BAC Information

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BAC

Clone NameB6Ng01-153H15
Chromosome10 (Build37)
Map Location 101,719,096 - 101,865,998
singlet/doubletdoublet
Overlap geneMgat4c
Upstream genenone
Downstream geneLOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153H15.bB6Ng01-153H15.g
ACCDH948778DH948779
length1,032231
definitionDH948778|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H15, 5' end.DH948779|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,719,096 - 101,720,140)(101,865,768 - 101,865,998)
sequence
gaattcatactgaccttcccatatacaggtggggaacagcattgaaccga
tatcctgttttcaatgagctgtcagtaagctctgcagtgctttcaatggt
ttagaaggtaaagtaagaagtaacactttcatttacaagtaaggaaactt
gaagaatagatatagatagatagatagatagatagatagatagatagata
gatagatagatagacagacagacagaagtttgtcttttgcacaagtgata
actaattccgcgaggaccatcatttctcccagcttcagcatttgccagtt
gcttttgttctttgttgaggctgaggaaccacaagtttcccctttccata
ttcacacgtttgtcagtgttattgttcaagtcccatttaaacaaccatgt
tgatgtgatttcatgggtgtatcctgcctgtcatttctaggagacagaaa
ctaataacaccaaacttcctgttctgctggctcttcataatttttcttcc
tcttcttcagcaatgagccctgagccttcgctgccagaatcatgttgtag
gaaacataaaggagaaattatgcctccatgtggatcacaatttttcggga
ttttattctttttataagttaaattgcatagactaagccaaagagtctga
cattttctagagtgaacaggaaattgaaggaatttagacacactctgcag
caacagttaaccgattgtagccagaattcctttggtcagttttgtttagc
tgacattacacacgagtttacttaataactatgtaaatgaatgtgatatt
tatgtcaacatgtttaagcagtttttctatattagcacactttccaaacg
tgtattatgggctttatattaaagttatttaatgaaagacagaaaaatgt
tcattttgatactttgaaagcagaaatcaatggtataacagtgaacatat
ataacagatctcattagatagtgtatttgactcgaatccttcgagagcag
tcaatgcgctcttacccaccgagccatctcgc
ccctttatccataattagtaatgtgatcatttacaagtcactaaaacaca
gtttcatttttcttttatgtgaggtgtggtgtatgggtgcatacctgtat
gtgagtgtgtattttgtgaatttttgcatgtttgcatttatgtgtgtgtg
tggtgtatctctctctctctctctctctctctctctctctctctctgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101719096_101720140
seq2: B6Ng01-153H15.b_44_1075

seq1  GAATTCATACTGACCTTCCCATATACAGGTGGGGAACAGCATTGAACCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTGACCTTCCCATATACAGGTGGGGAACAGCATTGAACCGA  50

seq1  TATCCTGTTTTCAATGAGCTGTCAGTAAGCTCTGCAGTGCTTTCAATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTTTTCAATGAGCTGTCAGTAAGCTCTGCAGTGCTTTCAATGGT  100

seq1  TTAGAAGGTAAAGTAAGAAGTAACACTTTCATTTACAAGTAAGGAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGTAAAGTAAGAAGTAACACTTTCATTTACAAGTAAGGAAACTT  150

seq1  GAAGAATAGATATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATAGATATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  200

seq1  GATAGATAGATAGACAGACAGACAGAAGTTTGTCTTTTGCACAAGTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGACAGACAGACAGAAGTTTGTCTTTTGCACAAGTGATA  250

seq1  ACTAATTCCGCGAGGACCATCATTTCTCCCAGCTTCAGCATTTGCCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTCCGCGAGGACCATCATTTCTCCCAGCTTCAGCATTTGCCAGTT  300

seq1  GCTTTTGTTCTTTGTTGAGGCTGAGGAACCACAAGTTTCCCCTTTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTTCTTTGTTGAGGCTGAGGAACCACAAGTTTCCCCTTTCCATA  350

seq1  TTCACACGTTTGTCAGTGTTATTGTTCAAGTCCCATTTAAACAACCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACGTTTGTCAGTGTTATTGTTCAAGTCCCATTTAAACAACCATGT  400

