BAC Information

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BAC

Clone NameB6Ng01-148M01
Chromosome10 (Build37)
Map Location 115,663,393 - 115,808,871
singlet/doubletdoublet
Overlap genePtprr, Ptprb
Upstream geneTbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071, EG668073, Tspan8, 4933416C03Rik
Downstream geneKcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741, Best3, Lrrc10, Cct2, Frs2, Yeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M01.bB6Ng01-148M01.g
ACCDH945273DH945274
length1,136889
definitionDH945273|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M01, 5' end.DH945274|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,807,733 - 115,808,871)(115,663,393 - 115,664,281)
sequence
gaattcattcttgttcttgtttggcccagacaaaactaaagctgggagta
cagaaaggggaacactcaatcccgtctgccctcttgtcataagggcttcc
tacagccctgcaagaaattcctcatcctccctccacaaccagcttctcta
cgcatgcgcatgatttctgaacaaaagttatctttagcattgacactata
gcagtctcagtaagctgcttttcccaggatgcttgccaagctaaggccag
tgatggtgcctctgcctgtgagcaaacaccaaagccttgtgacaaagtag
catatgtaaatttccccacttttgtcttaaaactcagctttgactctatc
atcatttactgtggcacctatacccaccagagtcctttactacccctaaa
taagtatcattattcttggtagacactccctccagttattttggctggca
atgaacacatttataagatacagaacaattctccagtgtttcctggaaga
aaatgccagccattcttcagaaagcaggagccgagtgagtgtttcatatg
cgcattaagaccctggggtttgaagacatataaaacaggctcctagggtg
tggggccgcaggggagaaactaacacacttgacatttcttttactgtggc
gattctctgctccttatttattagtgccattcagtgagggctatcaaaat
gttctgcacacattaattagctaaacaccaggctccccagagagagaaag
atggcttgttaagttggatttatggacagatgaactaaagcaaagaaaag
tcaagagagagagagagaaagaaatttaagagcaaaaactggctacagac
agctggagtgagtttgcttggtccctttgcctgtctcttgcctgccttct
tccatgtgaggatacaactttctcttctctggagggcacacgtggcttct
gaaaccatgttcttataaggcacctatttgtctgtggcttggtcttgaag
cttcgaattcgaattttgaaatgtaaatttccgttgtttgtaagtactgg
gtctgcagtattttgttatagcatcaccagttgaaacaaaacatgctact
agcctgatgggagctaaggcagggagcttgaaagat
gaattcatggtgagcccgctccttcttacttgcagtgccttaggagactg
gagcagagagagacatttctagattaggaatcagcctttctgtgatcatg
gggaatcgaattgttctggtttactggaaagtagcaaaacttgagcctca
gaaacacaaaaaagaaaaacgacaaaaccacagactttaatagatgttta
agaatgggttttaagcttactttagaaaagccactgtgtctgcagtggag
aaggcactgagaggagcagattggaggctcaagagccaatgctatggaaa
ccagaacccagaaggtatcaacaataaaatactctgggagaaactgagac
aatgtgtaacactaaacaaaacattggtttctttggatgaggcagccaaa
gtgatggagaagtttcaggtggtattctgaatgctttttcttttgttttg
gttttggtttggtttggttttcatttttaatttgggcaatacaattcaag
aaagaccaaatatgggctaaaaataataatgaatactatatgaagttatc
ttagaaaaatcaatattgcatcactttgcatgccatcaatattgcatggt
aagttattacacacagagaataacgttggagtttgaagttctagatattg
cctgaggggaatactcactttttttaatggctttacatcagagttacaca
gcttaagctatagtgatcaaatataataaatagatggttctgtgggcagt
tccgatatttggcaccagaccagtggagaatgatcagtagtgttagactc
cctgttagagacaccactatcatcaaccttttgaaacaagataccaatct
tggagtttgcaaatgagatgcctaatgtgtcacattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_115807733_115808871
seq2: B6Ng01-148M01.b_44_1179 (reverse)

seq1  ATCTTTCAAGCTCCCTGCCCTAGACTTCCATCCAGGCCTAGTAGCATG-T  49
      ||||||||||||||||||| ||| || |||| |||| ||||||||||| |
seq2  ATCTTTCAAGCTCCCTGCCTTAG-CTCCCAT-CAGG-CTAGTAGCATGTT  47

seq1  TTGTGTCCACTGGTGATGCTATAACAAAATACTGCAGACCCAGTAACTTA  99
      |||| || |||||||||||||||||||||||||||||||||||| |||||
seq2  TTGTTTCAACTGGTGATGCTATAACAAAATACTGCAGACCCAGT-ACTTA  96

