BAC Information

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BAC

Clone NameB6Ng01-152M04
Chromosome1 (Build37)10 (Build37)
Map Location 145,962,435 - 145,963,406104,054,931 - 104,055,352
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2
Downstream geneRgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21, Rgs18, LOC667877
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152M04.bB6Ng01-152M04.g
ACCDH948255DH948256
length965728
definitionDH948255|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M04, 5' end.DH948256|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(145,962,435 - 145,963,406)(104,054,931 - 104,055,352)
sequence
gaattccctccatgaaaccacagcatgattgcaaagactgcttagcttga
gagctctgcatctgaattcctgtctgtgacttgccaccatgtgacactgg
aatatcaaagtgctgtaggctgcaccccttctaaccacaaagggaatata
aaaatggaatacaagcctccctaagtatgacataaagtataacatattga
gtataacgattgacaaatatttgtcattctgcatggaatacaacgatagt
tctcatttttgaatgttcatcccctgaaaaactagattttaaatacaacc
tcctaacacccaggaacctttcttatggaacattgggaagacacaaaaac
aataaagttaccactaaacaaaagacctagaaggaggagtaggagaaaaa
aaatccacaatgtcttttatcttagccctactagcttgtgttttacctat
tcgattgtgagaagggtgtagacttttatccagctcctaattttttactt
aaggtaatattatgttatctacttggataatacattcacatatgttctaa
tagcatttacatatccatatgtattcactcaacttgtgataatttatcct
taaattctcaaagtcttgattgccttatgaaatactgaaagaggaaaaac
attagcatggtttcacataaagagctgcactacattcctttgctcaaagg
aaaaatcaaggagcatagaataatgcagagccttatgcttgccgtcagat
acacctgcatttgggattttcattacctcagataagattagatagtgtac
ttattttcactgagatttcatttatttttgtctatgaactgaatagaacg
ttccctcgtttgtgtacacttttaaataattgatcgtcagtaaagaaaac
cagactcttccatcagattcaggacagtctcataccctgtatgttgttac
ttgccagctgtatca
gaattcctaatcctgataaatgatttcttcaaagtcgctggatagaggaa
aactctaacaaatcattggcctttctctttgaagggataaacaagttgag
aaagaaatcccggaaacaacacccttcgcaatagtcacaaataatataaa
atatcttggtgtgactctaactaagggagtaaaagatctgtatgataaga
acttcaaatctctgaagaaagaaattgaagaagatctcataaaatggaaa
gatctcccatgctcatggattagcaggattaatatagtaaaactgcccat
cttgctgaaagcaatctacagattcaatgcaatccccatcaaaattccaa
ctcaattcttcaatgaattagaaagggcaatttacaaattcatctggaat
aacaaacaacctaggatagcaaaactattctcaacaataaaagaacctct
ggtgaaatcaccatgcctgacctcaagctgtactacagagaaattgtgat
aaacactgcatggtactggtacagcaacaaacaggtacatctgatatact
ttgtgggttacacctcccacacgttacagtggtgtttctcaatgaatcat
tcatgggattaattttggcatttctggaatcatgattttaatcatttggt
ttatataaaagtttttatgaagaggctacggtgagctgatgatgtctttc
atcttgaaaatgttctcctatattgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_145962435_145963406
seq2: B6Ng01-152M04.b_41_1005

seq1  GAATTCCCTCCAATGAAACCACAGCATGATTGCAAAGACTGCTTAGCTTG  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCC-ATGAAACCACAGCATGATTGCAAAGACTGCTTAGCTTG  49

seq1  AGAGCTCTGCATCTGAATTCCTGTCTGTGACTTGCCACCATGTGACACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTGCATCTGAATTCCTGTCTGTGACTTGCCACCATGTGACACTG  99

seq1  GAATATCAAAGTGCTGTAGGCTGCAATCTTTCTAACCACAAAGGGAATAT  150
      |||||||||||||||||||||||||  | |||||||||||||||||||||
seq2  GAATATCAAAGTGCTGTAGGCTGCACCCCTTCTAACCACAAAGGGAATAT  149

seq1  AAAAATGCAATACAAGCCTCCATAAGTATGACATAAAGTATAACATATTG  200
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAAATGGAATACAAGCCTCCCTAAGTATGACATAAAGTATAACATATTG  199

seq1  AGTATAACGATTGACAAATATTTGTCAGTCTGCATGGAATACAACGATAG  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTATAACGATTGACAAATATTTGTCATTCTGCATGGAATACAACGATAG  249

seq1  TTCTCATTTTTGAATGTTCAGCACATGAAAAACTAGATTTAAAATACAAG  300
      |||||||||||||||||||| | | ||||||||||||||| |||||||| 
seq2  TTCTCATTTTTGAATGTTCATCCCCTGAAAAACTAGATTTTAAATACAAC  299

seq1  CTCCTAACACCCAGGAACCTTTCTTATGGTAGATTGGGAAGACACAAAAA  350
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  CTCCTAACACCCAGGAACCTTTCTTATGGAACATTGGGAAGACACAAAAA  349

seq1  CAATAAAGTTACCACTAAACAAAAGACCTAGAAGGAGGAGTAGGAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTTACCACTAAACAAAAGACCTAGAAGGAGGAGTAGGAGAAAA  399

