BAC Information

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BAC

Clone NameB6Ng01-151N03
Chromosome10 (Build37)
Map Location 112,731,879 - 112,892,039
singlet/doubletdoublet
Overlap genenone
Upstream geneKcnc2, LOC100042639, 4921506J03Rik
Downstream geneLOC100042655, LOC100042666, Trhde
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151N03.bB6Ng01-151N03.g
ACCDH947545DH947546
length9291,112
definitionDH947545|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N03, 5' end.DH947546|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,891,118 - 112,892,039)(112,731,879 - 112,733,001)
sequence
gaattccaagctttggttgggaaaatactgtgtttaaaaaaaatatgaaa
aataatttacctaagtaaatgagtaaataaataagtttggtttgataaag
tacttgttggaatataaggggtgagggaacaatgaggaaaaattagatat
cacagacaatacatgtgtaattcagtgttttatgtctgcagccaagtgag
taagagcatacataatctggtagaattttaatgaaagcatggtaaaatat
tcgtggtcacccttgaccttcccatggcaaccagcgttttcttcttctgt
gacactatggtcatttttggacatttcaaaaatcctctgccttaatcaca
ctgaagaaactgatttagaaatacattattttgtaataaaccctgcaatc
accaaatcaaatacactgcttatgaggttagtcaacataaacaatacaat
atcttctctggaggaaggactcattgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgcttacattctgctccaggtcattctatatctatatacaat
actgcattataaaacacattaaagtataccctgagaggtgcatcagtcat
gttgaaggaggtcctttgctgaagctcaactgagcttagatatgaagaac
ctaatgaaatgggaaatgagtaataaaacatcccaaagactgaaaataaa
ggaaactatacaccaccatacagcaaggctcacaggcagcccctattacc
actatttcatctccaagattcttctttttagaactactctttatatccta
gaacaagggctctttctgtagccttttatttttctcagatataaccactg
aaatttgttatcccatcgtgcatagtgttagatttggattctattaaggg
catggttctattatcctaaaatcactgat
gaattccagaccatgatctatactaacagtgaagtaattgtatttaggga
tgtggtcttcaactactggatctgtccacacacagacatatgcagttaag
aacagctatgtcagcagcctaacagaattataaccttaatacattatgag
ttactgttttgaaattttaccttataactcaatacatggttctcaaatgt
gaatattgttcatgacagtgttatattaaaaatagctaaaggttgaacat
gtcggtaagaatgaatcggaaaaaaaggataaagttgtaaatatcaaaga
gttattgttttaataactggaatataaggcagatgatagcttacatttta
aatcctaaactcaggaagtgaggcaggaggattacctgttcaaggttatc
cagggctatatagcaatacacactatcctaggcaaacaaactacctaaac
agtgaacaagaaaaataattaaacactttatatttaatagcacactaaca
ttctgaactacaaaactgtataaataaaatactaaatttaaaggttagaa
tgtaatctgatgtactgaaaatcacatagacttaaaccacattctgtagg
ataaaaataagattcagattatttactatcaaaacattgaagaagaaaga
agatgctctccataaacccactgagaagaacaaagctgtatcactaactc
atcttttttttgaaatccaaacctttcaagttctaaagcaatcaagaata
gtgcaagaaaatagattaaggaacagtttcctctcatatatacataccca
atgtctaatagaacggtttaacagtacattaaaatgttaattcattaata
gattgtattcatcttttgaatttcttgttgtgattacccagagaaaattc
atctaatacattatcaatgacacaaatcagaaaaatatatattatctaag
ttgaacaataaatgatgtgctcagctttatatttagagactttggaacta
tagcacttgccatttcattcagctgcaaagctcatagcagttctggtagg
catctccactaagtgtttaaataacatattcatgtcattgaaatggagtt
taagtctcctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112891118_112892039
seq2: B6Ng01-151N03.b_48_976 (reverse)

seq1  ATCAGTGA-TTTAGGATATTAGAAACAATGCCTTAATAGAAT-CAAATCT  48
      |||||||| ||||||||| ||||| ||   |||||||||||| |||||||
seq2  ATCAGTGATTTTAGGATAATAGAACCATGCCCTTAATAGAATCCAAATCT  50

seq1  AACACTATGCACGAT-GGAT-ACAAATTTCAGTGGTTATATCTGAG-AAA  95
      ||||||||||||||| |||| ||||||||||||||||||||||||| |||
seq2  AACACTATGCACGATGGGATAACAAATTTCAGTGGTTATATCTGAGAAAA  100

