctttgcca
atagcttgcggggtgtggtactttataggtcggaaaataataacttggac
tacctcgaaatgccattggagaaccaaggaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_63784109_63785162
seq2: B6Ng01-148K23.b_51_1105 (reverse)

seq1  ATTGCTGAGGTTGATGACCT-CAGTTTAAACTCTGGAACCCACACAGGGG  49
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  ATTGCTGAGGTTGATGACCTACAG-TTAAACTCTGGAACCCACACAGGGG  49

seq1  ACAGTGAGGGACACC-ACTTGCAAGTT-GCCCTCTGAGCTGCACAGGCAC  97
      ||||||||||||||| ||| ||||||| ||||||||||||||||||||||
seq2  ACAGTGAGGGACACCAACTGGCAAGTTGGCCCTCTGAGCTGCACAGGCAC  99

seq1  ACACACTCATACATATACACACAAATGCATAATTTAAAAATAGGTAAATA  147
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACACACTCATACATATACACACAAATGCATAATTT-AAAATAGGTAAATA  148

seq1  TATTAAGTAATTAAGAGTGGCTCTTTCTGCTATTAATTTTTGGTTCAGTA  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTAATTAAGAGTGGCTCTTTCTGCTATTAATTTTTGGTTCAGTA  198

seq1  ATCCATGAAACCTTTAGATCACCAAGGGGCAGGGACCCCTAACCTTCCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAAACCTTTAGATCACCAAGGGGCAGGGACCCCTAACCTTCCAT  248

seq1  CTCATCTGACATTTCCTGAGAGTCATTCTCCTTTCCAATCATTAGCTACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGACATTTCCTGAGAGTCATTCTCCTTTCCAATCATTAGCTACC  298

seq1  AACTGCCAAGTCAGCACTTGTTCCTGGTGACATCTCTAAACTATTTTAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCAAGTCAGCACTTGTTCCTGGTGACATCTCTAAACTATTTTAGA  348

seq1  TCTCCTCTGGCAGATGGGAGTCTGTTCCTGGGCCACACTGACATGCAGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTGGCAGATGGGAGTCTGTTCCTGGGCCACACTGACATGCAGAC  398

seq1  ACACAGTCCATAGGCTCTGCCTGAAACTTATTACTATGTTCAAGGTTGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCCATAGGCTCTGCCTGAAACTTATTACTATGTTCAAGGTTGGC  448

seq1  CCATATCCATATAAAGTCTTTGCTGTTGTTTTTCTGTCTTCTTGAGTTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCATATAAAGTCTTTGCTGTTGTTTTTCTGTCTTCTTGAGTTTG  498

seq1  ATCTGAAGGAGAAGGAGCCCCTACCAAGGCACATGCAAGTCCCTGTGACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGGAGAAGGAGCCCCTACCAAGGCACATGCAAGTCCCTGTGACA  548

seq1  ATCCCCTCCTGATCAAAGGACCTAGATTATCTGACACTTAGAAGCCACAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTCCTGATCAAAGGACCTAGATTATCTGACACTTAGAAGCCACAA  598

seq1  TTTGCCACCTTTTTTTCTTTTTGAAGTGCTATGTAAGTAAGTAAGTGCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACCTTTTTTTCTTTTTGAAGTGCTATGTAAGTAAGTAAGTGCAA  648

seq1  GGCTAACTGCATTTGGGAAAGAACAAAACACTTGTAATAGACAATGAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACTGCATTTGGGAAAGAACAAAACACTTGTAATAGACAATGAATA  698

seq1  AAAGAAAACCAAAGTGCATGGGCCATTTCACAATTGTTTCTTTACATAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACCAAAGTGCATGGGCCATTTCACAATTGTTTCTTTACATAAA  748

seq1  AGGAATTTGTCCCTAAGTAGAATGTGTTTCCATGGAAGACATAGATTCCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTGTCCCTAAGTAGAATGTGTTTCCATGGAAGACATAGATTCCT  798

seq1  TATTATATAAACAGAGGCTGATGTGCCCTGGGGTACCATTAGGAGGCATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATAAACAGAGGCTGATGTGCCCTGGGGTACCATTAGGAGGCATG  848

seq1  TTATGCTACCTAGGTTATTATATGTTAAGGCTTCAGGCATCTACTAGCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTACCTAGGTTATTATATGTTAAGGCTTCAGGCATCTACTAGCTT  898

seq1  GAACATCATCAATTCTTCAATACCCAATAAAAATATCTTAAAGTTCTTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCATCAATTCTTCAATACCCAATAAAAATATCTTAAAGTTCTTTA  948

seq1  TTGGGAGTTGAGAGGTTGCTTAGTGGTTAAGAAAACACTACTTTTGAAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTTGAGAGGTTGCTTAGTGGTTAAGAAAACACTACTTTTGAAGC  998

seq1  AGACTTGAGTTCAGTTTCCAGCACCCATATCAGGTGGCTCAGACCTGCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAGTTCAGTTTCCAGCACCCATATCAGGTGGCTCAGACCTGCCT  1048

seq1  AGAATTC  1054
      |||||||
seq2  AGAATTC  1055

seq1: chr10_63653228_63654311
seq2: B6Ng01-148K23.g_67_1151

seq1  GAATTCAAACAGGGCAGAGACTTGGAGGCAGGAGCTGATGCAGAGGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGGGCAGAGACTTGGAGGCAGGAGCTGATGCAGAGGCCAT  50

