BAC Information

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BAC

Clone NameB6Ng01-151K23
Chromosome10 (Build37)
Map Location 129,018,561 - 129,121,482
singlet/doubletdoublet
Overlap geneOlfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802
Upstream geneErbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739
Downstream geneOlfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151K23.bB6Ng01-151K23.g
ACCDH947444DH947445
length1,146727
definitionDH947444|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K23, 5' end.DH947445|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,018,561 - 129,019,491)(129,120,762 - 129,121,482)
sequence
gaattctcaacagagtaatctcaaatggctgagattcattcaacatcctt
agtcactgggaaatgcaaatcaaaatgaccctgagattctaccttttacc
aattaggatggttaagatcaaaaactcaaatgacagcacatgctagcaag
aatatggagaaagaggaacactcctccattgctgctgggattgcaaactt
gtacaaccacgctggaaatcaatctggcagttcctcaaaaaattggaaat
agttctacctaaagactcagctctaccactcctgggcatatatatttaaa
agatgcttcaccttctcacaagaatatatgttccactatgttcatagcag
ccttatttgtaatagccagaaactggaaacaacccagatgtccatcaaat
gaagaatggataaagaatgtgtggtgatttacacaatagatttctattca
gctactaaaaatgaggacatagtgtgttttttttaggcaaatggatgaaa
ctagaaaatatcatcctgagcaagtcaatccagacccaataggacgcaca
tagatgataggtggatattagccaaaaaatacagaatatccatggtacaa
cctacagttcataagaagtttaagaagaagtaatgctcaagtgatgatgc
ttcaatcccacttagaagagggaagataataatcacagaaggcagagtga
gggaaagacctaagtcatgtgctgtgcgatgcttaaaattatcttttatt
acccttttctagtttaatttacatgtacttatatcctacaagaggttttt
ttccctatccttatattcttattttatatttcttcttcatctagccccat
tctttattctttcatttcaaatgaattttagggtaatagctgattctaca
ttgtacttgccttttctcataaagctatagatgagtggctggtaactttt
attaattgattatattttatttatagtttgatattcatgctcttttcctc
tatgagagtacttcacaatgagccctacaaagaagactaattcttcatcc
aaataaaaacaaagtaggtggcctatcagtagttgtttaatccacagaac
gaaatgtaagaaatattgaaaatgccaaacaacattaaggaagaga
gaattcactatgtcacttaggaattaggacttgaaaaaggacaaagttgt
ggaatctattgacaggaatgaatgtaagggttttttttgttgttgttgtt
ttggttttggttttgggggttttgagggtttttttttttaatgtcataat
gaagtccactattttgtacaattaatatacaattttttaaaaagggaaga
gaggcttcccaattctgagttcatcacagaggtaaaatgctcaggccatc
tgaaaaaaaatttgattgaagatcaatttttggacatgggaaaagcaaga
tagagttcgtgaagccactgaaggttacataaacaactgaacagcaaagc
ccatcaacagggacttggagaaattagcaaaacaaatgttaaatcctgag
gagcagcaaaaagaacccattttagcagccagaaagatttccttttctct
gtattcaaaaatgattgtttttatggacaagagtgattgtgggtaatttc
tactcagtttttttgtttgtttgtttttgttttttatttgtttgttggtt
tgttttcttgggttttggttgtgttctatttttgtttattgctgtagcat
tttttttaattagatattttctttatttatatttcaaatgttatccccct
ttcttggtttcccctcagaaaaacccctctatctctctcatattccccct
gctcgccaacccacccactcacataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129018561_129019491
seq2: B6Ng01-151K23.b_264_1191

seq1  TCAATCTGGCAGTTCCTCAAAAAATTGGAAATAGTTCTACCTAAAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGGCAGTTCCTCAAAAAATTGGAAATAGTTCTACCTAAAGACTC  50

seq1  AGCTCTACCACTCCTGGGCATATATATTTAAAAGATGCTTCACCTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTACCACTCCTGGGCATATATATTTAAAAGATGCTTCACCTTCTCA  100

seq1  CAAGAATATATGTTCCACTATGTTCATAGCAGCCTTATTTGTAATAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATATATGTTCCACTATGTTCATAGCAGCCTTATTTGTAATAGCCA  150

seq1  GAAACTGGAAACAACCCAGATGTCCATCAAATGAAGAATGGATAAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGAAACAACCCAGATGTCCATCAAATGAAGAATGGATAAAGAAT  200

seq1  GTGTGGTGATTTACACAATAGATTTCTATTCAGCTACTAAAAATGAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGATTTACACAATAGATTTCTATTCAGCTACTAAAAATGAGGAC  250

seq1  ATAGTGTGTTTTTTTTAGGCAAATGGATGAAACTAGAAAATATCATCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGTTTTTTTTAGGCAAATGGATGAAACTAGAAAATATCATCCTG  300

seq1  AGCAAGTCAATCCAGACCCAATAGGACGCACATAGATGATAGGTGGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCAATCCAGACCCAATAGGACGCACATAGATGATAGGTGGATAT  350

seq1  TAGCCAAAAAATACAGAATATCCATGGTACAACCTACAGTTCATAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAAAAAATACAGAATATCCATGGTACAACCTACAGTTCATAAGAAG  400

seq1  TTTAAGAAGAAGTAATGCTCAAGTGATGATGCTTCAATCCCACTTAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGAAGTAATGCTCAAGTGATGATGCTTCAATCCCACTTAGAAG  450

seq1  AGGGAAGAAAATAATCACAGAAGGCAGAGTGAGGGAAAGACCTAAGTCAT  500
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGATAATAATCACAGAAGGCAGAGTGAGGGAAAGACCTAAGTCAT  500