seq1  ATAAAAGGCTACAG-AAGAGCCTTTGTTCTAGGATATAAAGAGTAGTTCT  144
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  ATAAAAGGCTACAGAAAGAGCCCTTGTTCTAGGATATAAAGAGTAGTTCT  150

seq1  AAAAAGAAGAATCTTGGAGATG-AATAGTGGTAATAGGGGCTGCCTGTGA  193
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAAAGAAGAATCTTGGAGATGAAATAGTGGTAATAGGGGCTGCCTGTGA  200

seq1  GCCTTGCTGTATGGTGGTGTATAGTTTCCTTTATTTTCAGTCTTTGGGAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTGTATGGTGGTGTATAGTTTCCTTTATTTTCAGTCTTTGGGAT  250

seq1  GTTTTATTACTCATTTCCCATTTCATTAGGTTCTTCATATCTAAGCTCAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTACTCATTTCCCATTTCATTAGGTTCTTCATATCTAAGCTCAG  300

seq1  TTGAGCTTCAGCAAAGGACCTCCTTCAACATGACTGATGCACCTCTCAGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTCAGCAAAGGACCTCCTTCAACATGACTGATGCACCTCTCAGG  350

seq1  GTATACTTTAATGTGTTTTATAATGCAGTATTGTATATAGATATAGAATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTTTAATGTGTTTTATAATGCAGTATTGTATATAGATATAGAATG  400

seq1  ACCTGGAGCAGAATGTAAGCACACACACACACACACACACACACACACAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGCAGAATGTAAGCACACACACACACACACACACACACACACAC  450

seq1  ACACAATGAGTCCTTCCTCCAGAGAAGATATTGTATTGTTTATGTTGACT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGAGTCCTTCCTCCAGAGAAGATATTGTATTGTTTATGTTGACT  500

seq1  AACCTCATAAGCAGTGTATTTGATTTGGTGATTGCAGGGTTTATTACAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCATAAGCAGTGTATTTGATTTGGTGATTGCAGGGTTTATTACAAA  550

seq1  ATAATGTATTTCTAAATCAGTTTCTTCAGTGTGATTAAGGCAGAGGATTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATTTCTAAATCAGTTTCTTCAGTGTGATTAAGGCAGAGGATTT  600

seq1  TTGAAATGTCCAAAAATGACCATAGTGTCACAGAAGAAGAAAACGCTGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTCCAAAAATGACCATAGTGTCACAGAAGAAGAAAACGCTGGT  650

seq1  TGCCATGGGAAGGTCAAGGGTGACCACGAATATTTTACCATGCTTTCATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGGGAAGGTCAAGGGTGACCACGAATATTTTACCATGCTTTCATT  700

seq1  AAAATTCTACCAGATTATGTATGCTCTTACTCACTTGGCTGCAGACATAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTACCAGATTATGTATGCTCTTACTCACTTGGCTGCAGACATAA  750

seq1  AACACTGAATTACACATGTATTGTCTGTGATATCTAATTTTTCCTCATTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAATTACACATGTATTGTCTGTGATATCTAATTTTTCCTCATTG  800

seq1  TTCCCTCACCCCTTATATTCCAACAAGTACTTTATCAAACCAAACTTATT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCACCCCTTATATTCCAACAAGTACTTTATCAAACCAAACTTATT  850

seq1  TATTTACTCATTTACTTAGGTAAATTATTTTTCATATTTTTTTTAAACAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTCATTTACTTAGGTAAATTATTTTTCATATTTTTTTTAAACAC  900

seq1  AGTATTTTCCCAACCAAAGCTTGGAATTC  922
      |||||||||||||||||||||||||||||
seq2  AGTATTTTCCCAACCAAAGCTTGGAATTC  929

seq1: chr10_112731879_112733001
seq2: B6Ng01-151N03.g_67_1178

seq1  GAATTCCAGACCATGATCTATACTAACAGTGAAGTAATTGTATTTAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACCATGATCTATACTAACAGTGAAGTAATTGTATTTAGGGA  50

seq1  TGTGGTCTTCAACTACTGGATCTGTCCACACACAGACATATGCAGTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCTTCAACTACTGGATCTGTCCACACACAGACATATGCAGTTAAG  100

seq1  AACAGCTATGTCAGCAGCCTAACAGAATTATAACCTTAATACATTATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTATGTCAGCAGCCTAACAGAATTATAACCTTAATACATTATGAG  150

