BAC Information

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BAC

Clone NameB6Ng01-149F15
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,993 - 104,054,36398,463,632 - 98,464,126
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149F15.bB6Ng01-149F15.g
ACCDH945713DH945714
length365489
definitionDH945713|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F15, 5' end.DH945714|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,993 - 104,054,363)(98,463,632 - 98,464,126)
sequence
tcacctgaggaatactgaatggctgagaagcacctgaaaaaacgttaagc
atccttaatcatcagagaaatgcaaatcaaaacaaccctgagattccatc
tcacaccagtcagaagggctaagatcaaaaattcaggtgacagcagatgt
tggcgaggatgtggagaaagaggaacactcctccattgttggtgggactg
caagcttgtacaaccactctggaaatcagtctggtggttcctctgaaaat
tggatatagtactactagaggatcctgcaatacctctcctgggcatatat
ccagaagatgtcccaacgggtgagaaggacacatgctccactatgttcat
agcagccttatttat
actcctactgttctctccctctcagaccccaccccctccactctgtccat
ttctctgtctctctgtctgcctgactttctgtttttctgtctctctctgt
atctctctctgtgtgtctttgtccccctctttctctccctcccttcttcc
ctttctctccctccctaccctgccctgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgagacacatgtgtatttatctttaggaatttgttgtgttctgta
tgcagagaatttaccttattttttctgccacattgcagccattgccctgg
aagcttgtttgggggaagagatgatggggtttaatgtgctcactcagtgg
gttagatactttccaaatatttttatcatttcttccgattctactgcact
attccaaatctattatttaatcataatagatatgtgtaataataaattat
ttacacataatagatacacatatttttacaacccatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053993_104054363
seq2: B6Ng01-149F15.b_50_420 (reverse)

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  50
      |||||||||||||||||||| |||||||||||||||||||||| ||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTCACCCGT  50

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  100
      |||| |||||||||||||||||||||| ||||||||||| ||||||||  
seq2  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCAGGATCCTCTA  100

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  150
      |||||||||| |||||||||| || ||||| |||||| ||||||||||||
seq2  GTAGTACTATATCCAATTTTCAGAGGAACCACCAGACTGATTTCCAGAGT  150

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  200
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAGTCCCACCAACAATGGAGGAGTGTTCCTCTTTC  200

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TCCACATCCTCGCCAACATCTGCTGTCACCTGAATTTTTGATCTTAGCCC  250

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  300
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  TTCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCT  300

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  350
      |||||||||||||||| | ||| |||||||||||||||||| ||||||| 
seq2  CTGATGATTAAGGATGCTTAACGTTTTTTCAGGTGCTTCTCAGCCATTCA  350

seq1  GTATTCCTCAGGTGAGAATTC  371
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  371

seq1: chr1_98463632_98464126
seq2: B6Ng01-149F15.g_68_562

seq1  GAATTCACTCCTACTGTTCTCTCCCTCTCAGACCCCACCCCCTCCACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCTACTGTTCTCTCCCTCTCAGACCCCACCCCCTCCACTCT  50

seq1  GTCCATTTCTCTGTCTCTCTGTCTGCCTGACTTTCTGTTTTTCTGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTCTCTGTCTCTCTGTCTGCCTGACTTTCTGTTTTTCTGTCTCT  100

seq1  CTCTGTATCTCTCTCTGTGTGTCTTTGTCCCCCTCTTTCTCTCCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATCTCTCTCTGTGTGTCTTTGTCCCCCTCTTTCTCTCCCTCCCT  150

seq1  TCTTCCCTTTCTCTCCCTCCCTACCCTGCCCTGTGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTTTCTCTCCCTCCCTACCCTGCCCTGTGTGTGTGTGTGTGTGT  200

seq1  GTGTGTGTGTGTGAGACACATGTGTATTTATCTTTAGGAATTTGTTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGAGACACATGTGTATTTATCTTTAGGAATTTGTTGTGT  250

seq1  TCTGTATGCAGAGAATTTACCTTATTTTTTCTGCCACATTGCAGCCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATGCAGAGAATTTACCTTATTTTTTCTGCCACATTGCAGCCATTG  300

seq1  CCCTGGAAGCTTGTTTGGGGGAAGAGATGATGGGGTTTAATGTGCTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAGCTTGTTTGGGGGAAGAGATGATGGGGTTTAATGTGCTCACT  350

seq1  CAGTGGGTTAGATACTTTCCAAATATTTTTATCATTTCTTCCGATTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTTAGATACTTTCCAAATATTTTTATCATTTCTTCCGATTCTAC  400

seq1  TGCACTATTCCAAATCTATTATTTAATCATAATAGATATGTGTAATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTATTCCAAATCTATTATTTAATCATAATAGATATGTGTAATAATA  450

seq1  AATTATTTACACATAATAGATACACATATTTTTACAACCCATATA  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTACACATAATAGATACACATATTTTTACAACCCATATA  495