seq1  TGATGTGATTTCATGGGTGTATCCTGCCTGTCATTTCTAGGAGACAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGATTTCATGGGTGTATCCTGCCTGTCATTTCTAGGAGACAGAAA  450

seq1  CTAATAACACCAAACTTCCTGTTCTGCTGGCTCTTCATAATTTTTCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACACCAAACTTCCTGTTCTGCTGGCTCTTCATAATTTTTCTTCC  500

seq1  TCTTCTTCAGCAATGAGCCCTGAGCCTTCGCTGCCAGAATCATGTTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCAGCAATGAGCCCTGAGCCTTCGCTGCCAGAATCATGTTGTAG  550

seq1  GAAACATAAAGGAGAAATTATGCCTCCATGTGGATCACAATTTTTCGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAAAGGAGAAATTATGCCTCCATGTGGATCACAATTTTTCGGGA  600

seq1  TTTTATTCTTTTTATAAGTTAAATTGCATAGACTAAGCCAAAGAGTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCTTTTTATAAGTTAAATTGCATAGACTAAGCCAAAGAGTCTGA  650

seq1  CATTTTCTAGAGTGAACAGGAAATTGAAGGAATTTAGACACACTCTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTAGAGTGAACAGGAAATTGAAGGAATTTAGACACACTCTGCAG  700

seq1  CAACAGTTAACCGATTGTAGCCAGAATTCCTTTGGTCAGTTTTGTTTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTAACCGATTGTAGCCAGAATTCCTTTGGTCAGTTTTGTTTAGC  750

seq1  TGACATTACAACACGAGTTTACTTAATAACTATGTAAATGAATGTGATAT  800
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  TGACATTAC-ACACGAGTTTACTTAATAACTATGTAAATGAATGTGATA-  798

seq1  TTTATGTCAACATGTTTAAGCAGTTTTTCTATATTAGCACACTTTCAAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTATGTCAACATGTTTAAGCAGTTTTTCTATATTAGCACACTTTCCAAA  848

seq1  CGTGTATTATGGGCTTTATATTTAAAGTTATTTTAATGAAAGACAGAAAA  900
      |||||||||||||||||||| ||||||||| ||||||||||||||| |||
seq2  CGTGTATTATGGGCTTTATA-TTAAAGTTA-TTTAATGAAAGACAG-AAA  895

seq1  AATGTTTCATTTTGATACTTTGAAAAGCAGAAATCAATGGTATAAACAGT  950
      |||| ||||||||||||||||| |||||||||||||||||||| ||||||
seq2  AATG-TTCATTTTGATACTTTG-AAAGCAGAAATCAATGGTAT-AACAGT  942

seq1  GAACATATATAACAGATCTCATTAAGATTAGTGTATTTGAACTCGAATCC  1000
      ||||||||||||||||||||||| ||| ||||||||||| ||||||||||
seq2  GAACATATATAACAGATCTCATT-AGA-TAGTGTATTTG-ACTCGAATCC  989

seq1  TTCAGAAGAGCAGTCAATGCGCTCTTACCCACTGAGCCATCTCGC  1045
      |||   |||||||||||||||||||||||||| ||||||||||||
seq2  TTC--GAGAGCAGTCAATGCGCTCTTACCCACCGAGCCATCTCGC  1032

seq1: chr10_101865768_101865998
seq2: B6Ng01-153H15.g_75_305 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGA  50

seq1  GAGAGAGAGAGAGAGAGAGAGAGATACACCACACACACACATAAATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGATACACCACACACACACATAAATGCAA  100

seq1  ACATGCAAAAATTCACAAAATACACACTCACATACAGGTATGCACCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAAAAATTCACAAAATACACACTCACATACAGGTATGCACCCATA  150

seq1  CACCACACCTCACATAAAAGAAAAATGAAACTGTGTTTTAGTGACTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACCTCACATAAAAGAAAAATGAAACTGTGTTTTAGTGACTTGTA  200

seq1  AATGATCACATTACTAATTATGGATAAAGGG  231
      |||||||||||||||||||||||||||||||
seq2  AATGATCACATTACTAATTATGGATAAAGGG  231