BAC Information

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BAC

Clone NameB6Ng01-152I23
Chromosome10 (Build37)
Map Location 85,161,697 - 85,296,078
singlet/doubletdoublet
Overlap geneEG626858, LOC626878, LOC669723, LOC626940
Upstream genePolr3b, Rfx4, EG625690, Ric8b, Fhl4, AI597468, Mterfd3, Cry1, EG666974, Btbd11
Downstream genePwp1, Prdm4, Ascl4, D10Wsu52e, Bpil2, Fbxo7, Syn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152I23.bB6Ng01-152I23.g
ACCDH948105DH948106
length9811,073
definitionDH948105|Mus musculus domesticus DNA, BAC clone: B6Ng01-152I23, 5' end.DH948106|Mus musculus domesticus DNA, BAC clone: B6Ng01-152I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,161,697 - 85,162,680)(85,295,007 - 85,296,078)
sequence
gaattcttcagagagactgggaaatcttacaggacaccttagcattctgt
gaatcgagagagcatggctggtatgtgggaaaaatgtgcaggaaaccgta
gcccagtggctccctatgttaaactcaaaagtgcttaggatttccaggca
gcagaaagaatgagacaggcaatcaatggctccatgtgggaccagaagaa
aaggctaccttctgattgaacatgctcatctctcagcatgagcagtacta
aacccagctcatatctgtggaagaaggagaccacctcccctctaaaattt
aaaaagacaaaacactctgttttgacagtatgggccacaccactttagaa
gattcccaatatcattgtttaatgtccccagaagatatggtgctcacaaa
ggccagcataaagtaatggtttccctctatgtgggtctgaacagctacac
ctctctgaggatgctcaagagaggatctttcacttctacattccctccaa
ctgtcagctcatcatctacaccttagaaaattgacatatggattatgtcc
tctgagtgttttggaggtgagatcaggaccaggtcagaaatgaatggggt
gtgatttgtttgccatttgctatgggtgtaattggaacttggctcattta
aaaatgccaaggacatgagggaggagctgtaaagacttacaaggtgaagg
gatttcctggtatcatttcctaggtctactttacaaggaatgcatatgaa
aggaaaaagatgtccacatggctcacagaaaagcctgctgcaacagacct
agctgtgtagtgaagtgggctcattctaaagctgtcaggacactggatat
gggcaacatctgcccatttttcacaataccaaagcctgctgacaagtcta
aatgtgcggaaggcaggtttatatagaaatcccaagacactggggatgac
taccatcctccccttgttatcaaaggagagg
gaattcttggcacagctgttatttttaagtttctactgctgtgaaacatg
aggtttgtggcgtctctctttcagtcccaaaagctccatttagagttctc
caggctttggtggaatttcaggtattgtctacaaaaaaaaaaaacaaaaa
aaaaaacaaaaaaaaaacaaaaaacccaaaaccaaaacaaaaacacacac
acacacaaaacaaaaaacaaacaaacaaaaaaaccaaaccaaaccaaacc
aaaaacaaaagccaaaaaaaccataccaccacattctcagacaacagttc
aatgtgatctaaaaagctttagaaaaaacaaaagcctcatgcatgctact
cagtaccaggccatttttatgaggactcctggctgatctgaatttcttgc
tgtctggatagatcatcctggcaagtctcaagtcctacaggatgcacagg
gataaatccaactgactcacaactgtaatttcaaatgagaattcaacatt
tgaaaatccattcccacaatatttactcactctctgccatgcaccaggcc
taggaaataactattggtagttaatgtacccaaaagactggaagcgccca
tcatgtgacgtgcataaagtcatacatgagcaacacacaattctaccttt
cagaaaggcagagtgaaatgggtgcagaatgtatatgactgagtttgatt
cccagcaccacaaagggtacaaaacaatggttttcagtacagtagaattg
gaactgtgagtctatcgcaataaaattgtagaatctttttactgcttcaa
aagaaactcctctgaatttatgaaattcctaggcaaatggatggacctgg
agggcatcatcctgagtgaggtcacccaatcacaaaagaactcacacaat
atttactcactgataagtggatttagcccagaaacttaggatacccaaga
atataagatacaattgctaaaccacatgaaactcaagaaaacgaagacca
aatgtgtggacacttttgctccttctagaatggggacaaaaaaccctatg
gaagggagtacgagaacaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_85161697_85162680
seq2: B6Ng01-152I23.b_47_1027

seq1  GAATTCTTCAGAGAGACTGGGAAATCTTACAGGACACCTTAGCATTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGAGACTGGGAAATCTTACAGGACACCTTAGCATTCTGT  50

