BAC Information

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BAC

Clone NameB6Ng01-149P09
Chromosome10 (Build37)
Map Location 98,256,933 - 98,397,856
singlet/doubletdoublet
Overlap geneAtp2b1
Upstream geneEG667438, EG432494
Downstream geneWdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149P09.bB6Ng01-149P09.g
ACCDH946160DH946161
length7141,160
definitionDH946160|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P09, 5' end.DH946161|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,256,933 - 98,257,645)(98,396,688 - 98,397,856)
sequence
gaattcatctcctgtctaccagacattctccccttgccttctcctcttac
ttcctcagctgtactgatctgtcttgatggatggatctcattgctcctat
atgatgggcattcagaagactgagttaactggcaacatctgccctgcatc
ccgatgtcttcaattcaggtcataaccatggtcttgcgcgcgctcgactg
gccaggaagaacaacgctgcaacaggatccttctgcacatgtttattggg
agagcttaattgcagaggcgaagagaccccgagcccagaactggtgctgc
ttttataggcctaggagaggcgtgtctcacacccggattggttatgcact
atgcctcatttgcatgttcctcatctgattggctactctctctctctctc
tgtacctcacagagcctcattatcatacctcatttgtatgtctcacatct
gattggttatactctcaaagcctcattatcatgcccgggccaggcagtgt
ctttgcaaaaaactttactgcatatgtacacattggttgtttgtccaaac
ttatgcgtggtggccagcagtagtcagcagtttcccacaccatggttcta
attcactggacattttaccatgtgttgaacatcaaggtaatgtccggtgt
ccgtcatttcatttggttctcatcagactcctctaaatccctgtgaaatg
tgaggaagcagtgc
gaattcctcctttaaggccagggtaatgccaccaaacgtggcagcacaca
cctgaaggccccagcacttgggaggtggaggcaggatgtctgcagagcaa
gcccagctgcatgagatcctatctcaaacaaagaataatggattaggaca
gtatcaaatatccactgctgtctgatacttcaaatgagagacacactcta
atgagaactagatctaaacaggtcccttttaaaccagcattttgtaaata
agattaattaaatgcataatatcctaaacagttttgcagaaatagttgga
tgaacaggctagcatttcaagatcgatccaagaacattttaatttcgaga
aaagaaaaaaacaaaactgagaaaccaacaaacatatctagctcatgaca
caccaaaggcacagttattggcaatggaaagagcaactgcccaggactag
agaactgtcccactggtcagtccttcaggcccctgggcacttgtccttag
gtccttgtctacagaggaaggaactgaagggcttatcaccttatcaggaa
tgctgccaaacagatgaaggcacaccagctgttggtgcaatgtgcttctc
acaatcacctaactgtgtaagaaaatcagactctagcctcatgactataa
aaactaaagtcaacaagccaacctgttctcctaaactcaggccaaagggt
gacatccatgacatatgtggcatgtcatggtttgaatgaaaatggctctt
ataggcccatgcagtggcaccacagggccttgtggccttgtgagagtggg
tgtggctttgttagagaaagtatgtcactgggagtgggctctgaagtctc
agatgctcaagccagggccagtgtctcattcactcttcctgctgcctgcc
aatccagatgtagaattcttagctaccatgcctgcctgctggccggccag
tatgtttctcactctgacaataatgggactgaactctgaactgcaagtca
gccctaattaaatgttgtcctttatagattgccttggtcatatttcctct
tcacagcagtaaatccctactgaagaaatggcgtaaataaaaatttaaga
atgaactaaatatttcctaaaaaatttttgcacatatcccaaattaactg
gacaattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98256933_98257645
seq2: B6Ng01-149P09.b_46_759

seq1  GAATTCATCTCCTGTCTACCAGACATTCTCCCCTTGCCTTCTCCTCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCTGTCTACCAGACATTCTCCCCTTGCCTTCTCCTCTTAC  50

seq1  TTCCTCAGCTGTACTGATCTGTCTTGATGGATGGATCTCATTGCTCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGCTGTACTGATCTGTCTTGATGGATGGATCTCATTGCTCCTAT  100

seq1  ATGATGGGCATTCAGAAGACTGAGTTAACTGGCAACATCTGCCCTGCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGCATTCAGAAGACTGAGTTAACTGGCAACATCTGCCCTGCATC  150

