BAC Information

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BAC

Clone NameB6Ng01-153J17
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,903 - 104,054,36326,740,424 - 26,741,553
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153J17.bB6Ng01-153J17.g
ACCDH948873DH948874
length9731,126
definitionDH948873|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J17, 5' end.DH948874|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(26,740,424 - 26,741,553)
sequence
gaattctcacctgaggaacaccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagcagcagat
gctggcgaggatgtggaaaaagaggaacactcctccatagttggtgggat
tgcaagcttgtacaaccattctggaaatcagtctggtggttcctcaaaaa
aaaaaaatggacatagtactactggaggatcccgcaatacctctcctggg
catatatccagaagatgttccaaccagtaagaaggacacatgctccacta
tgttcatagcagccttacttataataccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatcttatatttacgcaatg
gagtacgactcggctattaaaaagaatgaatttaagaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatttgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatacaatttgtaaaacacatgaaactcaagaagaat
gaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaac
acccatggaggagatacagagacaaagtttgaagctgaggtgaaatgatg
gatgatctagagactgccatatcctgggatccatcccataatcagcctcc
aaacactgacactattgcatacacaagcaagattttgctgaaaggaccct
tatataggtgtctcttgtgagactatgccggggcctagcaaatacagaag
tggatgctcatagtcagctattgaatggatcacagggcccccatggagga
gctagagaagtacccaagagtta
gaattcagtatcatgcggcattttgagaaatgtagaaggagattactcgg
tgtttccaaggctgaatattatcccaaagctgccttgatcctggaaaaat
tgcatcaccaagatccaggagggataagggtagaaactgtatcatcttcc
aggttggaacgtcctctgtttgaacattcacctcaggagacccaaaaagc
ccctccaactgctgccaaccatggacccttaacatcccatctagatcaac
agcagagaaaccagaatgttcagccccatactttctgtttccatgcaaaa
ccccagcagaacagaacaattcaaggaactgggagaggctacctgcaatc
agacaccagcccaggaatgggcaagcatgcaccctggaagcagtctgaag
atgtaccctcaggacattcctgcttgagtgcaacaactgtgggccctgaa
tacagagtcccaccttcaatggccaaactaaccaacacattggaggtaaa
agaagacctacctcctgcatggagggtgagtctgggatccagtgagattc
ccaatgggcaagccatcaatattactctcaaggactttgagtctttagat
gccaaaagaagcccaggccatctccaaaaaacctactgctcaaaactcag
gggacttggttctaaaaataaaattagataataaacattgacttaaaacc
aaatgagcatccacagtcttggcctgtgagtcatcacccagatgcccccc
aatacagtacaccctgccaaggtcagcttacctttcacagaacctcactg
cccaactttcagaatggatggcaaaacctcaagacttcacagggattagg
taatcttctgagtagtgatcagattgtggagaactagggagtccagattc
cacaaggataggattgaagcaaagaaatgacattgtaattcctccccttg
agtgagaccacctgtttggaatcttgagagcttaagccaggagaaaggct
tgggaaagtagtcctttctatccgagctcatcagctcaagatatcagtca
gcttgaaattcgtctcccttaatatgcaggaaaagggagctctgctataa
tttccctcgaagaattctaccagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-153J17.b_45_515 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||| |||||| ||  | ||||||||||
seq2  TTTAATAGCCGAGTCGTACTCCATTGCGTAAATATAAGATATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGG-TATT  99

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||| ||||||||||||||| ||||||||||||||||||||||||| |||
seq2  ATAAGTAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACTGGT  149

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||||||||||||||| ||||||||||| ||||||||| 
seq2  TGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCGGGATCCTCCA  199

seq1  GTAGTACTATGTCCA-----ATTTTCTGACGAACCGCCAGACGGATTTCC  235
      |||||||||||||||      |||| ||| ||||| |||||| |||||||
seq2  GTAGTACTATGTCCATTTTTTTTTTTTGAGGAACCACCAGACTGATTTCC  249

seq1  AGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCT  285
      ||| ||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  AGAATGGTTGTACAAGCTTGCAATCCCACCAACTATGGAGGAGTGTTCCT  299

seq1  CTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTT  335
      |||| |||||||||||||||||||||||||    ||||||||||||||||
seq2  CTTTTTCCACATCCTCGCCAGCATCTGCTG----CTGAATTTTTGATCTT  345

seq1  AGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCA  395

seq1  TTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCC  435
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  TTTCCCTGATGATTAAGGATGCTGAACATTTTTTCAGGTGCTTCTCAGCC  445

seq1  ATTCGGTATTCCTCAGGTGAGAATTC  461
      ||||||| ||||||||||||||||||
seq2  ATTCGGTGTTCCTCAGGTGAGAATTC  471

seq1: chr1_26740424_26741553
seq2: B6Ng01-153J17.g_70_1195 (reverse)

seq1  TTTCTGGTGATATTCTTCGA-GGAACTTATAGCAGGAGCCTCCCTTTTTC  49
      ||||||||   ||||||||| |||| |||||||| ||| ||||| |||||
seq2  TTTCTGGTAGAATTCTTCGAGGGAAATTATAGCA-GAG-CTCCC-TTTTC  47

seq1  CTGCTATATTAAGGGAGGACTGACTCTCAAGCTTGGCTG-TATCCTTGAG  98
      |||| ||||||||||| ||| || | |||||| || ||| ||| ||||||
seq2  CTGC-ATATTAAGGGA-GAC-GAATTTCAAGC-TGACTGATAT-CTTGAG  92

