BAC Information

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BAC

Clone NameB6Ng01-150H09
Chromosome10 (Build37)
Map Location 91,122,357 - 91,123,501
singlet/doubletsinglet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150H09.bB6Ng01-150H09.g
ACCDH946535DH946536
length1,1241,220
definitionDH946535|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H09, 5' end.DH946536|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatgatttttctctgtatgtgtttcagaggcatcaattactgc
tgtggggcaccttcagcattgcctaaagctgcaataaattccctagcttt
aactttgaagatttgaggaatgctaatactgagaagtgtatgaattatta
ctcttgctctaacccagcaatgtgcccccaaagagtaaacacaggcctta
tttcattcgggagtggatgaaacttcccctgattgagtaaagagagatat
gatagtgcaccaggggggcatggcagactttttaattgttttaaattcag
gttttcattgggtgaagcttctgaaggttctggaagaagaactgtagtca
ctcactgttttttttttttcataaacatttcaaatttcccaagttacctg
attcataaaagaatattattcagcaggtgagttagttgtgcttagttcca
ttcttggtgagcttatctctgacttcttggtggtccagaaaaatgaaacc
ttccattcaaagttgatgtgaaattggaagtccatcagccatgcctacta
ccttggttgaccctggaatttgaaaagacttaaaaacacaatgtgaccac
ctgccaggtcttctgttcttaccaacaactatagacatatttgtaactcc
atttctgttttgtccaaatcaaaccattagagagaggaaggagataaaga
aggaggggagaagacattgatataaagggtgtggcatgttactgttgagg
tccacaatgcacatagcttcagagactctgaaaattttctgtaagatgca
tgggtgggaagatagcttcagaggagctgaagtacctgctctgtcatgga
atagtaaccattcagaggagcaagtatctttctaaaggccagtgatcttt
ctaaagctgcagcttaataaagagtttggtctatgaaatgacatagaaag
gataggaacaggcttgtatgactgtttctacttcttggtagttcccaata
cccaggtcacattctagtcactacatgattttatgggaagggggcacagt
tgaaattattgttttgtttgactctatgccttctatcttcctccatcaag
cttgtttatgcgtacaagtttgca
gaattcctagaaagaagatctgtagggaaagactagctgactgattagaa
tggcagtaatttagtaaggttagaaggttgcaggtctggtgtctaattat
actttaatcttttactaggtttggcctcctaaataacccttccttgcaca
cctctgtgccagatctagcacccttgattaacagaaactacaaaacaaac
aaacaaacaaaagcaaaaacaatagaaaacaaaacaaaacaaaaaaccct
ttaagaatgcattaacctaacagaccattaattccaaccaacacccaaaa
gataagggggcatcaagcgcctatcttgtaacttgcctctctttcatagt
ccacccaagtgttcttaaatgctttgtcttcttttttattatttttactt
ttgtatttttacagtctagtcataaccttccttcaagtccccccttgcca
agttcctcatcatattcctcctccccctgtctccaagaggatcccccccc
ccaaatcaggcctccccactctctgaggcctcaagtctcttctccccacg
aggccagacctggcagtcctgtatacatgttcggtggccatagaacagtt
catgtatgctgcctggttggtggcttcagtgtctaagagatctcaggggt
ctagagtagttgagactgctgatcttcctatgggattacctcctcttcag
cttcttccagcctttccctcatttaaccacaggggaaccctgacttcagt
ccaatggttgggtgtgagtatctgtctctgtctcagtcagctgcttgttg
ggccgctcagaggacagccatgctaggcacctgtctgtaagcacaccata
gcatcagtaatagtattaggccttggagccttctcttgatcacaagttaa
gcccggtcactggacctcctttccctcagtctcttctccagttcactcct
gcagtgctttttgacaggaacaatagtcctgtctaacattctgatacact
gtattcttcaactgtcttttctgtatacgatccttgttctgtggtactga
ccagatccatgtacttctgtagaaacatgttatttggtacaaatgctttc
aaggccatggccactgataaaattcggctcgaataaacacagttcctctt
cctgagggacaggtgttctatgagtgacataggtcggcctaaagcgcttt
tatacactctaaccgatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91122357_91123501
seq2: B6Ng01-150H09.b_47_1170

seq1  GAATTCAAATGATTTTTCTCTGTATGTGTTTCAGAGGCATCAATTACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGATTTTTCTCTGTATGTGTTTCAGAGGCATCAATTACTGC  50

seq1  TGTGGGGCACCTTCAGCATTGCCTAAAGCTGCAATAAATTCCCTAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGCACCTTCAGCATTGCCTAAAGCTGCAATAAATTCCCTAGCTTT  100

seq1  AACTTTGAAGATTTGAGGAATGCTAATACTGAGAAGTGTATGAATTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGAAGATTTGAGGAATGCTAATACTGAGAAGTGTATGAATTATTA  150