seq1  GAATCGAGAGAGCATGGCTGGTATGTGGGAAAAATGTGCAGGAAACCGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGAGAGAGCATGGCTGGTATGTGGGAAAAATGTGCAGGAAACCGTA  100

seq1  GCCCAGTGGCTCCCTATGTTAAACTCAAAAGTGCTTAGGATTTCCAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTGGCTCCCTATGTTAAACTCAAAAGTGCTTAGGATTTCCAGGCA  150

seq1  GCAGAAAGAATGAGACAGGCAATCAATGGCTCCATGTGGGACCAGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGAATGAGACAGGCAATCAATGGCTCCATGTGGGACCAGAAGAA  200

seq1  AAGGCTACCTTCTGATTGAACATGCTCATCTCTCAGCATGAGCAGTACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACCTTCTGATTGAACATGCTCATCTCTCAGCATGAGCAGTACTA  250

seq1  AACCCAGCTCATATCTGTGGAAGAAGGAGACCACCTCCCCTCTAAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGCTCATATCTGTGGAAGAAGGAGACCACCTCCCCTCTAAAATTT  300

seq1  AAAAAGACAAAACACTCTGTTTTGACAGTATGGGCCACACCACTTTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAAAACACTCTGTTTTGACAGTATGGGCCACACCACTTTAGAA  350

seq1  GATTCCCAATATCATTGTTTAATGTCCCCAGAAGATATGGTGCTCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCAATATCATTGTTTAATGTCCCCAGAAGATATGGTGCTCACAAA  400

seq1  GGCCAGCATAAAGTAATGGTTTCCCTCTATGTGGGTCTGAACAGCTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCATAAAGTAATGGTTTCCCTCTATGTGGGTCTGAACAGCTACAC  450

seq1  CTCTCTGAGGATGCTCAAGAGAGGATCTTTCACTTCTACATTCCCTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGGATGCTCAAGAGAGGATCTTTCACTTCTACATTCCCTCCAA  500

seq1  CTGTCAGCTCATCATCTACACCTTAGAAAATTGACATATGGATTATGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCTCATCATCTACACCTTAGAAAATTGACATATGGATTATGTCC  550

seq1  TCTGAGTGTTTTGGAGGTGAGATCAGGACCAGGTCAGAAATGAATGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGTTTTGGAGGTGAGATCAGGACCAGGTCAGAAATGAATGGGGT  600

seq1  GTGATTTGTTTGCCATTTGCTATGGGTGTAATTGGAACTTGGCTCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGTTTGCCATTTGCTATGGGTGTAATTGGAACTTGGCTCATTTA  650

seq1  AAAATGCCAAGGACATGAGGGAGGAGCTGTAAAGACTTACAAGGTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCAAGGACATGAGGGAGGAGCTGTAAAGACTTACAAGGTGAAGG  700

seq1  GATTTCCTGGTATCATTTCCTAGGTCTACTTTACAAGGAATGCATATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTGGTATCATTTCCTAGGTCTACTTTACAAGGAATGCATATGAA  750

seq1  AGGAAAAAGATGTCCACATGGCTCACAGAAAAGCCTGCTGCAACAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGATGTCCACATGGCTCACAGAAAAGCCTGCTGCAACAGACCT  800

seq1  AGCTGTGTAGTGAAGTGGGCTCATTCTAAAGCTGTCAGGACACTGGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTAGTGAAGTGGGCTCATTCTAAAGCTGTCAGGACACTGGATAT  850

seq1  GGCCAACATCTGCCCATTTTCCACAATACCAAAGCCTGCTGACAGGTCTA  900
      || ||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  GGGCAACATCTGCCCATTTTTCACAATACCAAAGCCTGCTGACAAGTCTA  900

seq1  AATGTGCAGTAAGGCAGGTTTAGTATAGAACTCCTAGGACACTGGGCATG  950
      ||||||| | |||||||||||| ||||||| ||| | ||||||||| |||
seq2  AATGTGC-GGAAGGCAGGTTTA-TATAGAAATCCCAAGACACTGGGGATG  948

seq1  ACTACCAT-CTTCCCATGTTACACAAAGGGAGAGG  984
      |||||||| || ||| |||||  |||| |||||||
seq2  ACTACCATCCTCCCCTTGTTA-TCAAA-GGAGAGG  981

seq1: chr10_85295007_85296078
seq2: B6Ng01-152I23.g_72_1144 (reverse)

seq1  AATTTTGTCTCT-GTAACTCCTTCCAT-GGGTGTTTTGTTCCCATTTCTA  48
      |||||||| ||| |||   |||||||| |||| |||||| |||| |||| 
seq2  AATTTTGT-TCTCGTACTCCCTTCCATAGGGTTTTTTGTCCCCA-TTCT-  47

