BAC Information

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BAC

Clone NameB6Ng01-149O19
Chromosome10 (Build37)
Map Location 114,008,853 - 114,009,936
singlet/doubletsinglet
Overlap geneTrhde
Upstream geneLOC100042666
Downstream gene4930473D10Rik, Tph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O19.bB6Ng01-149O19.g
ACCDH946132DH946133
length1,0701,108
definitionDH946132|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O19, 5' end.DH946133|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaacacatcattaactatcaaggtaattatactccttgatgc
ttccaagtggctcccaacctcacatgtcaagtctaagggattacatgaga
caatggctgctctagacacagtcactgaatttggactgtcaaggaagaag
gaaagttaaagctgttggctacttcctacataaaagataaggaatgttaa
tggggtgcaatatcaatcaggagtttttactctgtctgattggctgaaac
ttgtgtcttccttgagaatttttctactttctatatgtctatgaatatct
tatcactacatgagttgtctcagtcttgtcccttatcttcctgctctttg
gtttgaagctgcattctctgatccctatgcaaagacttctctccccctcc
ccctttttccctgtctcctatctgaacataatgactcttctgatattcct
ttgacaaaagagtcctaggactgggtgggaatacctgcctttctctgggc
atacaacttctgagaccacacaaacttttgagatctcagtatcttcattt
atgtacatttactgttgcggagattaaatgagtgaattagctctacgtat
atttgttaagcacctgctgtattccagatggaaagcttgcttctaaggat
agacagaacaatgaatcctagattcaaagtctgtgtagtagtagaaagag
aaacacagatcaaaacagacaataaaatacaaccggtttatatgtgagac
tggaagtggactcaggataccgaatggctacattgagagagttatgattt
gttatgcctgagggaaggagggaaagcttctaagcaagagtttaaattga
atttttaagaattatttaagtattctaggaataaatgacagtaaaggaca
tttatggcaaagggaatttgttaaaattcaaggaaagcttctagcatagt
ttcttggagagtgtggttcagagaggtttgtatggcacagtacagcaaac
acagtgatgacagagaggcccacagaacaaatcatcagttcccttgaaat
gagtttatatgacatatgag
gaattcttttttagctctgtatccaatttttaatagggttattaagttct
ctggagtctaacttcttgagttctttgtatatattgaatattaactctct
atcagatgtagtattggtaaagatcttttcccaatctgttggttgaggtt
ttgtcctattgacaatgtcctttgccttatagaaactttgcaattttatc
aggtcccatttgttgattcttgatctcagagcacaatcccttggtgttct
gttcaggaatttcccccctatgtccatgtgttcaaggctcttccccagtt
tctcctctataattttcagtgtatttggctttacgtggaggtccttgatc
cactttgacttgagctttgtacaaggagataaggatgggtcaatttgcat
ttttctacatgctgacaacctgttgaaccagcttcatttgttaaaaatgc
ttttttccactggatgtttttatctcctttgtcaaagatcaaatgaccat
aggtgtgtggatttatttcttggtcttcaattctattccattgatcttcc
tgcccgtctttttactaataccacgtagtttttatcactattgctctgta
atacaacttgactcaggtatggtgattgctctagaagttctttcattgtt
gagaatagtttttgatattctgtttgtttggttggttttttttttttttg
ttattccagatgaatttgaaaattgctctttctaagtctatgaagaattt
gatttggaatttttgatgaggattgcattaaatctgtagattgcttttgg
caagatgggcattttttagtatttttagtcctgccaatccattaccatgg
agatcttttccatctttcggaaatctttgatttctttcttcagagacttg
aagttcttgtcatacagatcttccacttgcttggtagagttccaccaagg
taaacatattatttattgacgatgtgatttgcattccctaatttcttctc
agccaatacctgagagagggagactacttagtgagaaatttaattccagc
cacgttgctgagtgttatcagctttagagtgtctgtgggaattcggggcc
attcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114008853_114009936
seq2: B6Ng01-149O19.b_45_1114

seq1  GAATTCTTTAACACATCATTAACTATCAAGGTAATTATACTCCTTGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAACACATCATTAACTATCAAGGTAATTATACTCCTTGATGC  50

seq1  TTCCAAGTGGCTCCCAACCTCACATGTCAAGTCTAAGGGATTACATGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTGGCTCCCAACCTCACATGTCAAGTCTAAGGGATTACATGAGA  100

seq1  CAATGGCTGCTCTAGACACAGTCACTGAATTTGGACTGTCAAGGAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTGCTCTAGACACAGTCACTGAATTTGGACTGTCAAGGAAGAAG  150