seq1  CTCTTGCTCTAACCCAGCAATGTGCCCCCAAAGAGTAAACACAGGCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTCTAACCCAGCAATGTGCCCCCAAAGAGTAAACACAGGCCTTA  200

seq1  TTTCATTCGGGAGTGGATGAAACTTCCCCTGATTGAGTAAAGAGAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCGGGAGTGGATGAAACTTCCCCTGATTGAGTAAAGAGAGATAT  250

seq1  GATAGTGCACCAGGGGGGCATGGCAGACTTTTTAATTGTTTTAAATTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGCACCAGGGGGGCATGGCAGACTTTTTAATTGTTTTAAATTCAG  300

seq1  GTTTTCATTGGGTGAAGCTTCTGAAGGTTCTGGAAGAAGAACTGTAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTGGGTGAAGCTTCTGAAGGTTCTGGAAGAAGAACTGTAGTCA  350

seq1  CTCACTGTTTTTTTTTTTTCATAAACATTTCAAATTTCCCAAGTTACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTTTTTTTTTTTTCATAAACATTTCAAATTTCCCAAGTTACCTG  400

seq1  ATTCATAAAAGAATATTATTCAGCAGGTGAGTTAGTTGTGCTTAGTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAAGAATATTATTCAGCAGGTGAGTTAGTTGTGCTTAGTTCCA  450

seq1  TTCTTGGTGAGCTTATCTCTGACTTCTTGGTGGTCCAGAAAAATGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTGAGCTTATCTCTGACTTCTTGGTGGTCCAGAAAAATGAAACC  500

seq1  TTCCATTCAAAGTTGATGTGAAATTGGAAGTCCATCAGCCATGCCTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCAAAGTTGATGTGAAATTGGAAGTCCATCAGCCATGCCTACTA  550

seq1  CCTTGGTTGACCCTGGAATTTGAAAAGACTTAAAAACACAATGTGACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTGACCCTGGAATTTGAAAAGACTTAAAAACACAATGTGACCAC  600

seq1  CTGCCAGGTCTTCTGTTCTTACCAACAACTATAGACATATTTGTAACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGTCTTCTGTTCTTACCAACAACTATAGACATATTTGTAACTCC  650

seq1  ATTTCTGTTTTGTCCAAATCAAACCATTAGAGAGAGGAAGGAGATAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTTTGTCCAAATCAAACCATTAGAGAGAGGAAGGAGATAAAGA  700

seq1  AGGAGGGGAGAAGACATTGATATAAAGGGTGTGGCATGTTACTGTTGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGAGAAGACATTGATATAAAGGGTGTGGCATGTTACTGTTGAGG  750

seq1  TCCACAATGCACATAGCTTCAGAGACTCTGAAAATTTTCTGTAAGATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATGCACATAGCTTCAGAGACTCTGAAAATTTTCTGTAAGATGCA  800

seq1  TGGGTGGGAAGATAGCTTCAGAGGAGCTGAAGTACCTGCTCTGTCATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGAAGATAGCTTCAGAGGAGCTGAAGTACCTGCTCTGTCATGGA  850

seq1  ATAGTAACCATTCAGAGGAGCAAGTATCTTTCTAAAGGCCAGTGATCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAACCATTCAGAGGAGCAAGTATCTTTCTAAAGGCCAGTGATCTTT  900

seq1  CTAAAGCTGCAGCTTAATAAAGAGTTTGGTCTATGAAATGACATAGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCTGCAGCTTAATAAAGAGTTTGGTCTATGAAATGACATAGAAAG  950

seq1  GATAAGGAACAGGCTTGTATGAACTGTTTCTACCTTCCTGGTAGTTCCCA  1000
      ||| ||||||||||||||||| |||||||||| |||| ||||||||||| 
seq2  GAT-AGGAACAGGCTTGTATG-ACTGTTTCTA-CTTCTTGGTAGTTCCC-  996

seq1  AATACCCAGGTCACATTCTAGTTCCACCTACAATGATTTTATGGGAGGGG  1050
      ||||||||||||||||||||||  || |||| ||||||||||||||  ||
seq2  AATACCCAGGTCACATTCTAGT--CA-CTAC-ATGATTTTATGGGA-AGG  1041

seq1  GGGCACAGTTTGAAAAATTAAATTGTTTTTGTATTTGACTTTCTAATGCT  1100
      ||||||||||    |||||  |||||||   | ||||||| |   |||| 
seq2  GGGCACAGTT---GAAATT--ATTGTTT---TGTTTGACTCT---ATGCC  1080

seq1  TTCTAATCTTCTTCCATCCAGCTTTGTTATGCGTACAAGTTTGCA  1145
      |||| |||||| |||||| |||||  |||||||||||||||||||
seq2  TTCT-ATCTTCCTCCATCAAGCTTGTTTATGCGTACAAGTTTGCA  1124