seq1  CTGGATGGAGCTCGGGATAG-AAGGACTTACTCTCCCAAGCCTTTCTCCC  147
      || ||| |||||| |||||| |||||| |||| |||||||||||||| ||
seq2  CT-GAT-GAGCTC-GGATAGAAAGGAC-TACTTTCCCAAGCCTTTCT-CC  137

seq1  TGGCTTATGCTCTC-AGATTTCAAAACAGTGGTCCTCACTTCAAGGGGAG  196
      ||||||| |||||| ||||| ||||   ||||| ||||| ||||||||||
seq2  TGGCTTAAGCTCTCAAGATTCCAAACAGGTGGT-CTCAC-TCAAGGGGAG  185

seq1  GAAATACATTGTCA-TTCTTTGCTTCAATCCTATCCTTGTGGAATCTGAA  245
      ||| |||| ||||| ||||||||||||||||||||||||||||||||| |
seq2  GAATTACAATGTCATTTCTTTGCTTCAATCCTATCCTTGTGGAATCTGGA  235

seq1  CTCCCTAG-TCTCCACACTCTGATCACTACTCATGAGATTACCTAATCCC  294
      |||||||| |||||||| |||||||||||||||  |||||||||||||||
seq2  CTCCCTAGTTCTCCACAATCTGATCACTACTCAGAAGATTACCTAATCCC  285

seq1  TGTGAAGTCTTGAGGTTTTGCCATCCATTCTGAAAGTTGGGCAGTGA-GT  343
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTGAAGTCTTGAGGTTTTGCCATCCATTCTGAAAGTTGGGCAGTGAGGT  335

seq1  TCTGTG-AAGGTAAGCTGACCTTGGCAGGGTGTACTGTATT-GGGGGCAT  391
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTGTGAAAGGTAAGCTGACCTTGGCAGGGTGTACTGTATTGGGGGGCAT  385

seq1  CTGGGTGATGACTCACAGGCCAAGACTGTGGATGCTCATTTGGTTTTAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGATGACTCACAGGCCAAGACTGTGGATGCTCATTTGGTTTTAAG  435

seq1  TCAATG-TTATTATCTAATTTTATTTTTAGAACCAAGTCCCCTGAGTTTT  490
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTTATTATCTAATTTTATTTTTAGAACCAAGTCCCCTGAGTTTT  485

seq1  GAGCAGTAGG-TTTTTGGAGATGGCCTGGGCTTCTTTTGGCATCTAAAGA  539
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAGGTTTTTTGGAGATGGCCTGGGCTTCTTTTGGCATCTAAAGA  535

seq1  CTCAAAGTCCTTGAGAGTAATATTGATGGCTTGCCCATTGGGAATCTCAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTCCTTGAGAGTAATATTGATGGCTTGCCCATTGGGAATCTCAC  585

seq1  TGGATCCCAGACTCACCCTCCATGCAGGAGGTAGGTCTTCTTTTACCTCC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCCAGACTCACCCTCCATGCAGGAGGTAGGTCTTCTTTTACCTCC  635

seq1  AATGTGTTGGTTAGTTTGGCCATTGAAGGTGGGACTCTGTATTCAGGGCC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTGGTTAGTTTGGCCATTGAAGGTGGGACTCTGTATTCAGGGCC  685

seq1  CACAGTTGTTGCACTCAAGCAGGAATGTCCTGAGGGTACATCTTCAGACT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGTTGCACTCAAGCAGGAATGTCCTGAGGGTACATCTTCAGACT  735

seq1  GCTTCCAGGGTGCATGCTTGCCCATTCCTGGGCTGGTGTCTGATTGCAGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGGGTGCATGCTTGCCCATTCCTGGGCTGGTGTCTGATTGCAGG  785

seq1  TAGCCTCTCCCAGTTCCTTGAATTGTTCTGTTCTGCTGGGGTTTTGCATG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTCCCAGTTCCTTGAATTGTTCTGTTCTGCTGGGGTTTTGCATG  835

seq1  GAAACAGAAAGTATGGGGCTGAACATTCTGGTTTCTCTGCTGTTGATCTA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAAAGTATGGGGCTGAACATTCTGGTTTCTCTGCTGTTGATCTA  885

seq1  GATGGGATGTTAAGGGTCCATGGTTGGCAGCAGTTGGAGGGGCTTTTTGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATGTTAAGGGTCCATGGTTGGCAGCAGTTGGAGGGGCTTTTTGG  935

seq1  GTCTCCTGAGGTGAATGTTCAAACAGAGGACGTTCCAACCTGGAAGATGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGAGGTGAATGTTCAAACAGAGGACGTTCCAACCTGGAAGATGA  985

seq1  TACAGTTTCTACCCTTATCCCTCCTGGATCTTGGTGATGCAATTTTTCCA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTCTACCCTTATCCCTCCTGGATCTTGGTGATGCAATTTTTCCA  1035

seq1  GGATCAAGGCAGCTTTGGGATAATATTCAGCCTTGGAAACACCGAGTAAT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGGCAGCTTTGGGATAATATTCAGCCTTGGAAACACCGAGTAAT  1085

seq1  CTCCTTCTACATTTCTCAAAATGCCGCATGATGCTGAATTC  1130
      |||||||||||||||||||||||||||||||| ||||||||
seq2  CTCCTTCTACATTTCTCAAAATGCCGCATGATACTGAATTC  1126