seq1  AAAATACAGAATGTCTTTTATCTTAGCCATACTAGCTTGTGTTTTACCTA  450
      ||||| || ||||||||||||||||||| |||||||||||||||||||||
seq2  AAAATCCACAATGTCTTTTATCTTAGCCCTACTAGCTTGTGTTTTACCTA  449

seq1  TTCGATTGTGAGAAGGGTGTAGACTTTTATCCAGCTCCTAATTTTTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTGTGAGAAGGGTGTAGACTTTTATCCAGCTCCTAATTTTTTACT  499

seq1  TAGGGTAATATTATGTTATCTACTTGGATAATACATTCACATATGTTCTA  550
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAATATTATGTTATCTACTTGGATAATACATTCACATATGTTCTA  549

seq1  ATAGCATTTACATATCCATATGTATTTACTCAACTTGTGATAATTTATCC  600
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAGCATTTACATATCCATATGTATTCACTCAACTTGTGATAATTTATCC  599

seq1  TTAAATTCTCAAAGTCTTGATTGCCTTATGAAATACTGAAAGAGGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTCAAAGTCTTGATTGCCTTATGAAATACTGAAAGAGGAAAAA  649

seq1  CATTAGCATGGTTTCACATAAAGAGCTGCACTACATTCCTTTGCTCAACA  700
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATTAGCATGGTTTCACATAAAGAGCTGCACTACATTCCTTTGCTCAA-A  698

seq1  AGAAAAATCAGGGAGCATAGAATATTGCAGAGCCTTAGGCTTGCGGTCAG  750
       ||||||||| ||||||||||||| |||||||||||| |||||| |||||
seq2  GGAAAAATCAAGGAGCATAGAATAATGCAGAGCCTTATGCTTGCCGTCAG  748

seq1  ATACACCTGCATTTGGGATTTTCATTACCTCAG-TAAGATTAGATAGTGT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATACACCTGCATTTGGGATTTTCATTACCTCAGATAAGATTAGATAGTGT  798

seq1  TCTTATTTTCACTGAGATTTCATTTTTTTTCATCTATGAACTGAATAGAA  849
       |||||||||||||||||||||||| ||||  ||||||||||||||||||
seq2  ACTTATTTTCACTGAGATTTCATTTATTTTTGTCTATGAACTGAATAGAA  848

seq1  CGTTCCCTCCTTTGTGTACACATTTTAAAGAATTGATCGTCTGTAGGGAA  899
      ||||||||| ||||||||||| ||||||| ||||||||||| |||  |||
seq2  CGTTCCCTCGTTTGTGTACAC-TTTTAAATAATTGATCGTCAGTAAAGAA  897

seq1  AACTAGACTCTTCCATCTGGATTCGGGTAGAGTCTCTTAGCCTGTAATGG  949
      ||| |||||||||||||  ||||| || | |||||| || ||||||   |
seq2  AACCAGACTCTTCCATC-AGATTCAGG-ACAGTCTCATACCCTGTA--TG  943

seq1  TTGTTACATGCACAGCTGTATCA  972
      ||||||| ||| |||||||||||
seq2  TTGTTACTTGC-CAGCTGTATCA  965

seq1: chr10_104054931_104055352
seq2: B6Ng01-152M04.g_162_582 (reverse)

seq1  AGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCC  50
      ||||||||||||| |||||||||||| ||||||||||||| || ||||| 
seq2  AGTACCATGCAGTGTTTATCACAATTTCTCTGTAGTACAGCTTGAGGTCA  50

seq1  GGGATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGC  100
      || ||||||||| ||||||||||||||||||  ||||||| || ||||||
seq2  GGCATGGTGATTTCACCAGAGGTTCTTTTATTGTTGAGAATAG-TTTTGC  99

seq1  TATCCTAGGTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTTATA  150
      ||||||||||| ||||||||||||||||||| ||   |||||||||| ||
seq2  TATCCTAGGTTGTTTGTTATTCCAGATGAATTTGTAAATTGCCCTTTCTA  149

seq1  ATTCTTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTG  199

seq1  TAGATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGCCGAT  250
      |||||||||||  ||||||| | || |||||||||||| |||||||  ||
seq2  TAGATTGCTTTCAGCAAGATGGGCAGTTTTACTATATTAATCCTGCTAAT  249

seq1  CCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTT  300
      ||||||||||||||||||||||||| || |||||||||||| ||||||||
seq2  CCATGAGCATGGGAGATCTTTCCATTTTATGAGATCTTCTTCAATTTCTT  299

seq1  TCTTCAGAGACATGAAGTTCTTGTCATACAGATCTTTCACTTCCTTAGTT  350
      ||||||||||  |||||||||| |||||||||||||| ||| ||||||||
seq2  TCTTCAGAGATTTGAAGTTCTTATCATACAGATCTTTTACTCCCTTAGTT  349

seq1  AGAGTCACGCCAAGGAATTTTATATTATTTGTGGCTATTGAGAAGGGTGT  400
      |||||||| |||||  ||||||||||||||||| |||||| |||||||||
seq2  AGAGTCACACCAAGATATTTTATATTATTTGTGACTATTGCGAAGGGTGT  399

seq1  TGTTTCCCTAATTTCTTTCTCA  422
      |||||||   ||||||||||||
seq2  TGTTTCCGGGATTTCTTTCTCA  421