BAC Information

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BAC

Clone NameB6Ng01-151F12
Chromosome10 (Build37)
Map Location 72,610,143 - 72,611,362
singlet/doubletsinglet
Overlap geneLOC432471
Upstream geneLOC100040505, Zwint
Downstream geneLOC544705, LOC100039981, LOC623191, Pcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F12.bB6Ng01-151F12.g
ACCDH947185DH947186
length1,198924
definitionDH947185|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F12, 5' end.DH947186|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattttgtatttttctctcaaaaaggtataatttaccattca
tatagttatctaatatattatgaccagactgaaaattacacatttgtgaa
tgactgtaattgtttctatgaatcccttcctaaaggtacctcttcagatc
agatgtctgaccctgcattaaagacctctaagcactgcattttcttctct
tttttttccttttgattatttcacttatttgcatttcaaatgttattccc
ctttcctggtttcccctctgcaaacccctatcccatccccctctccctgc
ttctatgagggtgttcccccccacacacccccactcctgcctcactaccc
tggtattcccctacactggggcattgacccttcacaggatcaagggcctc
tcctcctactgatgtctgacaaggccatcatcagctacatacaaagttga
acatcaaagcatctattttgagtgagacagttattcttgaagtgaatgga
gtaaaattagatatggttacagagaaggaaaatattttcttgcttttttt
tcccctcccaaaatgtcattttgaattttttccctccttgtactatacaa
agatcatacatccatttcttatgaagaacaggttcagtgaatcaattaat
taaattttccttatgcagctctggtttaacagtataaaagctttttcttc
tcctttaaagatacttgctaatagaaggactgcttacttcttccaaggtt
atatttagacacttgacagggtcacggggctcatgcccagtgttccatgc
ccggtacacagacctttgtgatcaaaatcaccctacagcgtaacaccaaa
gctactctctctttcccatttgtgtcaccgtgtggaatgaaataaaaaaa
aaatcacaaatccctccagggagacaacagtgccagaaggacacccatca
tttctcaatatgagaaacagtaggatgggagaggggaatcagagtccata
cctggggagtgcattggcagagaagatattatctattcttgttgcattcc
ctattcaatctgctaaacccaatctctgaattatagaatagtattctaga
ggttggataggagagattgcaatatgcttttaaacaggaaaaaaggaagc
cgtatgtaatgcgtgatctaatggactagaactctgtaacgggacaga

gaattctttgtctagctctgagccccatttttaatggggttatttgattt
tctggaatccaccttcttgagttctttatatatatctggcagatattcct
tcttggaatataggctgtaggctagggatggttttctatgtggtgtttga
ttttaaaagaaagtattgaaagggttaaacaagctttgcagaacagttca
tgagtccctcaagttcatagatgaatgctggttgtttggtttctgctctg
tccatccattcactcagcagcctgtgcagaccacttgtcagatacaagtt
ctgcttcaggtctgagattaaaggagcaaggaaagggaagctactgttaa
agagaggaaatggtcgtccacaatgaactcacaactctgaagcagtatat
gcagtcctgacacagagccaccgtctgggggcacaataggaaacaggatg
ccaggccttatcttctttgttagccaacaggatctgcaatcacttaggag
attatgatgtgtttgtgatgatattcccaggtaaagctggctggaagaat
acaagctagtagaatagtgattgatccacagaaaagtgctcaaagcacac
aagagtctacctcaaaatctctcttcaaatgagcaggaaattagtaaatg
gtgatggtttgacagccacatgaagagggcaagggtaatctaaagaaggt
actttctaccctcttccagtcagtgtatcaagcggaaaaattaaatccag
taccagagctttggattttaaaagaataggtgtaagtaagttgcttagaa
aggaatttaaaagtgttaaaaaaaaaaaaagcctctgaaaaaaactgagc
aggccaacaatctcgtttggtggataatccatctcattgctggattgttc
cctggtcccggtctcctgtctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72610143_72611362
seq2: B6Ng01-151F12.b_46_1243

seq1  GAATTCAAAATTTTGTATTTTTCTCTCAAAAAGGTATAATTTACCATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTTTGTATTTTTCTCTCAAAAAGGTATAATTTACCATTCA  50

seq1  TATAGTTATCTAATATATTATGACCAGACTGAAAATTACACATTTGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTATCTAATATATTATGACCAGACTGAAAATTACACATTTGTGAA  100

seq1  TGACTGTAATTGTTTCTATGAATCCCTTCCTAAAGGTACCTCTTCAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTAATTGTTTCTATGAATCCCTTCCTAAAGGTACCTCTTCAGATC  150

seq1  AGATGTCTGACCCTGCATTAAAGACCTCTAAGCACTGCATTTTCTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTGACCCTGCATTAAAGACCTCTAAGCACTGCATTTTCTTCTCT  200

seq1  TTTTTTTCCTTTTGATTATTTCACTTATTTGCATTTCAAATGTTATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCTTTTGATTATTTCACTTATTTGCATTTCAAATGTTATTCCC  250

