BAC Information

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BAC

Clone NameB6Ng01-149N24
Chromosome10 (Build37)
Map Location 110,112,089 - 110,113,010
singlet/doubletsinglet
Overlap geneLOC100042518
Upstream geneNav3, LOC100042497, LOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik
Downstream geneE2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149N24.bB6Ng01-149N24.g
ACCDH946094DH946095
length925771
definitionDH946094|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N24, 5' end.DH946095|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggaaggtggaaaaaaaaaacagaaaatgttatgatatctat
tgttgcataaaaggtcagtgtgatatgagccaacaaatatttaatgatgt
tataaatagtatacggtgggtcaggagttcaaaaagacacacatataaac
ctacacatcacatctgtgagtgcacgcgcacacacacacacacacacaca
cttacttattggagtggattggatatcataactatggaagttgactaggc
aagtctgatatggttgcatggttgtttgtctgcccaacaagaaggctgct
attgggtgcaggcactatgctctgtaagtgggattccttcttcctcaggg
aaggtagagcctttgttttaggaggcatttgacataaaggtgcataattc
ctaattgacaagtgaagctcattagcagaaaaatgcaagtcattagaaat
tgcaggtggccaagcagataagcagcctgagaggcaggctaatgcacatg
cgactgacctcatgacatgatcatgataccatgtgtggtgacagttcaca
gtggtttagggtcagattttggaggaaaactgacaagagcaagtggtggt
ggggagacatattattttatagaaactatgtatctgagtagtttgatgaa
gtaggtactgatgttagctggggaaagtgagtgacttgtagggtatgaga
gtatagatgtcggccagaaatttctggttgctgcaccatacactgcaggt
agaggcaagaggctagagagtgtgtaccaaatataacacgtaggctgcta
tgccctttgctattgctgggctacaagctgaaggtgacttggatgaaaac
ctttatttcttatttttcacttatttaagtacactgatctaagctgacta
tctatttctcattgtgtgtgagggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctatccaa
atggatggacctggagagcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaaatgaagactgaagtgtggacactatgccccttccttagaagtggg
aacaaaacacccatgggaaggagttacagaaacaaagtttgggagctgag
atgaaaggatggaccatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110112089_110113010
seq2: B6Ng01-149N24.b_48_972 (reverse)

seq1  CCCCTCACACACAATGAGAATTAGATAGTCAGCTTAGATCAGTGTACTTA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCCTCACACACAATGAGAAATAGATAGTCAGCTTAGATCAGTGTACTTA  50

seq1  AAT-AGTGAAAAATAAG-AATAAAGGTTTTCATCCAAGTCACCTTCAGCT  98
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATAAGTGAAAAATAAGAAATAAAGGTTTTCATCCAAGTCACCTTCAGCT  100

seq1  TGTAGCCCAGCAATAGCAAAGGGCATAGCAGCCTACGTGTTATATTTGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCAGCAATAGCAAAGGGCATAGCAGCCTACGTGTTATATTTGGT  150

seq1  ACACACTCTCTAGCCTCTTGCCTCTACCTGCAGTGTATGGTGCAGCAACC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCTCTAGCCTCTTGCCTCTACCTGCAGTGTATGGTGCAGCAACC  200

seq1  AG-AATTTCTGGCCGACATCTATACTCTCATACCCTACAAGTCACTCACT  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTCTGGCCGACATCTATACTCTCATACCCTACAAGTCACTCACT  250

seq1  TTCCCCAGCTAACATCAGTACCTACTTCATCAAACTACTCAGATACATAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCTAACATCAGTACCTACTTCATCAAACTACTCAGATACATAG  300

seq1  TTTCTATAAAATAATATGTCTCCCCACCACCACTTGCTCTTGTCAGTTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAAAATAATATGTCTCCCCACCACCACTTGCTCTTGTCAGTTTT  350

seq1  CCTCCAAAATCTGACCCTAAACCACTGTGAACTGTCACCACACATGGTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAAATCTGACCCTAAACCACTGTGAACTGTCACCACACATGGTAT  400

seq1  CATGATCATGTCATGAGGTCAGTCGCATGTGCATTAGCCTGCCTCTCAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCATGTCATGAGGTCAGTCGCATGTGCATTAGCCTGCCTCTCAGG  450

seq1  CTGCTTATCTGCTTGGCCACCTGCAATTTCTAATGACTTGCATTTTTCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTATCTGCTTGGCCACCTGCAATTTCTAATGACTTGCATTTTTCTG  500

seq1  CTAATGAGCTTCACTTGTCAATTAGGAATTATGCACCTTTATGTCAAATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGCTTCACTTGTCAATTAGGAATTATGCACCTTTATGTCAAATG  550

seq1  CCTCCTAAAACAAAGGCTCTACCTTCCCTGAGGAAGAAGGAATCCCACTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAAAACAAAGGCTCTACCTTCCCTGAGGAAGAAGGAATCCCACTT  600

seq1  ACAGAGCATAGTGCCTGCACCCAATAGCAGCCTTCTTGTTGGGCAGACAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCATAGTGCCTGCACCCAATAGCAGCCTTCTTGTTGGGCAGACAA  650

seq1  ACAACCATGCAACCATATCAGACTTGCCTAGTCAACTTCCATAGTTATGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCATGCAACCATATCAGACTTGCCTAGTCAACTTCCATAGTTATGA  700

seq1  TATCCAATCCACTCCAATAAGTAAGTGTGTGTGTGTGTGTGTGTGTGCGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATCCACTCCAATAAGTAAGTGTGTGTGTGTGTGTGTGTGTGCGC  750

seq1  GTGCACTCACAGATGTGATGTGTAGGTTTATATGTGTGTCTTTTTGAACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTCACAGATGTGATGTGTAGGTTTATATGTGTGTCTTTTTGAACT  800

seq1  CCTGACCCACCGTATACTATTTATAACATCATTAAATATTTGTTGGCTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCACCGTATACTATTTATAACATCATTAAATATTTGTTGGCTCA  850

seq1  TATCACACTGACCTTTTATGCAACAATAGATATCATAACATTTTCTGTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACTGACCTTTTATGCAACAATAGATATCATAACATTTTCTGTTT  900

seq1  TTTTTTTCCACCTTCCAAAGAATTC  922
      |||||||||||||||||||||||||
seq2  TTTTTTTCCACCTTCCAAAGAATTC  925