BAC Information

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BAC

Clone NameB6Ng01-152G06
Chromosome10 (Build37)
Map Location 123,472,359 - 123,581,444
singlet/doubletdoublet
Overlap genenone
Upstream geneMon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G06.bB6Ng01-152G06.g
ACCDH947975DH947976
length7461,115
definitionDH947975|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G06, 5' end.DH947976|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,580,700 - 123,581,444)(123,472,359 - 123,473,474)
sequence
gaattcagtgcagttttatgaatcactcctgctcccctgcatataataaa
cttgaagtgggacgggggctggggggtgggaaacgaaggagcagaaaact
aatttgaatggactgtggggttaagagtttgtttggtatgtttgacaggt
aaattggaaagataatggcataagtgcagttgtgtaaggactggaatata
aatagctctcacaagagggaaggctttgcaaaaatgaaatgaagtaagtt
ccagttgtcaggacagaaactccaactcaattagcaggagcgcctttgtt
gattctaagcctggctctggtttggtgaatatttcatagtggtcctggaa
ggtatggccacaaaagtctgagagttacgcttaatcccacatccactcaa
agtaatataaaattgaacctagttctcagtgaatctactcaagaaaaggc
tttgtcacattactttcttttacatttttttcctagaatgatattcaggc
taagtcatctttattcttaatcttcagcaccagagtgcttcagatatctg
acttgtttttcaaattttggaataataaggtattggagtagcagggccaa
cccaaaatgtgaaattggttaagtttaatatacaccgtatataaacaaag
cttttcataattctttgaatgaaacgactttgagtacgttaaaccaccag
aaagcaaagattctctctctctctctctctctctctctctctctct
gaattcactatgtagagcagggtggtctcaaattcacagcaggcttcctg
ctactttgttccaagtgctgggactaaagtcctgcattaccatgttagtt
ttattgaaacagtctttaagaataaaactacatggccagtgtactaatgt
tttataagtcaaataatataaccaatataatattaaaatttaactctgat
cagattatgatgacttagatatttttttaattttactccatgaaataagt
catgcaaaaatttaaaatagtagaggtgatgagaaagaatgtacaaagtt
atctactactgacttatatattttgttctgttcttagatctttttctctt
gattgttaggattataatagtagaatgctctttagatgagtaattactga
gaatcacatttactttttttttttttttcaaggcagggtttctctatgta
tccctggctgtcttggaactcactttgtagaccaggctggcctcaaactc
agaaatctgcctgcctctgcctcccgagtgctgggattaaaggcgtgtgc
caccacgcctggccgatttctttttaaaaaaattggattactatttataa
aatatcaacacatttaggaaggaacttcagggaagaatttttactcaaaa
tcttgtagctgaatatgtttttttttttacattgaatatagataaaccat
atctttggtaataagtaacaatacagttctaacatttttcacatcatgaa
tcaaagaacattgtcatgttgcaccatacaggtatgttagctgcttaaaa
caatgccagttgttttgggaagtatgccccattgtacactattctctcaa
tatcaatgatctcaattccccaataacagacacaagctaacaggatggat
tatggaaaacaggattcattattttctgtaaacaaggaaacaccaccttc
aacatcaaagaatacaattgccttaatgtaagggtttgaaaatgaatttt
ccaagcaaaagacccagtaggcaagctgggatagccattcctatatctaa
cgaaataaaactcaaccaaaataaatcaaaactgaggaaagaactttcat
gctcttcaaggaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123580700_123581444
seq2: B6Ng01-152G06.b_43_788 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTTTGCTTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTTTGCTTTCTGG  50

seq1  TGGTTTAACGTACTCAAAGTCGTTTCATTCAAAGAATTATG-AAAGCTTT  99
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGTTTAACGTACTCAAAGTCGTTTCATTCAAAGAATTATGAAAAGCTTT  100

seq1  GTTTATATACGGTGTATATTAAACTTAACCAATTTCACATTTTGGGTTGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATACGGTGTATATTAAACTTAACCAATTTCACATTTTGGGTTGG  150