seq1  GGAGTGGCACTGTTTAGTAGTTTACTTCCCATGGCTTGGCCCCACCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCACTGTTTAGTAGTTTACTTCCCATGGCTTGGCCCCACCTACC  100

seq1  GTGGGCTGAGCCTTCTCCCATCAATCACTAATTAAGACAATCCTCTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTGAGCCTTCTCCCATCAATCACTAATTAAGACAATCCTCTACAG  150

seq1  GCTGCCTGTGGCCTGATCTTATGGAGGCCTTTTTTTTTTTTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGTGGCCTGATCTTATGGAGGCCTTTTTTTTTTTTTTTTTTTTT  200

seq1  TTTAAACTGAGTGTCCCTCCTTTCATATGGCTTCAGCCTGTGTCAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTGAGTGTCCCTCCTTTCATATGGCTTCAGCCTGTGTCAAGATG  250

seq1  ACATAAATCTACCCTGCACAGGTACTACGGAAGGAAGTGATTGGAACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATCTACCCTGCACAGGTACTACGGAAGGAAGTGATTGGAACAAC  300

seq1  TGAAACCCAGAGAACAAGTTACTACTCCTTTTGGCTTGGGGGAATCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCAGAGAACAAGTTACTACTCCTTTTGGCTTGGGGGAATCAGAA  350

seq1  AAGTTTTCATAGATCAGACTCGTTTGGCTTCGTCTGGTTTCTCATTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCATAGATCAGACTCGTTTGGCTTCGTCTGGTTTCTCATTTCCT  400

seq1  TCTGAAAAACCTGTGCTGACTCTGCTATCCAATTACCAAGAGAAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAACCTGTGCTGACTCTGCTATCCAATTACCAAGAGAAAGTTAA  450

seq1  GATTTTGCTGCCTTGCATGTGAGCTCACATGCTTTTCCGAAATAAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGCTGCCTTGCATGTGAGCTCACATGCTTTTCCGAAATAAATTGT  500

seq1  GTTTATGTAATAATTTTTACCTTTTCGCCTCGCTCATCACTTCCATCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTAATAATTTTTACCTTTTCGCCTCGCTCATCACTTCCATCTGA  550

seq1  TATTACTTTGAATTATATGAATTATACCACCCCCCCTACAACAGCCTCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTTGAATTATATGAATTATACCACCCCCCCTACAACAGCCTCCG  600

seq1  ATTGAGCTGAGTGTTCACATTTCTGGTACAAGCTAATAGAATTTTTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCTGAGTGTTCACATTTCTGGTACAAGCTAATAGAATTTTTCATC  650

seq1  TGCGTTTGGTGTGCAGATGTTGAACACATGGCTCTTAA-GGATGGCATTA  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCGTTTGGTGTGCAGATGTTGAACACATGGCTCTTAAGGGATGGCATTA  700

seq1  TTCTTA-GGAGGATGACAGTCTTCAAACA-TTTTGATTAGCACCTCAATT  747
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTTAGGGAGGATGACAGTCTTCAAACATTTTTGATTAGCACCTCAATT  750

seq1  TCA-CCCACTTCTGCATC-TTGAAGTGAGCCTGTGTTTTTATATCCTCCT  795
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCACCCCACTTCTGCATCTTTGAAGTGAGCCTGTGTTTTTATATCCTCCT  800

seq1  AGCTCCGTCTTTTACAAAGCTC-TATTCTTCAGG-AAGGCAATTTTTGGT  843
      |||||||||||||||||||||| | ||||||||| |||||||||||||||
seq2  AGCTCCGTCTTTTACAAAGCTCTTTTTCTTCAGGAAAGGCAATTTTTGGT  850

seq1  CCTCAGTTTTCTATCTACCGAACTGTTGCAAGGCTTTCAGAGAGATTTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTTTTCTATCTACCGAACTGTTGCAAGGCTTTCAGAGAGATTTGA  900

seq1  TAGCTTTTAGTTTCAGAAATTGAATATTTTACTTAATTCTGCAAAGAG-C  942
      ||||||||||||||||||||||||| |||| ||||||||||| ||||| |
seq2  TAGCTTTTAGTTTCAGAAATTGAAT-TTTTTCTTAATTCTGC-AAGAGCC  948

seq1  TCAAA-GGAATACATC-TGCATCAGGAAAAAATATGACTT-AGATCTTTG  989
      ||||| |||||||||| ||||||| ||||||||||||||| |||||||||
seq2  TCAAAGGGAATACATCTTGCATCA-GAAAAAATATGACTTAAGATCTTTG  997

seq1  -CAATAGCTTGCCGGTGTGTGGTACTTTATAGTTCGTGAAATATATTACC  1038
       |||||||||| ||| |||||||||||||||| ||| |||| ||| || |
seq2  CCAATAGCTTG-CGGGGTGTGGTACTTTATAGGTCG-GAAA-ATAATAAC  1044

seq1  TTTGTGACTTAACCCTCGAAATGCCATTGGAGACCCAAGGAAACTG  1084
      ||   ||||    |||||||||||||||||||| ||||||||||||
seq2  TT--GGACT---ACCTCGAAATGCCATTGGAGAACCAAGGAAACTG  1085