BAC Information

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BAC

Clone NameB6Ng01-150L09
Chromosome10 (Build37)
Map Location 111,097,212 - 111,098,227
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
Downstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150L09.bB6Ng01-150L09.g
ACCDH946721DH946722
length1,1651,013
definitionDH946721|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L09, 5' end.DH946722|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaacgaaaatcaaaacaaccctaagat
tccatctcacaccagtcagaatggctaagatcaaaagttcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcttccactgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctca
gaaaattggacatggtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagaaacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtatatttacacaatg
gaatactactcagctattaaaaagaatgaacttatgaaattcctaggcaa
atggttggacctggagggcattatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagttacaatttgcaaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacattttgccccttcttaggattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagaca
aaagaacagaccatctacagactgccatatccagggatccatcccataat
cagcctccaaaagctgacaccattgcatacactagcaagattgtgctgat
aggaccctgatatagctgtctcttgtgagactatgccagggcctagcaaa
cacataagtggatgctcacagtccactattggatggatcacaggacccca
aaggaggagctagagaaaatacccaagagctaaagggatctgcaacccta
tagtggacacatataactaccagtaccccggagctctgacttctagctgc
atatgtatcaaaagatgctagtcgcatcactggaagagaggcccattgac
tcaactctaatgccagtaaggcacgtccaggcaaaagtgggagtggtgtg
agaatagaggggggt
gaattctttaatcagagtctcataaataagaagttgaacatgacaaaccc
aaatcccactatggaataaaaaagatagatgtactatgttaaccccacag
acatttcagggtggctagctactttgaggagcaacatcttctcacgtgga
agttgctgctggaacatcatggtacctgctgcctgctgttcttccttgct
tggagcagaggcctcaggagcggcccctgggtttgcttagtgtttagtta
ttgtcatgtagctcagggccagtacagtgcaaacttataaaaaaacaaaa
aacaagaacttgtctgctcttcagactgcctttgtcaagtgatatttgtt
taaaaaactctgttcagacttaatgcattctccttaatgcattcagactt
aatggattccacattcaaggtgagacttctaccaaattcagtgagtttcc
ccgaacagatgcgtaagcccactggctaatgtgttttctagtcctacaca
ggtccagttgacacaaaatagtagagtatgtggtttccacttccataaag
ggatgcatactgtttctccctacagttttaagtagaaattttggtttgtg
gctagatccattagaaagacttttagataggagaaaaaaaaatcaatgtg
aatttgtggtcttcctagagctctgattttgaaataatcttttaatcctg
tcaggtctacttccaagcaggaggcaggaaagtgggcgttcctgcagaga
taggtgagggtaggagggagagagtcaaacagtatgcagggaacaggaaa
catgctcttatcagtgaaaaacatcagacgacattgttgttctcccatca
cttagtgtggcgtctgactcgtaagatgtgctctaatatttggtggatag
atggatggtacccttcatagggtgttactctttaaggatatctggctttc
ctaaagaccagggatgttattaggggaagagatgtttgggttattaggac
agaatcttttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111097212_111098227
seq2: B6Ng01-150L09.g_66_1078

seq1  GAATTCTTTAATCAGAGTCTCATAAATAAGAAGTTGAACATGACAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATCAGAGTCTCATAAATAAGAAGTTGAACATGACAAACCC  50

seq1  AAATCCCACTATGGAATAAAAAAGATAGATGTACTATGTTAACCCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCACTATGGAATAAAAAAGATAGATGTACTATGTTAACCCCACAG  100

seq1  ACATTTCAGGGTGGCTAGCTACTTTGAGGAGCAACATCTTCTCACGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAGGGTGGCTAGCTACTTTGAGGAGCAACATCTTCTCACGTGGA  150

seq1  AGTTGCTGCTGGAACATCATGGTACCTGCTGCCTGCTGTTCTTCCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGCTGGAACATCATGGTACCTGCTGCCTGCTGTTCTTCCTTGCT  200