seq1  CCCTGCTACTCCAATACCTTATTATTCCAAAATTTGAAAAACAAGTCAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTACTCCAATACCTTATTATTCCAAAATTTGAAAAACAAGTCAGA  200

seq1  TATCTGAAGCACTCTGGTGCTGAAGATTAAGAATAAAGATGACTTAGCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAGCACTCTGGTGCTGAAGATTAAGAATAAAGATGACTTAGCCT  250

seq1  GAATATCATTCTAGGAAAAAAATGTAAAAGAAAGTAATGTGACAAAGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCATTCTAGGAAAAAAATGTAAAAGAAAGTAATGTGACAAAGCCT  300

seq1  TTTCTTGAGTAGATTCACTGAGAACTAGGTTCAATTTTATATTACTTTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAGTAGATTCACTGAGAACTAGGTTCAATTTTATATTACTTTGA  350

seq1  GTGGATGTGGGATTAAGCGTAACTCTCAGACTTTTGTGGCCATACCTTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGTGGGATTAAGCGTAACTCTCAGACTTTTGTGGCCATACCTTCC  400

seq1  AGGACCACTATGAAATATTCACCAAACCAGAGCCAGGCTTAGAATCAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACTATGAAATATTCACCAAACCAGAGCCAGGCTTAGAATCAACA  450

seq1  AAGGCGCTCCTGCTAATTGAGTTGGAGTTTCTGTCCTGACAACTGGAACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGCTCCTGCTAATTGAGTTGGAGTTTCTGTCCTGACAACTGGAACT  500

seq1  TACTTCATTTCATTTTTGCAAAGCCTTCCCTCTTGTGAGAGCTATTTATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATTTCATTTTTGCAAAGCCTTCCCTCTTGTGAGAGCTATTTATA  550

seq1  TTCCAGTCCTTACACAACTGCACTTATGCCATTATCTTTCCAATTTACCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTCCTTACACAACTGCACTTATGCCATTATCTTTCCAATTTACCT  600

seq1  GTCAAACATACCAAACAAACTCTTAACCCCACAGTCCATTCAAATTAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACATACCAAACAAACTCTTAACCCCACAGTCCATTCAAATTAGTT  650

seq1  TTCTGCTCCTTCGTTTCCCACCCCCCAGCCCCCGTCCCACTTCAAGTTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCCTTCGTTTCCCACCCCCCAGCCCCCGTCCCACTTCAAGTTTA  700

seq1  TTATATGCAGGGGAGCAGGAGTGATTCATAAAACTGCACTGAATTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCAGGGGAGCAGGAGTGATTCATAAAACTGCACTGAATTC  746

seq1: chr10_123472359_123473474
seq2: B6Ng01-152G06.g_69_1183

seq1  GAATTCACTATGTAGAGCAGGGTGGTCTCAAATTCACAGCAGGCTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGAGCAGGGTGGTCTCAAATTCACAGCAGGCTTCCTG  50

seq1  CTACTTTGTTCCAAGTGCTGGGACTAAAGTCCTGCATTACCATGTTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGTTCCAAGTGCTGGGACTAAAGTCCTGCATTACCATGTTAGTT  100

seq1  TTATTGAAACAGTCTTTAAGAATAAAACTACATGGCCAGTGTACTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAACAGTCTTTAAGAATAAAACTACATGGCCAGTGTACTAATGT  150

seq1  TTTATAAGTCAAATAATATAACCAATATAATATTAAAATTTAACTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGTCAAATAATATAACCAATATAATATTAAAATTTAACTCTGAT  200

seq1  CAGATTATGATGACTTAGATATTTTTTTAATTTTACTCCATGAAATAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATGATGACTTAGATATTTTTTTAATTTTACTCCATGAAATAAGT  250