seq1  CCGATGTCTTCAATTCAGGTCATAACCATGGTCTTGCGCGCGCTCGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTCTTCAATTCAGGTCATAACCATGGTCTTGCGCGCGCTCGACTG  200

seq1  GCCAGGAAGAACAACGCTGCAACAGGATCCTTCTGCACATGTTTATTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAGAACAACGCTGCAACAGGATCCTTCTGCACATGTTTATTGGG  250

seq1  AGAGCTTAATTGCAGAGGCGAAGAGACCCCGAGCCCAGAACTGGTGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTAATTGCAGAGGCGAAGAGACCCCGAGCCCAGAACTGGTGCTGC  300

seq1  TTTTATAGGCCTAGGAGAGGCGTGTCTCACACCCGGATTGGTTATGCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGGCCTAGGAGAGGCGTGTCTCACACCCGGATTGGTTATGCACT  350

seq1  ATGCCTCATTTGCATGTTCCTCATCTGATTGGCTACTCTCTCTCTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCATTTGCATGTTCCTCATCTGATTGGCTACTCTCTCTCTCTCTC  400

seq1  TGTACCTCACAGAGCCTCATTATCATACCTCATTTGTATGTCTCACATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTCACAGAGCCTCATTATCATACCTCATTTGTATGTCTCACATCT  450

seq1  GATTGGTTATACTCTCAAAGCCTCATTATCATGCCCGGGCCAGGCAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTTATACTCTCAAAGCCTCATTATCATGCCCGGGCCAGGCAGTGT  500

seq1  CTTTGCAAAAAACTTTACTGCATATGTACACATTGGTTGTTTGTCCAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAAAAACTTTACTGCATATGTACACATTGGTTGTTTGTCCAAAC  550

seq1  TTATGCGTGGTGGCCAGCAGTAGTCAGCAGTTTCCCACACCATGGTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCGTGGTGGCCAGCAGTAGTCAGCAGTTTCCCACACCATGGTTCTA  600

seq1  ATTCACTGGACA-TTTACCATGTGTTGAACATCAAGGTAATGTCCGGTGT  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGGACATTTTACCATGTGTTGAACATCAAGGTAATGTCCGGTGT  650

seq1  CCGTCATTTCATTTGGTTCTCATCAGACTCCTCTAAATCCCTGTGAAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCATTTCATTTGGTTCTCATCAGACTCCTCTAAATCCCTGTGAAATG  700

seq1  TGAGGAAGCAGTGC  713
      ||||||||||||||
seq2  TGAGGAAGCAGTGC  714

seq1: chr10_98396688_98397856
seq2: B6Ng01-149P09.g_68_1227 (reverse)

seq1  TTTAATTGTCCAAAGTAATTTGTGATATGTTGGCAAAAAATTTTTATGAA  50
      ||||||||||| |  ||||||| |||||||  ||||||| |||||| |||
seq2  TTTAATTGTCC-AGTTAATTTGGGATATGT--GCAAAAATTTTTTAGGAA  47

seq1  ATTTATTTAGTTTCTATCTTTAAATTTTTATTTACGCCATGTCTTAGTTA  100
      |  |||||||||   ||  ||||||||||||||||||||| ||||   ||
seq2  A--TATTTAGTT--CATTCTTAAATTTTTATTTACGCCATTTCTTCAGTA  93

seq1  GGGATTTACTGCTGTGAAGAGAAATAATGACCAAGGCAATTCTTATAAAG  150
      ||||||||||||||||||||| ||  ||||||||||||||   |||||||
seq2  GGGATTTACTGCTGTGAAGAGGAAATATGACCAAGGCAAT--CTATAAAG  141

seq1  GACAACATTTAATTAGGGCTGACTTGCAGTTCAGAGGTTCAGT-CCATTA  199
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  GACAACATTTAATTAGGGCTGACTTGCAGTTCAGA-GTTCAGTCCCATTA  190

seq1  TTGTCAGAGTGAGAAACATACTGGCCGGCCAGCAGGCAGGCATGGTAGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAGTGAGAAACATACTGGCCGGCCAGCAGGCAGGCATGGTAGCT  240

