BAC Information

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BAC

Clone NameB6Ng01-153F20
Chromosome10 (Build37)
Map Location 21,163,499 - 21,282,259
singlet/doubletdoublet
Overlap geneLOC100039906
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1
Downstream gene1700020N01Rik, EG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153F20.bB6Ng01-153F20.g
ACCDH948698DH948699
length1,110736
definitionDH948698|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F20, 5' end.DH948699|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,281,125 - 21,282,259)(21,163,499 - 21,164,230)
sequence
gaattccacacagttgcagaatctatcactgacaaaaatcacacccctat
tagagcatgaggcaaatcatagtcaatttgccttgtgcttatctgaagca
atcagatctgaagcaggccctatcccacacatgggattaaaatgaaacta
tattgccatatttctttgatttaaaaagcaaaacaaaaataaaccaagca
actaaccaaccaaacaactccaaacttaggtaagttacccgcagaaaggt
tatttagaattagatgatttaattaatgcatgatgagtgccctgcttaga
gacagtagtcaggaatcgaacgcattcagctctgctcttcagaaagtctc
atcattggtaaacaggaagatcaaatcacgtgtcttcttcactttcactc
ttttgtgttcagagtggtcctgaattcccacaagttaatggaatgagaac
aatgttaccaattacctttagtttgtaatcaatgtcctgtctagctctgt
attctgtgggggctctaaaggatgctgtgagcttattctcaagtgtaact
ccagtctgtgacctatgggaagcctgtgccaggcgtctgaggtctgaatc
aacaatttgtcattaccacctgccctactatgttcccaagaggagcactg
ccaggataatgaatccttcaaggcagttgaacaaatggctgtttctggtt
ctctacatacttccctagtgtttgtcttggtaaatgagagaggttctctg
cacccttggattttcatttcctgtgctctcttctcctgataaattgagag
ggttttcctgaaatgagatatgacagcctccatggagacgaagcaggggt
ccagaaactcagacatagttttctttgcattgagtgacagttccatgcca
cagggtgatgttgaagtatggttactgctctgagcagagatggctctgtt
ggactcctgccctctgtctgcagcaaaactcctgcaggcaatgtgactag
aaaatcaacaatcagatccacaggtctagaatatcctgagagtggaggga
tgagcagcaagcatctagcatttcttggctgtcttctttctcattcattc
aaattcctct
gaattcatgtcctagcaggggacataattagccagtaatgagaggctgtc
ctgaggggcgtcctgaaacctctgtggaagtgttgtgggacagacggcct
gttgtaatccgtgggatggaaatgagcttcagtgcttaaaatgtttcata
actccaaatcaggctgagcctcctcctgtcagcccactgagaggctgtgc
ctgtgaggggaagcggctgatgctgtggtcttctgggggaggggtggtgg
agcctgctttgtgccttgtaaaatataaaggctttctggttccattccat
cttcttaaaaggaaaagctacatgttatattattccgtttgtatgaaagg
ttgcaaataaatgagtctctggagacatggaagcctaagctggtgggtgt
gtgcacagggaggagaggggtaaggcttcttgaatgtttgggaaggtaaa
aatggcagcttttgcttcctgtacgccagcctctgctggtgtgcccaccc
atgcagcccttgctccctctcctgaagtgagtgctagcacactcttccag
cttacagacaagggacccgaggctcagaggaggatccaggactagttcct
tcatggtcacacagctgggatccctgcctcaccatcttgcttttagcatt
gatacatagactgcagggcttggctctttctgcattcatctatggtcatt
acagttttggccaccccaaaacacagtggtgagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21281125_21282259
seq2: B6Ng01-153F20.b_47_1156 (reverse)

seq1  AGAGGAATTTGAATAGGATATGAAGGAAAGGAAGGAACAGGCACAAGAAA  50
      ||||||||||||||  || ||||  |||| ||||  ||||   |||||||
seq2  AGAGGAATTTGAAT--GA-ATGA--GAAA-GAAG--ACAG--CCAAGAAA  40

seq1  TGCTTAGATGCTTGCTGCTCCATCTCCCTCCCACTCTCAGGATATTTCTG  100
      ||| ||||||||||||||||    ||||| |||||||||||||| |||| 
seq2  TGC-TAGATGCTTGCTGCTC---ATCCCT-CCACTCTCAGGATA-TTCT-  83