seq1  CAAACAACGGAAATTTACATTTCAAAATTCGAATTCGAAGCTTCAAGACC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACGGAAATTTACATTTCAAAATTCGAATTCGAAGCTTCAAGACC  146

seq1  AAGCCACAGACAAATAGGTGCCTTATAAGAACATGGTTTCAGAAGCCACG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGACAAATAGGTGCCTTATAAGAACATGGTTTCAGAAGCCACG  196

seq1  TGTGCCCTCCAGAGAAGAGAAAGTTGTATCCTCACATGGAAGAAGGCAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTCCAGAGAAGAGAAAGTTGTATCCTCACATGGAAGAAGGCAGG  246

seq1  CAAGAGACAGGCAAAGGGACCAAGCAAACTCACTCCAGCTGTCTGTAGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACAGGCAAAGGGACCAAGCAAACTCACTCCAGCTGTCTGTAGCC  296

seq1  AGTTTTTGCTCTTAAATTTCTTTCTCTCTCTCTCTCTTGACTTTTCTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGCTCTTAAATTTCTTTCTCTCTCTCTCTCTTGACTTTTCTTTG  346

seq1  CTTTAGTTCATCTGTCCATAAATCCAACTTAACAAGCCATCTTTCTCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTCATCTGTCCATAAATCCAACTTAACAAGCCATCTTTCTCTCT  396

seq1  CTGGGGAGCCTGGTGTTTAGCTAATTAATGTGTGCAGAACATTTTGATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGCCTGGTGTTTAGCTAATTAATGTGTGCAGAACATTTTGATAG  446

seq1  CCCTCACTGAATGGCACTAATAAATAAGGAGCAGAGAATCGCCACAGTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTGAATGGCACTAATAAATAAGGAGCAGAGAATCGCCACAGTAA  496

seq1  AAGAAATGTCAAGTGTGTTAGTTTCTCCCCTGCGGCCCCACACCCTAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTCAAGTGTGTTAGTTTCTCCCCTGCGGCCCCACACCCTAGGA  546

seq1  GCCTGTTTTATATGTCTTCAAACCCCAGGGTCTTAATGCGCATATGAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTTATATGTCTTCAAACCCCAGGGTCTTAATGCGCATATGAAAC  596

seq1  ACTCACTCGGCTCCTGCTTTCTGAAGAATGGCTGGCATTTTCTTCCAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCGGCTCCTGCTTTCTGAAGAATGGCTGGCATTTTCTTCCAGGA  646

seq1  AACACTGGAGAATTGTTCTGTATCTTATAAATGTGTTCATTGCCAGCCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGAGAATTGTTCTGTATCTTATAAATGTGTTCATTGCCAGCCAA  696

seq1  AATAACTGGAGGGAGTGTCTACCAAGAATAATGATACTTATTTAGGGGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGGAGGGAGTGTCTACCAAGAATAATGATACTTATTTAGGGGTA  746

seq1  GTAAAGGACTCTGGTGGGTATAGGTGCCACAGTAAATGATGATAGAGTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGACTCTGGTGGGTATAGGTGCCACAGTAAATGATGATAGAGTCA  796

seq1  AAGCTGAGTTTTAAGACAAAAGTGGGGAAATTTACATATGCTACTTTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGTTTTAAGACAAAAGTGGGGAAATTTACATATGCTACTTTGTC  846

seq1  ACAAGGCTTTGGTGTTTGCTCACAGGCAGAGGCACCATCACTGGCCTTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCTTTGGTGTTTGCTCACAGGCAGAGGCACCATCACTGGCCTTAG  896

seq1  CTTGGCAAGCATCCTGGGAAAAGCAGCTTACTGAGACTGCTATAGTGTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAAGCATCCTGGGAAAAGCAGCTTACTGAGACTGCTATAGTGTCA  946

seq1  ATGCTAAAGATAACTTTTGTTCAGAAATCATGCGCATGCGTAGAGAAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAGATAACTTTTGTTCAGAAATCATGCGCATGCGTAGAGAAGCT  996

seq1  GGTTGTGGAGGGAGGATGAGGAATTTCTTGCAGGGCTGTAGGAAGCCCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGGAGGGAGGATGAGGAATTTCTTGCAGGGCTGTAGGAAGCCCTT  1046