seq1  GTGCTGTGCGATGCTTAAAATTATCTTTTATTACCCTTTTCTAGTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGCGATGCTTAAAATTATCTTTTATTACCCTTTTCTAGTTTAAT  550

seq1  TTACATGTACTTATATCCTACAAGAGGTTTTTTTCCCTATCCTTATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTACTTATATCCTACAAGAGGTTTTTTTCCCTATCCTTATATTC  600

seq1  TTATTTTATATTTCTTCTTCATCTAGCCCCATTCTTTATTCTTTCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATATTTCTTCTTCATCTAGCCCCATTCTTTATTCTTTCATTTC  650

seq1  AAATGAATTTTAGGGTAATAGCTGATTCTACATTGTACTTGCCTTTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTTTAGGGTAATAGCTGATTCTACATTGTACTTGCCTTTTCTC  700

seq1  ATAAAGCTATAGATGAGGTGGCTGGTAACTTTTATTAATTGATTATATTT  750
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  ATAAAGCTATAGATGA-GTGGCTGGTAACTTTTATTAATTGATTATA-TT  748

seq1  TTATTTATAGTTTGATATTCATGCTCTTTTTCCTCTATGAGAAGTACTTC  800
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TTATTTATAGTTTGATATTCATGCTC-TTTTCCTCTATGAG-AGTACTTC  796

seq1  ACAATGAGCCCTACAAAGAAGACTAATTCTTCATCCAAATAAAAACAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGCCCTACAAAGAAGACTAATTCTTCATCCAAATAAAAACAAAG  846

seq1  TAGGTGCCTAATCCAGTAGTTGTATAAATCACAGAACAGAAATGTAAGAA  900
      |||||| |  || |||||||||| |||  |||||||| ||||||||||||
seq2  TAGGTGGCCTAT-CAGTAGTTGTTTAATCCACAGAAC-GAAATGTAAGAA  894

seq1  ATA-TGAAAATGCAAAACAAACATTA---AAGAGA  931
      ||| ||||||||| |||| |||||||   ||||||
seq2  ATATTGAAAATGCCAAAC-AACATTAAGGAAGAGA  928

seq1: chr10_129120762_129121482
seq2: B6Ng01-151K23.g_69_795 (reverse)

seq1  TCTATGTGAGTGGGTGGGTTGGCGAGCAGGGGGAGT-TGGGAGGGGATAG  49
      |||||||||||||||||||||||||||||||||| | || || | |||||
seq2  TCTATGTGAGTGGGTGGGTTGGCGAGCAGGGGGAATATGAGA-GAGATAG  49

seq1  -GGGGTTTTTCTGAGGGGAAACCAAGAAA-GGGGATAACATTTGAAATAT  97
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGGGTTTTTCTGAGGGGAAACCAAGAAAGGGGGATAACATTTGAAATAT  99

seq1  AAATAAAGAAAATATCTAATT-AAAAAAATGCTACAGCAATAAAC-AAAA  145
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  AAATAAAGAAAATATCTAATTAAAAAAAATGCTACAGCAATAAACAAAAA  149

seq1  TAGAACACAACCAAAA-CCAAGAAAACAAACCAACAAACAAATAAAAAAC  194
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAGAACACAACCAAAACCCAAGAAAACAAACCAACAAACAAATAAAAAAC  199

seq1  AAAAACAAACAAACAAAAAAACTGAGTAGAAATTACCCACAATCACTCTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAAAAAACTGAGTAGAAATTACCCACAATCACTCTT  249

seq1  GTCCAT-AAAACAATCATTTTTGAATACAGAGAAAAGGAAATCTTTCTGG  293
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAAAAACAATCATTTTTGAATACAGAGAAAAGGAAATCTTTCTGG  299

seq1  CTGCTAAAATGGGTTCTTTTTGCTGCTCCTCAGGATTTAACATTTGTTTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAAATGGGTTCTTTTTGCTGCTCCTCAGGATTTAACATTTGTTTT  349

seq1  GCTAATTTCTCCAAGTCCCTGTTGATGGGCTTTGCTGTTCAGTTGTTTAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTTCTCCAAGTCCCTGTTGATGGGCTTTGCTGTTCAGTTGTTTAT  399

seq1  GTAACCTTCAGTGGCTTCACGAACTCTATCTTGCTTTTCCCATGTCCAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTTCAGTGGCTTCACGAACTCTATCTTGCTTTTCCCATGTCCAAA  449

seq1  AATTGATCTTCAATCAAATTTTTTTTCAGATGGCCTGAGCATTTTACCTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATCTTCAATCAAATTTTTTTTCAGATGGCCTGAGCATTTTACCTC  499

seq1  TGTGATGAACTCAGAATTGGGAAGCCTCTCTTCCCTTTTTAAAAAATTGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAACTCAGAATTGGGAAGCCTCTCTTCCCTTTTTAAAAAATTGT  549

seq1  ATATTAATTGTACAAAATAGTGGACTTCATTATGACATTAAAAAAAAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATTGTACAAAATAGTGGACTTCATTATGACATTAAAAAAAAAAA  599

seq1  CCCTCAAAACCCCCAAAACCAAAACCAAAACAACAACAACAAAAAAAACC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAAAACCCCCAAAACCAAAACCAAAACAACAACAACAAAAAAAACC  649

seq1  CTTACATTCATTCCTGTCAATAGATTCCACAACTTTGTCCTTTTTCAAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTCATTCCTGTCAATAGATTCCACAACTTTGTCCTTTTTCAAGT  699

seq1  CCTAATTCCTAAGTGACATAGTGAATTC  721
      ||||||||||||||||||||||||||||
seq2  CCTAATTCCTAAGTGACATAGTGAATTC  727