seq1  GGACCTGTGGATCTTGGATTGTTGATTTTCCTAGTCCACATTGCCTGCAA  150
       |||||||||||||  ||||||||||||| ||||| |||||||||||| |
seq2  AGACCTGTGGATCT--GATTGTTGATTTT-CTAGT-CACATTGCCTGC-A  128

seq1  GGAGTTTCTGCTGGCAGACAGAGGGCAGGAGTCCAACAGAGCCATCTCTG  200
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  GGAGTTT-TGCT-GCAGACAGAGGGCAGGAGTCCAACAGAGCCATCTCTG  176

seq1  CTCAGAGCAGTAACCATACTTCAACATCACCCTGTGGCATGGAACTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGCAGTAACCATACTTCAACATCACCCTGTGGCATGGAACTGTCA  226

seq1  CTCAATGCAAAGAAAACTATGTCTTGGGTTTCTGGACCCCTGCTTCGTCT  300
      ||||||||||||||||||||||| || |||||||||||||||||||||||
seq2  CTCAATGCAAAGAAAACTATGTC-TGAGTTTCTGGACCCCTGCTTCGTCT  275

seq1  CCATGGAGGCTGTCATATCTCATTTCAGGAAAACCCTCTCAATTTATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGGCTGTCATATCTCATTTCAGGAAAACCCTCTCAATTTATCAG  325

seq1  GAGAAGAGAGCACAGGAAATGAAAATCCAAGGGTGCAGAGAACCTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAGCACAGGAAATGAAAATCCAAGGGTGCAGAGAACCTCTCTC  375

seq1  ATTTACCAAGACAAACACTAGGGAAGTATGTAGAGAACCAGAAACAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCAAGACAAACACTAGGGAAGTATGTAGAGAACCAGAAACAGCCA  425

seq1  TTTGTTCAACTGCCTTGAAGGATTCATTATCCTGGCAGTGCTCCTCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAACTGCCTTGAAGGATTCATTATCCTGGCAGTGCTCCTCTTGG  475

seq1  GAACATAGTAGGGCAGGTGGTAATGACAAATTGTTGATTCAGACCTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAGTAGGGCAGGTGGTAATGACAAATTGTTGATTCAGACCTCAGA  525

seq1  CGCCTGGCACAGGCTTCCCATAGGTCACAGACTGGAGTTACACTTGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGGCACAGGCTTCCCATAGGTCACAGACTGGAGTTACACTTGAGAA  575

seq1  TAAGCTCACAGCATCCTTTAGAGCCCCCACAGAATACAGAGCTAGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCACAGCATCCTTTAGAGCCCCCACAGAATACAGAGCTAGACAGG  625

seq1  ACATTGATTACAAACTAAAGGTAATTGGTAACATTGTTCTCATTCCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGATTACAAACTAAAGGTAATTGGTAACATTGTTCTCATTCCATTA  675

seq1  ACTTGTGGGAATTCAGGACCACTCTGAACACAAAAGAGTGAAAGTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGGGAATTCAGGACCACTCTGAACACAAAAGAGTGAAAGTGAAGA  725

seq1  AGACACGTGATTTGATCTTCCTGTTTACCAATGATGAGACTTTCTGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGTGATTTGATCTTCCTGTTTACCAATGATGAGACTTTCTGAAGA  775

seq1  GCAGAGCTGAATGCGTTCGATTCCTGACTACTGTCTCTAAGCAGGGCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTGAATGCGTTCGATTCCTGACTACTGTCTCTAAGCAGGGCACT  825

seq1  CATCATGCATTAATTAAATCATCTAATTCTAAATAACCTTTCTGCGGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGCATTAATTAAATCATCTAATTCTAAATAACCTTTCTGCGGGTA  875

seq1  ACTTACCTAAGTTTGGAGTTGTTTGGTTGGTTAGTTGCTTGGTTTATTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCTAAGTTTGGAGTTGTTTGGTTGGTTAGTTGCTTGGTTTATTTT  925

seq1  TGTTTTGCTTTTTAAATCAAAGAAATATGGCAATATAGTTTCATTTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCTTTTTAAATCAAAGAAATATGGCAATATAGTTTCATTTTAAT  975