seq1  GAAAGTTAAAGCTGTTGGCTACTTCCTACATAAAAGATAAGGAATGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTAAAGCTGTTGGCTACTTCCTACATAAAAGATAAGGAATGTTAA  200

seq1  TGGGGTGCAATATCAATCAGGAGTTTTTACTCTGTCTGATTGGCTGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGCAATATCAATCAGGAGTTTTTACTCTGTCTGATTGGCTGAAAC  250

seq1  TTGTGTCTTCCTTGAGAATTTTTCTACTTTCTATATGTCTATGAATATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTCCTTGAGAATTTTTCTACTTTCTATATGTCTATGAATATCT  300

seq1  TATCACTACATGAGTTGTCTCAGTCTTGTCCCTTATCTTCCTGCTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTACATGAGTTGTCTCAGTCTTGTCCCTTATCTTCCTGCTCTTTG  350

seq1  GTTTGAAGCTGCATTCTCTGATCCCTATGCAAAGACTTCTCTCCCCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAGCTGCATTCTCTGATCCCTATGCAAAGACTTCTCTCCCCCTCC  400

seq1  CCCTTTTTCCCTGTCTCCTATCTGAACATAATGACTCTTCTGATATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTCCCTGTCTCCTATCTGAACATAATGACTCTTCTGATATTCCT  450

seq1  TTGACAAAAGAGTCCTAGGACTGGGTGGGAATACCTGCCTTTCTCTGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAAGAGTCCTAGGACTGGGTGGGAATACCTGCCTTTCTCTGGGC  500

seq1  ATACAACTTCTGAGACCACACAAACTTTTGAGATCTCAGTATCTTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTTCTGAGACCACACAAACTTTTGAGATCTCAGTATCTTCATTT  550

seq1  ATGTACATTTACTGTTGCGGAGATTAAATGAGTGAATTAGCTCTACGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTTACTGTTGCGGAGATTAAATGAGTGAATTAGCTCTACGTAT  600

seq1  ATTTGTTAAGCACCTGCTGTATTCCAGATGGAAAGCTTGCTTCTAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAAGCACCTGCTGTATTCCAGATGGAAAGCTTGCTTCTAAGGAT  650

seq1  AGACAGAACAATGAATCCTAGATTCAAAGTCTGTGTAGTAGTAGAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAACAATGAATCCTAGATTCAAAGTCTGTGTAGTAGTAGAAAGAG  700

seq1  AAACACAGATCAAAACAGACAATAAAATACAACCGGTTTATATGTGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGATCAAAACAGACAATAAAATACAACCGGTTTATATGTGAGAC  750

seq1  TGGAAGTGGACTCAGGATACCGAATGGCTACATTGAGAGAGTTATGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGGACTCAGGATACCGAATGGCTACATTGAGAGAGTTATGATTT  800

seq1  GTTATGCCTGAGGGAAGGAGGGAAAGCTTCTAAGCAAGAGTTTAAATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCCTGAGGGAAGGAGGGAAAGCTTCTAAGCAAGAGTTTAAATTGA  850

seq1  ATTTTTAAGAATTATTTAAGTATTCTAGGAATAAATGACAGTAAAGGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGAATTATTTAAGTATTCTAGGAATAAATGACAGTAAAGGACA  900

seq1  TTTATGGCAAAGGGGAATTTGTTAAAAATTCAAGGAAAGCTTCTAGCATA  950
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  TTTATGGCAAA-GGGAATTTGTT-AAAATTCAAGGAAAGCTTCTAGCATA  948

seq1  GTTTCTTGGAGAGTGTGGTTCAGAGAGGTTTGTATGGCACAAGGTAAGGA  1000
      |||||||||||||||||||||||||||||||||||||||||  |||   |
seq2  GTTTCTTGGAGAGTGTGGTTCAGAGAGGTTTGTATGGCACA--GTA--CA  994

seq1  GCAAACCACAAGTGATGACAGAGAGGCCCACAGGAACAAAATCATCAAGT  1050
      ||||| ||| |||||||||||||||||||||| |||| |||||||| |||
seq2  GCAAA-CAC-AGTGATGACAGAGAGGCCCACA-GAAC-AAATCATC-AGT  1039

seq1  TCCCTTGGAAATTGTAGTTATATGACATTATGAG  1084
      |||||||  || ||   |||||||||| ||||||
seq2  TCCCTTG--AAATGAGTTTATATGACA-TATGAG  1070