seq1  AGAAGGGGC-AAAGTGTCCACAC-TTTGGTCTTCGTTTTTCTTGAGTTTC  96
      |||||| || ||||||||||||| ||||||||||| ||||||||||||||
seq2  AGAAGGAGCAAAAGTGTCCACACATTTGGTCTTCG-TTTTCTTGAGTTTC  96

seq1  ATGT-GTTTAGCAAATTGTATCTTATA-TCTTGGGTATCCTAAGTTTCTG  144
      |||| ||||||| |||||||||||||| ||||||||||||||||||||||
seq2  ATGTGGTTTAGC-AATTGTATCTTATATTCTTGGGTATCCTAAGTTTCTG  145

seq1  GGCTAATATCCACTTATCAGTGAGTAAATATTGTGTGAGTTCTTTTGTGA  194
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAA-ATCCACTTATCAGTGAGTAAATATTGTGTGAGTTCTTTTGTGA  194

seq1  TTGGGTGACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTA  244

seq1  GGAATTTCATAAATTCAGAGGAGTTTCTTTTGAAGCAGTAAAAAGATTCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCATAAATTCAGAGGAGTTTCTTTTGAAGCAGTAAAAAGATTCT  294

seq1  ACAATTTTATTGCGATAGACTCACAGTTCCAATTCTACTGTACTGAAAAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTATTGCGATAGACTCACAGTTCCAATTCTACTGTACTGAAAAC  344

seq1  CATTGTTTTGTA-CCTTTGTGGTGCTGGGAATCAAACTCAGTCATATACA  393
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTTGTACCCTTTGTGGTGCTGGGAATCAAACTCAGTCATATACA  394

seq1  TTCTGCACCCATTTCACTCTGCCTTTCTGAAAGGTAGAATTGTGTGTTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACCCATTTCACTCTGCCTTTCTGAAAGGTAGAATTGTGTGTTGC  444

seq1  TCATGTATGACTTTATGCACGTCACATGATGGGCGCTTCCAGTCTTTTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATGACTTTATGCACGTCACATGATGGGCGCTTCCAGTCTTTTGG  494

seq1  GTACATTAACTACCAATAGTTATTTCCTAGGCCTGGTGCATGGCAGAGAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTAACTACCAATAGTTATTTCCTAGGCCTGGTGCATGGCAGAGAG  544

seq1  TGAGTAAATATTGTGGGAATGGATTTTCAAATGTTGAATTCTCATTTGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAATATTGTGGGAATGGATTTTCAAATGTTGAATTCTCATTTGAA  594

seq1  ATTACAGTTGTGAGTCAGTTGGATTTATCCCTGTGCATCCTGTAGGACTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTTGTGAGTCAGTTGGATTTATCCCTGTGCATCCTGTAGGACTT  644

seq1  GAGACTTGCCAGGATGATCTATCCAGACAGCAAGAAATTCAGATCAGCCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGCCAGGATGATCTATCCAGACAGCAAGAAATTCAGATCAGCCA  694

seq1  GGAGTCCTCATAAAAATGGCCTGGTACTGAGTAGCATGCATGAGGCTTTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTCATAAAAATGGCCTGGTACTGAGTAGCATGCATGAGGCTTTT  744

seq1  GTTTTTTCTAAAGCTTTTTAGATCACATTGAACTGTTGTCTGAGAATGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTAAAGCTTTTTAGATCACATTGAACTGTTGTCTGAGAATGTG  794

seq1  GTGGTATGGTTTTTTTGGCTTTTGTTTTTGGTTTGGTTTGGTTTGGTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATGGTTTTTTTGGCTTTTGTTTTTGGTTTGGTTTGGTTTGGTTTT  844

seq1  TTTGTTTGTTTGTTTTTTGTTTTGTGTGTGTGTGTGTTTTTGTTTTGGTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTTTTGTTTTGTGTGTGTGTGTGTTTTTGTTTTGGTT  894

seq1  TTGGGTTTTTTGTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTGTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTTTTGTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTGTA  944

seq1  GACAATACCTGAAATTCCACCAAAGCCTGGAGAACTCTAAATGGAGCTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATACCTGAAATTCCACCAAAGCCTGGAGAACTCTAAATGGAGCTTT  994

seq1  TGGGACTGAAAGAGAGACGCCACAAACCTCATGTTTCACAGCAGTAGAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTGAAAGAGAGACGCCACAAACCTCATGTTTCACAGCAGTAGAAA  1044

seq1  CTTAAAAATAACAGCTGTGCCAAGAATTC  1072
      |||||||||||||||||||||||||||||
seq2  CTTAAAAATAACAGCTGTGCCAAGAATTC  1073