seq1  ATGACAAGAGGGCAGACGGGATTGAGTGTTCCCCTTTCTGTACTCCCAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGAGGGCAGACGGGATTGAGTGTTCCCCTTTCTGTACTCCCAGC  1096

seq1  TTTAGTTTTGTCTGGGCCAAACAAGAACAAGAATGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTGTCTGGGCCAAACAAGAACAAGAATGAATTC  1136

seq1: chr10_115663393_115664281
seq2: B6Ng01-148M01.g_70_958

seq1  GAATTCATGGTGAGCCCGCTCCTTCTTACTTGCAGTGCCTTAGGAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTGAGCCCGCTCCTTCTTACTTGCAGTGCCTTAGGAGACTG  50

seq1  GAGCAGAGAGAGACATTTCTAGATTAGGAATCAGCCTTTCTGTGATCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGAGAGACATTTCTAGATTAGGAATCAGCCTTTCTGTGATCATG  100

seq1  GGGAATCGAATTGTTCTGGTTTACTGGAAAGTAGCAAAACTTGAGCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCGAATTGTTCTGGTTTACTGGAAAGTAGCAAAACTTGAGCCTCA  150

seq1  GAAACACAAAAAAGAAAAACGACAAAACCACAGACTTTAATAGATGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAAAAAAGAAAAACGACAAAACCACAGACTTTAATAGATGTTTA  200

seq1  AGAATGGGTTTTAAGCTTACTTTAGAAAAGCCACTGTGTCTGCAGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGTTTTAAGCTTACTTTAGAAAAGCCACTGTGTCTGCAGTGGAG  250

seq1  AAGGCACTGAGAGGAGCAGATTGGAGGCTCAAGAGCCAATGCTATGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTGAGAGGAGCAGATTGGAGGCTCAAGAGCCAATGCTATGGAAA  300

seq1  CCAGAACCCAGAAGGTATCAACAATAAAATACTCTGGGAGAAACTGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCCAGAAGGTATCAACAATAAAATACTCTGGGAGAAACTGAGAC  350

seq1  AATGTGTAACACTAAACAAAACATTGGTTTCTTTGGATGAGGCAGCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTAACACTAAACAAAACATTGGTTTCTTTGGATGAGGCAGCCAAA  400

seq1  GTGATGGAGAAGTTTCAGGTGGTATTCTGAATGCTTTTTCTTTTGTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGAGAAGTTTCAGGTGGTATTCTGAATGCTTTTTCTTTTGTTTTG  450

seq1  GTTTTGGTTTGGTTTGGTTTTCATTTTTAATTTGGGCAATACAATTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTTGGTTTGGTTTTCATTTTTAATTTGGGCAATACAATTCAAG  500

seq1  AAAGACCAAATATGGGCTAAAAATAATAATGAATACTATATGAAGTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCAAATATGGGCTAAAAATAATAATGAATACTATATGAAGTTATC  550

seq1  TTAGAAAAATCAATATTGCATCACTTTGCATGCCATCAATATTGCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAATCAATATTGCATCACTTTGCATGCCATCAATATTGCATGGT  600

seq1  AAGTTATTACACACAGAGAATAACGTTGGAG-TTGAAGTTCTAGATATTG  649
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTTATTACACACAGAGAATAACGTTGGAGTTTGAAGTTCTAGATATTG  650

seq1  CCTGAGGGGAATACTCAC-TTTTTTAATGGCTTTACATCAGAGTTACACA  698
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTGAGGGGAATACTCACTTTTTTTAATGGCTTTACATCAGAGTTACACA  700

seq1  GCTTAAGCTATAGTGATCAAATATAATAAATAGATGGTTCTGTGGGCAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGCTATAGTGATCAAATATAATAAATAGATGGTTCTGTGGGCAGT  750

seq1  TCCGATATTTGGCACCAGACCAGTGGAGAATGATCAGTAGTGTTAGACTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATATTTGGCACCAGACCAGTGGAGAATGATCAGTAGTGTTAGACTC  800

seq1  CCTGTTAGAGACACCAACTATCATCAACCTTTTGAAGCAAGATACCAA-C  847
      ||||||||||||||| |||||||||||||||||||| ||||||||||| |
seq2  CCTGTTAGAGACACC-ACTATCATCAACCTTTTGAAACAAGATACCAATC  849

seq1  ATGGAGTTTGTAAAATGAGATGCCATAGTGTGTCACATTTTT  889
       |||||||||  |||||||||||| || ||||||||||||||
seq2  TTGGAGTTTG-CAAATGAGATGCC-TAATGTGTCACATTTTT  889