seq1  CTTTCCTGGTTTCCCCTCTGCAAACCCCTATCCCATCCCCCTCTCCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGGTTTCCCCTCTGCAAACCCCTATCCCATCCCCCTCTCCCTGC  300

seq1  TTCTATGAGGGTGTTCCCCCCCACACACCCCCACTCCTGCCTCACTACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAGGGTGTTCCCCCCCACACACCCCCACTCCTGCCTCACTACCC  350

seq1  TGGTATTCCCCTACACTGGGGCATTGACCCTTCACAGGATCAAGGGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCCCCTACACTGGGGCATTGACCCTTCACAGGATCAAGGGCCTC  400

seq1  TCCTCCTACTGATGTCTGACAAGGCCATCATCAGCTACATACAAAGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTACTGATGTCTGACAAGGCCATCATCAGCTACATACAAAGTTGA  450

seq1  ACATCAAAGCATCTATTTTGAGTGAGACAGTTATTCTTGAAGTGAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAGCATCTATTTTGAGTGAGACAGTTATTCTTGAAGTGAATGGA  500

seq1  GTAAAATTAGATATGGTTACAGAGAAGGAAAATATTTTCTTGCTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTAGATATGGTTACAGAGAAGGAAAATATTTTCTTGCTTTTTTT  550

seq1  TCCCCTCCCAAAATGTCATTTTGAATTTTTTCCCTCCTTGTACTATACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCCAAAATGTCATTTTGAATTTTTTCCCTCCTTGTACTATACAA  600

seq1  AGATCATACATCCATTTCTTATGAAGAACAGGTTCAGTGAATCAATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATACATCCATTTCTTATGAAGAACAGGTTCAGTGAATCAATTAAT  650

seq1  TAAATTTTCCTTATGCAGCTCTGGTTTAACAGTATAAAAGCTTTTTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTCCTTATGCAGCTCTGGTTTAACAGTATAAAAGCTTTTTCTTC  700

seq1  TCCTTTAAAGATACTTGCTAATAGAAGGACTGCTTACTTCTTCCAAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAGATACTTGCTAATAGAAGGACTGCTTACTTCTTCCAAGGTT  750

seq1  ATATTTAGACACTTGACAGGGTCACGGGGCTCATGCCCAGTGTTCCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGACACTTGACAGGGTCACGGGGCTCATGCCCAGTGTTCCATGC  800

seq1  CCGGTACACAGACCTTTGTGATCAAAATCACCCTACAGCGTAACACCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTACACAGACCTTTGTGATCAAAATCACCCTACAGCGTAACACCAAA  850

seq1  GCTACTCTCTCTTTCCCAATTTGTGTCACCGTGTGGAATGAAATAAAAAA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCTACTCTCTCTTTCCC-ATTTGTGTCACCGTGTGGAATGAAATAAAAAA  899

seq1  AAAATCACAAATCCTTCCAGGGAGACAACAGTGCCAGAAGGACACCCATC  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATCACAAATCCCTCCAGGGAGACAACAGTGCCAGAAGGACACCCATC  949

seq1  ATTTCTCAATATGAGAAACAGTAGGATGGAAGAGGGGAATCAGAGTCCAT  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTTCTCAATATGAGAAACAGTAGGATGGGAGAGGGGAATCAGAGTCCAT  999

seq1  ACCTGGGGAGTGCATTGGCAGAGAAGATA-TATCTTATTCTTGTTGCAAT  1049
      ||||||||||||||||||||||||||||| |||| |||||||||||| ||
seq2  ACCTGGGGAGTGCATTGGCAGAGAAGATATTATC-TATTCTTGTTGC-AT  1047

seq1  TCCCTATTTTCTATTCTTTTTCTTTAAACCCAAATCTTCTG-ATTATAG-  1097
      ||||||||   | | |        ||||||| |||| |||| ||||||| 
seq2  TCCCTATTCAATCTGC--------TAAACCC-AATC-TCTGAATTATAGA  1087

seq1  ATAGTATTCTAGAGGTTGAGATTAAGAGAAAGAAGATTGCAATATGCCTT  1147
      |||||||||||||||||| || || |||     ||||||||||||| |||
seq2  ATAGTATTCTAGAGGTTG-GA-TAGGAG-----AGATTGCAATATG-CTT  1129

seq1  TAAAACAAGAAAAAGAGGAAAGCAGTATGT-ATGCAGTGATCTAATTGAC  1196
      | ||||| |||||| ||| |||| |||||| |||| |||||||||| |||
seq2  TTAAACAGGAAAAA-AGG-AAGCCGTATGTAATGC-GTGATCTAATGGAC  1176

seq1  TAGACTTCAGAAAACCGGGACAGA  1220
      ||||  || | ||  |||||||||
seq2  TAGAACTCTGTAA--CGGGACAGA  1198


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