BAC Information

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BAC

Clone NameB6Ng01-152E19
Chromosome10 (Build37)
Map Location 108,292,606 - 108,293,680
singlet/doubletsinglet
Overlap geneSyt1
Upstream geneEG628870, Ppp1r12a, Pawr, EG667814, EG368203
Downstream geneNav3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152E19.bB6Ng01-152E19.g
ACCDH947907DH947908
length1,0691,085
definitionDH947907|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E19, 5' end.DH947908|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttcaaaccaaaccacagagcactgacttccatttgatactc
atagaatgtacaaattgattttttccccattaaatgtatacatctatgag
gcgataattttttctgaccctgacaccctgagtaaataatttaattgatt
tcagttctggaaagctgacctcttcagagtgtaaggtatcctttcttgta
aagttataaatagaaacgaacatcggttttccactgaaatacaattacaa
ctgaaatgacagtggtttctctgaggacagctatttaaatagggctagtt
gaacttcaatggaaagtattctgttgggagacagagtagatgtggttcaa
ttcaacattcatacagtggacaggcttagttcagaaacgacatagtggac
acgccttaattcagagaccacacagtggttgtggtttacttctagaaaca
agtataatatcagagtcagaaaacctaaagcctcagccatcatttcagtc
ttttctctggacagatatgtgagaaaattcactccttacaccctacttca
cgcagatggtgtgaatgaaagagtataaatatttgatgtgttcgagcgga
aggtgtacgtgctgtcttgaacttgctgtctcattagcactgtgtggaag
atacacacatgcaaataacagcatcaggccgtattagtccaatgtgcctc
agtgaagggagggctctcttctgacccaattaatcttgatttgggaaaag
tgcctgataaattatttccaaggacaggaggcaccacggctcattgaact
ttgttttcatcttacacagactggggatttcctatgtgaccttggcaaag
tcatttcactgcatcttaccatagattttattttgtttaattttattttg
aatttggaagtgttgattgattctggcctttgggacttggaataataaac
attggcagatgaatatatgggtgtggagttgtgcaagtattgatacacag
gatcaaaaatggtgcctataactataaagtgtcattcgataagcattcgg
acagactgcctcctgtgga
gaattctttgtttctatctataccccattttgtaattgaggtattttttt
cttgatatcaattttagtcagatttttaaaaatatattctagatattagc
cctcaatcagaatttaattggtaaatatctcttccctttctgtagactgc
tgcttttacaaatgatgaggtcttttgccatgcaaaagattttcaatttc
atgaaatcccatttattaattgttgggtttagtgcctgtgctaatggtat
tctgtgtagaaagccttttactgtgccggtgaggtcaaggctatttccca
cttcctatactatcaggttcaacatatttggttttatgtggaggtctttg
attcatatggtgttggcctattattgaatgtgagatactgcagtcaccca
gtatcaatgtatgagcgtcaatttgtgatttaagggcatcttttataaat
ttgtgttcccttgtatttggtacatagatgctaaggattgaagtatcctc
ttggtgggatttttcctttgataaatgtgattttttgagtatatttggcc
tatagggattcatgtgtttggatggttgaccatagggagtggtgctatta
ggatgtataaccttgctgaaggaagtgtgtctcttttgtaggaggctttt
gaggcctcctacgctcaggctctgcccagtgcagaagagagcttcttcct
ggctgctttttggaccaagatgtagaattattgcctgctccaacatcagt
ctgcctggatgctgccatacttcccaccataatgataatgaactaaacct
ctaaaatgaaagccagccccaattaaatgctgtcctttataagattgcct
tagtatggtgtctcttcagagaaatgacaccctaagacaatactatgtag
tgtccctctccatctcttctgattgtttttgtttgaaatctatttgtgac
atattgaatggctacacagcttgcttctatgctacttgctgggaatatta
ttccatcttttaccctaggaaatggtatcttaagcacgaggctcctggat
ataaggaaaaaaggactcgattatcaacaatccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108292606_108293680
seq2: B6Ng01-152E19.b_48_1116

seq1  GAATTCCATTTCAAACCAAACCACAGAGCACTGACTTCCATTTGATACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTCAAACCAAACCACAGAGCACTGACTTCCATTTGATACTC  50

seq1  ATAGAATGTACAAATTGATTTTTTCCCCATTAAATGTATACATCTATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGTACAAATTGATTTTTTCCCCATTAAATGTATACATCTATGAG  100