seq1  TGGAGCAGAGGCCTCAGGAGCGGCCCCTGGGTTTGCTTAGTGTTTAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGAGGCCTCAGGAGCGGCCCCTGGGTTTGCTTAGTGTTTAGTTA  250

seq1  TTGTCATGTAGCTCAGGGCCAGTACAGTGCAAACTTATAAAAAAACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATGTAGCTCAGGGCCAGTACAGTGCAAACTTATAAAAAAACAAAA  300

seq1  AACAAGAACTTGTCTGCTCTTCAGACTGCCTTTGTCAAGTGATATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACTTGTCTGCTCTTCAGACTGCCTTTGTCAAGTGATATTTGTT  350

seq1  TAAAAAACTCTGTTCAGACTTAATGCATTCTCCTTAATGCATTCAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACTCTGTTCAGACTTAATGCATTCTCCTTAATGCATTCAGACTT  400

seq1  AATGGATTCCACATTCAAGGTGAGACTTCTACCAAATTCAGTGAGTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTCCACATTCAAGGTGAGACTTCTACCAAATTCAGTGAGTTTCC  450

seq1  CCGAACAGATGCGTAAGCCCACTGGCTAATGTGTTTTCTAGTCCTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACAGATGCGTAAGCCCACTGGCTAATGTGTTTTCTAGTCCTACACA  500

seq1  GGTCCAGTTGACACAAAATAGTAGAGTATGTGGTTTCCACTTCCATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGTTGACACAAAATAGTAGAGTATGTGGTTTCCACTTCCATAAAG  550

seq1  GGATGCATACTGTTTCTCCCTACAGTTTTAAGTAGAAATTTTGGTTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCATACTGTTTCTCCCTACAGTTTTAAGTAGAAATTTTGGTTTGTG  600

seq1  GCTAGATCCATTAGAAAGACTTTTAGATAGGAGAAAAAAAAATCAATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGATCCATTAGAAAGACTTTTAGATAGGAGAAAAAAAAATCAATGTG  650

seq1  AATTTGTGGTCTTCCTAGAGCTCTGATTTTGAAATAATCTTTTAATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGGTCTTCCTAGAGCTCTGATTTTGAAATAATCTTTTAATCCTG  700

seq1  TCAGGTCTACTTCCAAGCAGGAGGCAGGAAAGTGGGCGTTCCTGCAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTACTTCCAAGCAGGAGGCAGGAAAGTGGGCGTTCCTGCAGAGA  750

seq1  TAGGTGAGGGTAGGAGGGAGAGAGTCAAACAGTATGCAGGGAACAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGGGTAGGAGGGAGAGAGTCAAACAGTATGCAGGGAACAGGAAA  800

seq1  CATGCTCTTATCAGTGAAAAACATCAGACGACATTGTTGTTC-CCCATCA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATGCTCTTATCAGTGAAAAACATCAGACGACATTGTTGTTCTCCCATCA  850

seq1  CTTAGTGTGGCGTCTGACTCGTAAGATGTGCTCTAAATATTTGGTGGATA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTAGTGTGGCGTCTGACTCGTAAGATGTGCTCT-AATATTTGGTGGATA  899

seq1  GATGGATGGTACCC-TCATAGGGTGTTACTCTTTAAGGATAGCTGGCCTT  948
      |||||||||||||| |||||||||||||||||||||||||| |||| |||
seq2  GATGGATGGTACCCTTCATAGGGTGTTACTCTTTAAGGATATCTGG-CTT  948

seq1  TCCTTAAAGAGCAAGGGATGTTATTAGGGGAGAAGCAGTTTGTGTTTATA  998
      ||| |||||| | ||||||||||||||||||  ||  ||||| |||  ||
seq2  TCC-TAAAGA-CCAGGGATGTTATTAGGGGAAGAGATGTTTGGGTTATTA  996

seq1  GGACAGAATCCTTTTAGA  1016
      ||||||||| ||||||||
seq2  GGACAGAAT-CTTTTAGA  1013