BAC Information

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BAC

Clone NameB6Ng01-149O13
Chromosome10 (Build37)
Map Location 10,324,529 - 10,488,813
singlet/doubletdoublet
Overlap geneEG382450, Grm1
Upstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik, Rab32
Downstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O13.bB6Ng01-149O13.g
ACCDH946120DH946121
length1,146625
definitionDH946120|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O13, 5' end.DH946121|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,487,638 - 10,488,813)(10,324,529 - 10,325,153)
sequence
gaattctctaccaaaagccaagaggaattttttttccttgatcaggctcc
cttatattatctgatggatggaatgaacaagaggttgagaattcccagta
tcagaaggatttgtcaacaatataccattactttccagttatgctaaatc
taagcagtcggctaattgtatgctgagttctcaagttttcactgctgaat
ttttttttttaagcttaaagtctttgggaaaatctagagtgtattctttc
catcttctcagaagaacacataagaagagactcttgacacagcaagattg
tctggatggtgatgtcccaagttctacccatgatgattgataaaacaaag
tataataagctattgtttcttccatggggcatgagaggggcatgctcctc
tctacagaagagatgtgcaaaggaaaacatgaacacacattctgatgatg
tggggcataagttgcttgataactttgtctatcattcccccctgtaggtt
ttttttttccttatcatatcatagcaatgaaagaaactcagatttagttc
aaggaatgatagtggttcagagaagacatggaatctattccagacttcat
tcaagactttatttacctgaggaaaaagtagtccataccttggaaaggct
accactctggacctatctattcttgactctgatagggcaaggggagtgaa
agtgtgaggcgctttgacctgtcccccaaaagtaaatgctatgtcactgg
gtgagttgtaccaactccaccttcctcttcacatttgggccacttgttac
catctgtttcatccctgtgacctccagtctcttgagctttccctaaggaa
aacctaaatacctttagcacggacagacttctctcttagactctaatttg
cttaaacttgcaggtccttaatgtaagggttgcaaaacctttgggagtct
ataccctttcatggggttatctaaacattggaaaacacagatagtgacat
tattattcatacagtagcacaaatgccttggtgggggtgaacacaaaatg
gaaacttagaatcatgcagcataggaaggtgggaatttaaagcttgaatg
tgtgatcagttatcctatctttcaggtaacacacaaggaaatgtgt
gaattccaacattgaatagttaatgagtttagaacaatagattccccacc
cagtggttgtgccatctggttgattttaaatattaagattgtttggtgtt
ttccatttgagatgattcaggtgggcaagtgagagagtgacgccacatga
cagtcatcagcagagcctccagcaggagtggatgtatggtggaacgtgat
cagaagctccaggccttctcaggaaaaaatcgggtttggtctgcttggca
agccagccttgggaactaaggccagatagccatttgtgggacaagcagag
ggtggagaccaggaaagccggccatggaggctgagcgagaccgccattgc
cattgcccgcatctagctggagcaagtatgggttttgtttgttttgtttt
gttttgtttttaattacaggctacagacaataattctcactttaactcat
accttattccaatattccatgattgatctggagtaaaaggaacagtggga
gagaagcacttgccagctctgtttattcaattttgtaggagtcaaatttg
aaaaattcaacagataggaaggctaaggtgagaaacaataaggaggagta
gaaaactggggggtggggtggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10487638_10488813
seq2: B6Ng01-149O13.b_48_1193 (reverse)

seq1  ACACATATCCCTTGTTGTTTTACCTGAAAAGGATAGGATAAAAACTGTAT  50
      |||||| | ||||| ||| ||||||||||  ||||||||   ||||| ||
seq2  ACACAT-TTCCTTG-TGTGTTACCTGAAA--GATAGGAT---AACTG-AT  42

seq1  CACACATTCATAGCCTTTAATATTCTCAACCTTCCTAATGCTGCAATGAT  100
      |||||||||| || |||||| |||| | |||||||| ||||||| |||||
seq2  CACACATTCA-AG-CTTTAA-ATTC-CCACCTTCCT-ATGCTGC-ATGAT  86