seq1  GCGATAATTTTTTCTGACCCTGACACCCTGAGTAAATAATTTAATTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATAATTTTTTCTGACCCTGACACCCTGAGTAAATAATTTAATTGATT  150

seq1  TCAGTTCTGGAAAGCTGACCTCTTCAGAGTGTAAGGTATCCTTTCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTGGAAAGCTGACCTCTTCAGAGTGTAAGGTATCCTTTCTTGTA  200

seq1  AAGTTATAAATAGAAACGAACATCGGTTTTCCACTGAAATACAATTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATAAATAGAAACGAACATCGGTTTTCCACTGAAATACAATTACAA  250

seq1  CTGAAATGACAGTGGTTTCTCTGAGGACAGCTATTTAAATAGGGCTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGACAGTGGTTTCTCTGAGGACAGCTATTTAAATAGGGCTAGTT  300

seq1  GAACTTCAATGGAAAGTATTCTGTTGGGAGACAGAGTAGATGTGGTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAATGGAAAGTATTCTGTTGGGAGACAGAGTAGATGTGGTTCAA  350

seq1  TTCAACATTCATACAGTGGACAGGCTTAGTTCAGAAACGACATAGTGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATTCATACAGTGGACAGGCTTAGTTCAGAAACGACATAGTGGAC  400

seq1  ACGCCTTAATTCAGAGACCACACAGTGGTTGTGGTTTACTTCTAGAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTTAATTCAGAGACCACACAGTGGTTGTGGTTTACTTCTAGAAACA  450

seq1  AGTATAATATCAGAGTCAGAAAACCTAAAGCCTCAGCCATCATTTCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAATATCAGAGTCAGAAAACCTAAAGCCTCAGCCATCATTTCAGTC  500

seq1  TTTTCTCTGGACAGATATGTGAGAAAATTCACTCCTTACACCCTACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGGACAGATATGTGAGAAAATTCACTCCTTACACCCTACTTCA  550

seq1  CGCAGATGGTGTGAATGAAAGAGTATAAATATTTGATGTGTTCGAGCGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGATGGTGTGAATGAAAGAGTATAAATATTTGATGTGTTCGAGCGGA  600

seq1  AGGTGTACGTGCTGTCTTGAACTTGCTGTCTCATTAGCACTGTGTGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACGTGCTGTCTTGAACTTGCTGTCTCATTAGCACTGTGTGGAAG  650

seq1  ATACACACATGCAAATAACAGCATCAGGCCGTATTAGTCCAATGTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATGCAAATAACAGCATCAGGCCGTATTAGTCCAATGTGCCTC  700

seq1  AGTGAAGGGAGGGCTCTCTTCTGACCCAATTAATCTTGATTTGGGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGGAGGGCTCTCTTCTGACCCAATTAATCTTGATTTGGGAAAAG  750

seq1  TGCCTGATAAATTATTTCCAAGGACAGGAGGCACCACGGCTCATTGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATAAATTATTTCCAAGGACAGGAGGCACCACGGCTCATTGAACT  800

seq1  TTGTTTTCATCTTACACAGACTGGGGATTTCCTATGTGACCTTGGCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCATCTTACACAGACTGGGGATTTCCTATGTGACCTTGGCAAAG  850

seq1  TCATTTCACTGCATCTTACCATAGATTTTATTTTGTTTAATTTTATTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCACTGCATCTTACCATAGATTTTATTTTGTTTAATTTTATTTTG  900

seq1  AATTTGGAAGTGTTGATTGATTCTGGCCTTTGGGACTTGGAATAATAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAAGTGTTGATTGATTCTGGCCTTTGGGACTTGGAATAATAAAC  950

seq1  ATTGGCAGGATGAATTATATGGGTGT-GAG-TGTGCAAAGTATTGATACA  998
      ||||||| |||||| ||||||||||| ||| ||||| |||||||||||||
seq2  ATTGGCA-GATGAA-TATATGGGTGTGGAGTTGTGC-AAGTATTGATACA  997

seq1  CAGGATCAAAAATGGTGGCATATAAACTATTACAGTGTCATTCAGATAAG  1048
      |||||||||||||||| || ||| ||||| || |||||||||| ||||||
seq2  CAGGATCAAAAATGGT-GCCTAT-AACTA-TAAAGTGTCATTC-GATAAG  1043

seq1  CATCAGGACAGACTGCCTTCTTGTGGA  1075
      |||  |||||||||||| || ||||||
seq2  CATTCGGACAGACTGCC-TCCTGTGGA  1069