seq1  CCCATGTGTGGGATAGGGCCTGCTTCAGATCTGATTGCTTCAGATAAGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTGTGGGATAGGGCCTGCTTCAGATCTGATTGCTTCAGATAAGCA  1025

seq1  CAAGGCAAATTGACTATGATTTGCCTCATGCTCTAATAGGGGTGTGATTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAATTGACTATGATTTGCCTCATGCTCTAATAGGGGTGTGATTT  1075

seq1  TTGTCAGTGATAGATTCTGCAACTGTGTGGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTGATAGATTCTGCAACTGTGTGGAATTC  1110

seq1: chr10_21163499_21164230
seq2: B6Ng01-153F20.g_68_802

seq1  GAATTCATGTCCTAGCAGGGGACATAATTAGCCAGTAATGAGAGGCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCCTAGCAGGGGACATAATTAGCCAGTAATGAGAGGCTGTC  50

seq1  CTGAGGGGCGTCCTGAAACCTCTGTGGAAGTGTTGTGGGACAGACGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGGCGTCCTGAAACCTCTGTGGAAGTGTTGTGGGACAGACGGCCT  100

seq1  GTTGTAATCCGTGGGATGGAAATGAGCTTCAGTGCTTAAAATGTTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATCCGTGGGATGGAAATGAGCTTCAGTGCTTAAAATGTTTCATA  150

seq1  ACTCCAAATCAGGCTGAGCCTCCTCCTGTCAGCCCACTGAGAGGCTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAATCAGGCTGAGCCTCCTCCTGTCAGCCCACTGAGAGGCTGTGC  200

seq1  CTGTGAGGGGAAGCGGCTGATGCTGTGGTCTTCTGGGGGAGGGGTGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGGGAAGCGGCTGATGCTGTGGTCTTCTGGGGGAGGGGTGGTGG  250

seq1  AGCCTGCTTTGTGCCTTGTAAAATATAAAGGCTTTCTGGTTCCATTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTTTGTGCCTTGTAAAATATAAAGGCTTTCTGGTTCCATTCCAT  300

seq1  CTTCTTAAAAGGAAAAGCTACATGTTATATTATTCCGTTTGTATGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAAAGGAAAAGCTACATGTTATATTATTCCGTTTGTATGAAAGG  350

seq1  TTGCAAATAAATGAGTCTCTGGAGACATGGAAGCCTAAGCTGGTGGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATAAATGAGTCTCTGGAGACATGGAAGCCTAAGCTGGTGGGTGT  400

seq1  GTGCACAGGGAGGAGAGGGGTAAGGCTTCTTGAATGTTTGGGAAGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAGGGAGGAGAGGGGTAAGGCTTCTTGAATGTTTGGGAAGGTAAA  450

seq1  AATGGCAGCTTTTGCTTCCTGTACGCCAGCCTCTGCTGGTGTGCCCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGCTTTTGCTTCCTGTACGCCAGCCTCTGCTGGTGTGCCCACCC  500

seq1  ATGCAGCCCTTGCTCCCTCTCCTGAAGTGAGTGCTAGCACACTCTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCCCTTGCTCCCTCTCCTGAAGTGAGTGCTAGCACACTCTTCCAG  550

seq1  CTTACAGACAAGGGACCCGAGGCTCAGAGGAGGATCCAGGACTAGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGACAAGGGACCCGAGGCTCAGAGGAGGATCCAGGACTAGTTCCT  600

seq1  TCATGGTCACACAGCTGGGATCCCTGCCTCACCATCTTGC-TTTAGCATT  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCATGGTCACACAGCTGGGATCCCTGCCTCACCATCTTGCTTTTAGCATT  650

seq1  GATACATAGACTGCAGGGCTTGGCTCTTTCTGCATTCAACTAAGGTCATT  699
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  GATACATAGACTGCAGGGCTTGGCTCTTTCTGCATTCATCTATGGTCATT  700

seq1  ACAG-TTTGGCCA-CCCAAAACACAGTGGTGAGAG  732
      |||| |||||||| |||||||||||||||||||||
seq2  ACAGTTTTGGCCACCCCAAAACACAGTGGTGAGAG  735