seq1  TCCTAATGTTTCTCATATTGTGGTCACCCACAACCATAGCATTTTTGTTG  150
      | |||| ||||| ||| ||||| |||||| | ||||  ||||||    ||
seq2  T-CTAA-GTTTC-CATTTTGTGTTCACCC-CCACCAAGGCATTT---GTG  129

seq1  CTACTGTTATGAATAATAATGTCACTATCTGTGTTTTCCAATTGTTTTAG  200
      |||||| |||||||||||||||||||||||||||||||||||   |||||
seq2  CTACTG-TATGAATAATAATGTCACTATCTGTGTTTTCCAAT--GTTTAG  176

seq1  ATAACCCCATGAAAGGGTTATTAGACTCCCAAAGGTTTTGCAACCCTAAC  250
      ||||||||||||||||||   |||||||||||||||||||||||||| ||
seq2  ATAACCCCATGAAAGGGT--ATAGACTCCCAAAGGTTTTGCAACCCTTAC  224

seq1  ATTAAGGACCCCTGCAAGTTTAAGCAAATTAGAGTCTAAGAGAGAAGTCT  300
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGA--CCTGCAAGTTTAAGCAAATTAGAGTCTAAGAGAGAAGTCT  272

seq1  GTCCGTGGCTAAAGGTATTTAGGTTTTCCTTAGGGAAAGCTCAAAGAGAC  350
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  GTCCGT-GCTAAAGGTATTTAGGTTTTCCTTAGGGAAAGCTC-AAGAGAC  320

seq1  TGGAGGTCACAGGGATGAAACAGATGGTAACAAGTGGCCCAAATGTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCACAGGGATGAAACAGATGGTAACAAGTGGCCCAAATGTGAAG  370

seq1  AGGAAGGTGGAGTTGGTACAACTCACCCAGTGACATAGCATTTACTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGGAGTTGGTACAACTCACCCAGTGACATAGCATTTACTTTTG  420

seq1  GGGGACAGGTCAAAGCGCCTCACACTTTCACTCCCCTTGCCCTATCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGGTCAAAGCGCCTCACACTTTCACTCCCCTTGCCCTATCAGAG  470

seq1  TCAAGAATAGATAGGTCCAGAGTGGTAGCCTTTCCAAGGTATGGACTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATAGATAGGTCCAGAGTGGTAGCCTTTCCAAGGTATGGACTACT  520

seq1  TTTTCCTCAGGTAAATAAAGTCTTGAATGAAGTCTGGAATAGATTCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCAGGTAAATAAAGTCTTGAATGAAGTCTGGAATAGATTCCATG  570

seq1  TCTTCTCTGAACCACTATCATTCCTTGAACTAAATCTGAGTTTCTTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGAACCACTATCATTCCTTGAACTAAATCTGAGTTTCTTTCAT  620

seq1  TGCTATGATATGATAAGGAAAAAAAAAACCTACAGGGGGGAATGATAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGATATGATAAGGAAAAAAAAAACCTACAGGGGGGAATGATAGAC  670

seq1  AAAGTTATCAAGCAACTTATGCCCCACATCATCAGAATGTGTGTTCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATCAAGCAACTTATGCCCCACATCATCAGAATGTGTGTTCATGT  720

seq1  TTTCCTTTGCACATCTCTTCTGTAGAGAGGAGCATGCCCCTCTCATGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTGCACATCTCTTCTGTAGAGAGGAGCATGCCCCTCTCATGCCC  770

seq1  CATGGAAGAAACAATAGCTTATTATACTTTGTTTTATCAATCATCATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGAAACAATAGCTTATTATACTTTGTTTTATCAATCATCATGGG  820

seq1  TAGAACTTGGGACATCACCATCCAGACAATCTTGCTGTGTCAAGAGTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTGGGACATCACCATCCAGACAATCTTGCTGTGTCAAGAGTCTC  870

seq1  TTCTTATGTGTTCTTCTGAGAAGATGGAAAGAATACACTCTAGATTTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGTGTTCTTCTGAGAAGATGGAAAGAATACACTCTAGATTTTCC  920