seq1  TTACTGTTTTGAAATTTTACCTTATAACTCAATACATGGTTCTCAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTTTGAAATTTTACCTTATAACTCAATACATGGTTCTCAAATGT  200

seq1  GAATATTGTTCATGACAGTGTTATATTAAAAATAGCTAAAGGTTGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGTTCATGACAGTGTTATATTAAAAATAGCTAAAGGTTGAACAT  250

seq1  GTCGGTAAGAATGAATCGGAAAAAAAGGATAAAGTTGTAAATATCAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTAAGAATGAATCGGAAAAAAAGGATAAAGTTGTAAATATCAAAGA  300

seq1  GTTATTGTTTTAATAACTGGAATATAAGGCAGATGATAGCTTACATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGTTTTAATAACTGGAATATAAGGCAGATGATAGCTTACATTTTA  350

seq1  AATCCTAAACTCAGGAAGTGAGGCAGGAGGATTACCTGTTCAAGGTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAACTCAGGAAGTGAGGCAGGAGGATTACCTGTTCAAGGTTATC  400

seq1  CAGGGCTATATAGCAATACACACTATCCTAGGCAAACAAACTACCTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTATATAGCAATACACACTATCCTAGGCAAACAAACTACCTAAAC  450

seq1  AGTGAACAAGAAAAATAATTAAACACTTTATATTTAATAGCACACTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACAAGAAAAATAATTAAACACTTTATATTTAATAGCACACTAACA  500

seq1  TTCTGAACTACAAAACTGTATAAATAAAATACTAAATTTAAAGGTTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACTACAAAACTGTATAAATAAAATACTAAATTTAAAGGTTAGAA  550

seq1  TGTAATCTGATGTACTGAAAATCACATAGACTTAAACCACATTCTGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCTGATGTACTGAAAATCACATAGACTTAAACCACATTCTGTAGG  600

seq1  ATAAAAATAAGATTCAGATTATTTACTATCAAAACATTGAAGAAGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAGATTCAGATTATTTACTATCAAAACATTGAAGAAGAAAGA  650

seq1  AGATGCTCTCCATAAACCCACTGAGAAGAACAAAGCTGTATCACTAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCTCCATAAACCCACTGAGAAGAACAAAGCTGTATCACTAACTC  700

seq1  ATCTTTTTTTTGAAATCCAAACCTTTCAAGTTCTAAAGCAATCAAGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTTTGAAATCCAAACCTTTCAAGTTCTAAAGCAATCAAGAATA  750

seq1  GTGCAAGAAAATAGATTAAGGAACAGTTTCCTCTCATATATACATACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGAAAATAGATTAAGGAACAGTTTCCTCTCATATATACATACCCA  800

seq1  ATGTCTAATAGAACGGTTTAACAGTACATTAAAATGTTAATTCATTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAATAGAACGGTTTAACAGTACATTAAAATGTTAATTCATTAATA  850

seq1  GATTGTATTCATCTTTTGAATTTCTTGTTGTGATTACCCAGAGAAAATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTATTCATCTTTTGAATTTCTTGTTGTGATTACCCAGAGAAAATTC  900

seq1  ATCTAATACATTATCAATGAACACAAATCAGAAAAATATATATTATCTAA  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCTAATACATTATCAATG-ACACAAATCAGAAAAATATATATTATCTAA  949

seq1  GTTGAACAAATAAATGATGTGCTCAGCTTTATAATTTAGAGACTTTTGGA  1000
      ||||||| |||||||||||||||||||||||| |||||||||| ||||||
seq2  GTTGAAC-AATAAATGATGTGCTCAGCTTTAT-ATTTAGAGAC-TTTGGA  996

seq1  ACTTATAGCACTTGCCATTTCATTCCAAGCTGCAAAGCTCATAGCAGTAT  1050
      || ||||||||||||||||||||||  ||||||||||||||||||||| |
seq2  AC-TATAGCACTTGCCATTTCATTC--AGCTGCAAAGCTCATAGCAGT-T  1042

seq1  CTGGTAAGCAATCTCCCACTAAGTGTATAAATTAACATATTCATGTCATG  1100
      |||||| || |||| ||||||||||| |||| ||||||||||||||||| 
seq2  CTGGTAGGC-ATCT-CCACTAAGTGTTTAAA-TAACATATTCATGTCATT  1089

seq1  AAAATGAAGTTTAAGTCTCCTCA  1123
       ||||| ||||||||||||||||
seq2  GAAATGGAGTTTAAGTCTCCTCA  1112