seq1  CATGCAAAAATTTAAAATAGTAGAGGTGATGAGAAAGAATGTACAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAAAATTTAAAATAGTAGAGGTGATGAGAAAGAATGTACAAAGTT  300

seq1  ATCTACTACTGACTTATATATTTTGTTCTGTTCTTAGATCTTTTTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTACTGACTTATATATTTTGTTCTGTTCTTAGATCTTTTTCTCTT  350

seq1  GATTGTTAGGATTATAATAGTAGAATGCTCTTTAGATGAGTAATTACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTAGGATTATAATAGTAGAATGCTCTTTAGATGAGTAATTACTGA  400

seq1  GAATCACATTTACTTTTTTTTTTTTTTTCAAGGCAGGGTTTCTCTATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACATTTACTTTTTTTTTTTTTTTCAAGGCAGGGTTTCTCTATGTA  450

seq1  TCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTC  500

seq1  AGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGC  550

seq1  CACCACGCCTGGCCGATTTCTTTTTAAAAAAAATTGGATTACTATTTATA  600
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CACCACGCCTGGCCGATTTCTTTTT-AAAAAAATTGGATTACTATTTATA  599

seq1  AAATATCAACACATTTAGGAAGGAACTTCAGGGAAGAATTTTTACTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAACACATTTAGGAAGGAACTTCAGGGAAGAATTTTTACTCAAA  649

seq1  ATCTTGTAGCTGAATATGTTTTTTATTTTACATTGAATATAGATAAACCA  700
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCTTGTAGCTGAATATGTTTTTTTTTTTACATTGAATATAGATAAACCA  699

seq1  TATCTTTGGTAATAAGTAACAATACAGTTCTAACA-TTTTCACATCATGA  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCTTTGGTAATAAGTAACAATACAGTTCTAACATTTTTCACATCATGA  749

seq1  ATCAAAGAACATTGTCATGTTGCACCATACAGGTATGTTTAGCTGCTTAA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCAAAGAACATTGTCATGTTGCACCATACAGGTATG-TTAGCTGCTTAA  798

seq1  AACAATGCCAGTTGTTTT-GGAAGTATGCCCCATTGTACACTATTCTCTC  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACAATGCCAGTTGTTTTGGGAAGTATGCCCCATTGTACACTATTCTCTC  848

seq1  AATATCAATGATCTCAATTCCCCAATAACAGACACAAGCTAACAGAATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATATCAATGATCTCAATTCCCCAATAACAGACACAAGCTAACAGGATGG  898

seq1  A-TAT-GAAAACAGGATCCATTATTTTTCTGTATACAA-GAAACA-CACC  944
      | ||| ||||||||||| ||||| ||||||||| |||| |||||| ||||
seq2  ATTATGGAAAACAGGATTCATTA-TTTTCTGTAAACAAGGAAACACCACC  947

seq1  -TCAACATCAAAGATAACAATTGCCTTAATGTAAAGGGTTTGAAAATG-A  992
       |||||||||||||  |||||||||||||||| ||||||||||||||| |
seq2  TTCAACATCAAAGAATACAATTGCCTTAATGT-AAGGGTTTGAAAATGAA  996

seq1  TTTTCCAAGCAAAAAGACCCAGTAGGCAAGCTGGTATAGCCATTCTCATA  1042
      |||||||||| ||||||||||||||||||||||| ||||||||||  |||
seq2  TTTTCCAAGC-AAAAGACCCAGTAGGCAAGCTGGGATAGCCATTCCTATA  1045

seq1  TCTAACAAAATAGAACTCCAACCAAAATTAATCAAAAACTTGAGGAAGGA  1092
      |||||| ||||| |||| |||||||||| ||||||||   ||||||| ||
seq2  TCTAACGAAATAAAACT-CAACCAAAATAAATCAAAA--CTGAGGAAAGA  1092

seq1  CACTTCATGCTCATCTAAGGAAAA  1116
         ||||||||| || ||||||||
seq2  ACTTTCATGCTCTTC-AAGGAAAA  1115