seq1  AAGAATTCTACATCTGGATTGGCAGGCAGCAGGAAGAGTGAATGAGACAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTACATCTGGATTGGCAGGCAGCAGGAAGAGTGAATGAGACAC  290

seq1  TGGGCCTGGCTTGAGCATCTGAGACTTCAGAGCCCACTCCCAGTGACATA  349
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCTTGAGCATCTGAGACTTCAGAGCCCACTCCCAGTGACATA  340

seq1  CTTTCTCTAACAAAGCCACACCCACTCTCACAAGGCCACAAGGCCCTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTAACAAAGCCACACCCACTCTCACAAGGCCACAAGGCCCTGTG  390

seq1  GTGCCACTGCATGGGCCTATAAGAGCCATTTTCATTCAAACCATGACATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACTGCATGGGCCTATAAGAGCCATTTTCATTCAAACCATGACATG  440

seq1  CCACATATGTCATGGATGTCACCCTTTGGCCTGAGTTTAGGAGAACAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATGTCATGGATGTCACCCTTTGGCCTGAGTTTAGGAGAACAGGT  490

seq1  TGGCTTGTTGACTTTAGTTTTTATAGTCATGAGGCTAGAGTCTGATTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTTGACTTTAGTTTTTATAGTCATGAGGCTAGAGTCTGATTTTC  540

seq1  TTACACAGTTAGGTGATTGTGAGAAGCACATTGCACCAACAGCTGGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAGTTAGGTGATTGTGAGAAGCACATTGCACCAACAGCTGGTGTG  590

seq1  CCTTCATCTGTTTGGCAGCATTCCTGATAAGGTGATAAGCCCTTCAGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCTGTTTGGCAGCATTCCTGATAAGGTGATAAGCCCTTCAGTTC  640

seq1  CTTCCTCTGTAGACAAGGACCTAAGGACAAGTGCCCAGGGGCCTGAAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGTAGACAAGGACCTAAGGACAAGTGCCCAGGGGCCTGAAGGA  690

seq1  CTGACCAGTGGGACAGTTCTCTAGTCCTGGGCAGTTGCTCTTTCCATTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAGTGGGACAGTTCTCTAGTCCTGGGCAGTTGCTCTTTCCATTGC  740

seq1  CAATAACTGTGCCTTTGGTGTGTCATGAGCTAGATATGTTTGTTGGTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACTGTGCCTTTGGTGTGTCATGAGCTAGATATGTTTGTTGGTTTC  790

seq1  TCAGTTTTGTTTTTTTCTTTTCTCGAAATTAAAATGTTCTTGGATCGATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTGTTTTTTTCTTTTCTCGAAATTAAAATGTTCTTGGATCGATC  840

seq1  TTGAAATGCTAGCCTGTTCATCCAACTATTTCTGCAAAACTGTTTAGGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGCTAGCCTGTTCATCCAACTATTTCTGCAAAACTGTTTAGGAT  890

seq1  ATTATGCATTTAATTAATCTTATTTACAAAATGCTGGTTTAAAAGGGACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCATTTAATTAATCTTATTTACAAAATGCTGGTTTAAAAGGGACC  940

seq1  TGTTTAGATCTAGTTCTCATTAGAGTGTGTCTCTCATTTGAAGTATCAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGATCTAGTTCTCATTAGAGTGTGTCTCTCATTTGAAGTATCAGA  990

seq1  CAGCAGTGGATATTTGATACTGTCCTAATCCATTATTCTTTGTTTGAGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGGATATTTGATACTGTCCTAATCCATTATTCTTTGTTTGAGAT  1040

seq1  AGGATCTCATGCAGCTGGGCTTGCTCTGCAGACATCCTGCCTCCACCTCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTCATGCAGCTGGGCTTGCTCTGCAGACATCCTGCCTCCACCTCC  1090

seq1  CAAGTGCTGGGGCCTTCAGGTGTGTGCTGCCACGTTTGGTGGCATTACCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGGCCTTCAGGTGTGTGCTGCCACGTTTGGTGGCATTACCC  1140

seq1  TGGCCTTAAAGGAGGAATTC  1169
      ||||||||||||||||||||
seq2  TGGCCTTAAAGGAGGAATTC  1160