seq1  CAAAGACTTTAAGCTTAAAAAAAAAAATTCAGCAGTGAAAACTTGAGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTTTAAGCTTAAAAAAAAAAATTCAGCAGTGAAAACTTGAGAAC  970

seq1  TCAGCATACAATTAGCCGACTGCTTAGATTTAGCATAACTGGAAAGTAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATACAATTAGCCGACTGCTTAGATTTAGCATAACTGGAAAGTAAT  1020

seq1  GGTATATTGTTGACAAATCCTTCTGATACTGGGAATTCTCAACCTCTTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATTGTTGACAAATCCTTCTGATACTGGGAATTCTCAACCTCTTGT  1070

seq1  TCATTCCATCCATCAGATAATATAAGGGAGCCTGATCAAGGAAAAAAAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCATCCATCAGATAATATAAGGGAGCCTGATCAAGGAAAAAAAAT  1120

seq1  TCCTCTTGGCTTTTGGTAGAGAATTC  1176
      ||||||||||||||||||||||||||
seq2  TCCTCTTGGCTTTTGGTAGAGAATTC  1146

seq1: chr10_10324529_10325153
seq2: B6Ng01-149O13.g_66_690

seq1  GAATTCCAACATTGAATAGTTAATGAGTTTAGAACAATAGATTCCCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACATTGAATAGTTAATGAGTTTAGAACAATAGATTCCCCACC  50

seq1  CAGTGGTTGTGCCATCTGGTTGATTTTAAATATTAAGATTGTTTGGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTGTGCCATCTGGTTGATTTTAAATATTAAGATTGTTTGGTGTT  100

seq1  TTCCATTTGAGATGATTCAGGTGGGCAAGTGAGAGAGTGACGCCACATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTGAGATGATTCAGGTGGGCAAGTGAGAGAGTGACGCCACATGA  150

seq1  CAGTCATCAGCAGAGCCTCCAGCAGGAGTGGATGTATGGTGGAACGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCAGCAGAGCCTCCAGCAGGAGTGGATGTATGGTGGAACGTGAT  200

seq1  CAGAAGCTCCAGGCCTTCTCAGGAAAAAATCGGGTTTGGTCTGCTTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTCCAGGCCTTCTCAGGAAAAAATCGGGTTTGGTCTGCTTGGCA  250

seq1  AGCCAGCCTTGGGAACTAAGGCCAGATAGCCATTTGTGGGACAAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCTTGGGAACTAAGGCCAGATAGCCATTTGTGGGACAAGCAGAG  300

seq1  GGTGGAGACCAGGAAAGCCGGCCATGGAGGCTGAGCGAGACCGCCATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGACCAGGAAAGCCGGCCATGGAGGCTGAGCGAGACCGCCATTGC  350

seq1  CATTGCCCGCATCTAGCTGGAGCAAGTATGGGTTTTGTTTGTTTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCCGCATCTAGCTGGAGCAAGTATGGGTTTTGTTTGTTTTGTTTT  400

seq1  GTTTTGTTTTTAATTACAGGCTACAGACAATAATTCTCACTTTAACTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTAATTACAGGCTACAGACAATAATTCTCACTTTAACTCAT  450

seq1  ACCTTATTCCAATATTCCATGATTGATCTGGAGTAAAAGGAACAGTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTCCAATATTCCATGATTGATCTGGAGTAAAAGGAACAGTGGGA  500

seq1  GAGAAGCACTTGCCAGCTCTGTTTATTCAATTTTGTAGGAGTCAAATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACTTGCCAGCTCTGTTTATTCAATTTTGTAGGAGTCAAATTTG  550

seq1  AAAAATTCAACAGATAGGAAGGCTAAGGTGAGAAACAATAAGGAGGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCAACAGATAGGAAGGCTAAGGTGAGAAACAATAAGGAGGAGTA  600

seq1  GAAAACTGGGGGGTGGGGTGGAGGA  625
      |||||||||||||||||||||||||
seq2  GAAAACTGGGGGGTGGGGTGGAGGA  625